Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 1.8e-303 1045.0 515 100.0
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 8.7e-253 876.7 486 89.7
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 1.1e-247 859.8 499 86.8
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 2.2e-227 792.3 482 80.9
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 2.4e-226 788.9 489 80.2
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 7.7e-225 783.9 490 79.0
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.7e-224 782.7 477 79.7
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 1.1e-223 780.0 475 80.6
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 1.9e-223 779.2 473 80.1
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 3.2e-223 778.5 481 79.2
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 1.2e-222 776.5 481 79.6
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 2.1e-222 775.8 477 79.2
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 5.2e-213 744.6 482 74.9
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 1.2e-212 743.4 482 74.7
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 2.4e-210 735.7 481 74.6
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 4.1e-210 734.9 478 75.1
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 7.0e-210 734.2 484 73.3
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 2.0e-209 732.6 485 73.4
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 2.2e-208 729.2 485 72.2
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 2.9e-208 728.8 486 73.3
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 8.5e-208 727.2 491 73.1
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.5e-207 726.5 482 73.0
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 2.5e-207 725.7 481 73.6
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 6.1e-206 721.1 488 73.2
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 6.1e-206 721.1 484 71.9
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 8.8e-205 717.2 475 74.3
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 8.8e-205 717.2 475 74.3
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 8.8e-205 717.2 480 73.3
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 8.8e-205 717.2 481 72.8
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 8.8e-205 717.2 482 73.2
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 4.4e-204 714.9 481 71.5
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 4.4e-204 714.9 478 71.8
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 9.8e-204 713.8 476 73.7
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.8e-203 712.2 477 72.5
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 2.8e-203 712.2 486 72.4
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 3.7e-203 711.8 446 76.9
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 1.4e-202 709.9 483 72.3
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 1.4e-202 709.9 480 72.9
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 3.1e-202 708.8 481 72.3
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 3.1e-202 708.8 484 71.1
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 5.4e-202 708.0 483 71.8
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 9.1e-202 707.2 479 72.4
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 9.1e-202 707.2 513 69.0
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 1.6e-201 706.4 476 73.3
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 5.9e-201 704.5 505 69.9
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.0e-200 703.7 481 72.1
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 1.0e-200 703.7 479 71.6
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 2.3e-200 702.6 485 70.1
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 2.9e-200 702.2 480 72.1
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 6.6e-200 701.0 479 71.2
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 8.6e-200 700.7 479 72.0
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 8.6e-200 700.7 484 71.1
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 3.3e-199 698.7 469 71.6
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 4.2e-199 698.4 479 71.2
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 5.5e-199 698.0 480 71.9
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 9.5e-199 697.2 485 70.3
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 3.6e-198 695.3 479 71.6
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 4.7e-198 694.9 490 70.0
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 6.1e-198 694.5 479 71.4
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 1.4e-197 693.3 490 69.8
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 3.0e-197 692.2 485 69.9
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 1.2e-196 690.3 479 71.0
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 2.0e-196 689.5 479 68.5
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 2.0e-196 689.5 489 69.7
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.6e-196 689.1 478 71.3
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 3.4e-196 688.7 478 70.7
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 4.4e-196 688.3 488 68.4
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 9.8e-196 687.2 459 72.5
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 2.8e-195 685.6 480 70.8
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 2.8e-195 685.6 511 67.5
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 4.9e-195 684.9 481 70.9
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 6.3e-195 684.5 484 67.1
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.1e-194 683.7 488 68.6
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 1.8e-194 682.9 453 73.7
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 2.4e-194 682.6 482 67.6
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 7.0e-194 681.0 486 68.1
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 9.2e-194 680.6 482 69.7
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 1.6e-193 679.9 484 67.6
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 1.3e-192 676.8 481 68.0
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 1.3e-192 676.8 484 66.9
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 1.7e-192 676.4 477 70.0
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.8e-192 675.2 488 67.6
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 5.0e-192 674.9 476 70.0
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 1.2e-190 670.2 485 68.5
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 1.6e-190 669.8 486 67.1
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 3.6e-190 668.7 620 56.8
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 4.7e-190 668.3 519 65.3
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 3.1e-189 665.6 502 64.5
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 2.6e-188 662.5 445 73.3
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 3.7e-187 658.7 472 69.7
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 6.4e-187 657.9 475 67.2
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 4.1e-186 655.2 544 62.3
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 5.4e-186 654.8 481 66.3
TPR.G15355 Trifolium pratense HOM05D004762 ORTHO05D005972 1.7e-184 649.8 386 82.6
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 3.0e-184 649.0 476 66.4
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 3.1e-181 639.0 445 69.7
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 8.9e-181 637.5 476 68.1
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 4.1e-170 602.1 456 63.8
Hma1.2p1_2705F.1_g327160 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.3e-168 597.0 384 76.3
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 1.4e-165 587.0 396 73.0
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 1.5e-164 583.6 400 70.8
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 1.5e-159 567.0 394 69.3
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 3.3e-151 539.3 483 58.0
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 6.2e-150 535.0 491 56.2
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 2.4e-149 533.1 458 58.5
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 4.0e-149 532.3 415 64.8
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 6.0e-145 518.5 467 57.4
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 1.3e-142 510.8 463 54.9
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 1.7e-139 500.4 448 58.7
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 1.9e-135 486.9 494 53.0
BcaC02g12136 Brassica carinata HOM05D004762 ORTHO05D005972 3.8e-131 472.6 391 63.2
Dinv21748 Davidia involucrata HOM05D004762 ORTHO05D005972 3.0e-128 463.0 295 74.6
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 3.4e-124 449.5 473 51.8
CARHR135230 Cardamine hirsuta HOM05D004762 ORTHO05D005972 3.6e-121 439.5 304 69.1
Sopen10g028440 Solanum pennellii HOM05D004762 ORTHO05D005972 1.8e-117 427.2 307 68.1
PSO017G2836 Papaver somniferum HOM05D004762 ORTHO05D005972 8.5e-107 391.7 253 68.4
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 6.1e-105 385.6 495 44.8
Os12g0583000 Oryza sativa ssp. japonica HOM05D004762 ORTHO05D005972 1.5e-103 380.9 278 67.3
Gohir.D06G056233 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.2e-96 355.9 275 67.6
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 5.7e-95 352.4 468 43.8
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 8.0e-89 332.0 559 38.3
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 7.5e-87 325.5 476 40.5
Gohir.D08G135600 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.5e-82 309.3 269 61.7
Gorai.004G138800 Gossypium raimondii HOM05D004762 ORTHO05D005972 5.5e-82 309.3 275 61.1
BraA04t18511Z Brassica rapa HOM05D004762 ORTHO05D001193 2.7e-68 263.8 258 55.0
Cpa.g.sc1441.3 Carica papaya HOM05D004762 ORTHO05D005972 1.7e-67 261.2 158 75.3
BcaB01g03555 Brassica carinata HOM05D004762 ORTHO05D005972 1.2e-63 248.4 194 66.0
Potri.015G093000 Populus trichocarpa HOM05D004762 ORTHO05D005972 9.8e-63 245.4 184 67.9
Aqoxy4G02491 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 3.6e-57 226.9 217 55.3
Aqoxy4G02490 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 1.1e-56 225.3 184 60.3
TAR633G0702 Trochodendron aralioides HOM05D003030 ORTHO05D003610 6.4e-54 216.1 139 76.3
A04p29970 Brassica napus HOM05D004762 ORTHO05D001193 9.2e-53 212.2 258 48.4
Phvul.010G113266 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 2.6e-47 194.1 116 76.7
Nitab4.5_0006049g0030 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.9e-43 180.3 118 75.4
SEGI_20752 Sequoiadendron giganteum HOM05D004762 ORTHO05D005972 1.9e-42 177.9 113 76.1
QL11p009420 Quercus lobata HOM05D004762 ORTHO05D005972 5.6e-42 176.4 102 88.2
Aqoxy4G02489 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 2.9e-38 164.1 106 76.4
EL10Ac2g03328 Beta vulgaris HOM05D004762 ORTHO05D005972 1.2e-36 158.7 106 76.4
BcaB06g29139 Brassica carinata HOM05D004762 ORTHO05D005972 1.2e-36 158.7 106 74.5
EL10Ac6g13956 Beta vulgaris HOM05D004762 ORTHO05D005972 2.8e-33 147.5 90 82.2
TPR.G10834 Trifolium pratense HOM05D004762 ORTHO05D005972 1.4e-32 145.2 101 70.3
Hma1.2p1_0812F.1_g222370 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.5e-31 141.7 375 29.1
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.8e-27 128.3 93 62.4
arahy.Tifrunner.gnm1.ann1.38D1EG Arachis hypogaea HOM05D005637 ORTHO05D006983 1.3e-25 122.1 66 89.4
arahy.Tifrunner.gnm1.ann1.SGI312 Arachis hypogaea HOM05D004762 ORTHO05D005972 2.1e-25 121.3 68 86.8
BcaC01g05421 Brassica carinata HOM05D002909 ORTHO05D000493 2.5e-21 107.8 71 78.9
C03p26800 Brassica napus HOM05D000223 ORTHO05D001193 2.5e-21 107.8 71 78.9
BolC3t15065H Brassica oleracea HOM05D000223 ORTHO05D001193 2.5e-21 107.8 71 78.9
EL10Ac6g14685 Beta vulgaris HOM05D004762 ORTHO05D005972 5.5e-21 106.7 102 57.8
SEGI_02041 Sequoiadendron giganteum HOM05D004762 ORTHO05D005972 1.0e-19 102.4 96 53.1
EL10Ac3g06411 Beta vulgaris HOM05D004762 ORTHO05D005972 1.0e-14 85.9 44 88.6
Nitab4.5_0004804g0050 Nicotiana tabacum HOM05D004762 ORTHO05D005972 6.7e-11 73.2 56 60.7
SMO200G0224 Selaginella moellendorffii HOM05D004141 ORTHO05D005416 1.1e-10 72.4 184 33.2
MD13G1267900 Malus domestica HOM05D004762 ORTHO05D005972 5.7e-10 70.1 41 80.5
Gohir.D05G318650 Gossypium hirsutum HOM05D004762 ORTHO05D005972 1.6e-09 68.6 37 89.2
Gorai.012G079400 Gossypium raimondii HOM05D004762 ORTHO05D046822 1.6e-09 68.6 37 89.2
Gohir.D07G108366 Gossypium hirsutum HOM05D004762 ORTHO05D046822 4.8e-09 67.0 37 86.5
GSVIVG01022727001 Vitis vinifera HOM05D004762 ORTHO05D005972 2.0e-07 61.6 51 56.9
Sed0021837 Sechium edule HOM05D004762 ORTHO05D005972 5.9e-07 60.1 43 67.4
Lsat_1_v5_gn_3_79340 Lactuca sativa HOM05D004762 ORTHO05D231769 7.7e-07 59.7 67 49.3
MD02G1220900 Malus domestica HOM05D004762 ORTHO05D005972 5.0e-06 57.0 38 65.8
BraA03t11487Z Brassica rapa HOM05D000223 ORTHO05D001193 8.5e-06 56.2 31 93.5
Haze_26741 Corylus avellana HOM05D004141 ORTHO05D005416 8.5e-06 56.2 283 26.1


User provided reference genes

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