Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 6.2e-296 1020.0 503 100.0
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 9.3e-284 979.5 524 93.7
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 4.4e-201 704.9 502 69.9
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 7.3e-196 687.6 494 70.0
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 7.1e-191 671.0 509 67.2
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.3e-189 666.8 509 66.2
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 5.6e-188 661.4 496 68.1
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 7.6e-185 651.0 490 67.6
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 9.6e-172 607.4 541 58.6
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 7.6e-169 597.8 545 58.2
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.9e-164 583.2 524 58.2
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.3e-163 580.5 542 56.8
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 1.6e-163 580.1 522 57.5
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 6.3e-163 578.2 489 61.6
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 1.1e-162 577.4 536 56.5
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.1e-162 577.4 510 58.4
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 2.0e-161 573.2 512 57.4
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.0e-161 573.2 534 56.4
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 4.5e-161 572.0 537 56.2
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.3e-160 570.5 528 57.6
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.9e-160 569.3 515 58.4
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 1.4e-159 567.0 524 56.9
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 9.3e-159 564.3 506 56.5
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.2e-158 563.9 503 57.1
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.7e-158 562.8 542 54.1
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 3.6e-158 562.4 521 56.4
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.3e-157 560.5 534 56.7
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 3.9e-157 558.9 526 55.5
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 5.1e-157 558.5 515 56.7
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 5.1e-157 558.5 525 56.4
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 1.1e-156 557.4 529 55.2
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.9e-156 556.6 533 53.8
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.5e-156 556.2 513 56.7
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 7.4e-156 554.7 559 53.1
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 9.7e-156 554.3 601 51.7
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 1.3e-155 553.9 504 56.3
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.6e-155 553.5 520 56.0
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.8e-155 552.7 544 51.8
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 2.8e-155 552.7 530 55.3
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 3.7e-155 552.4 526 54.8
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 5.3e-154 548.5 545 53.8
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 5.3e-154 548.5 536 54.5
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 1.2e-153 547.4 539 52.9
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 3.4e-153 545.8 540 52.0
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 5.9e-153 545.0 495 57.0
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.3e-152 543.9 522 53.4
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 2.9e-152 542.7 514 55.8
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 7.2e-151 538.1 595 50.9
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.0e-148 530.0 503 54.1
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.3e-148 529.3 521 52.8
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.8e-147 526.2 546 51.5
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 2.8e-147 526.2 503 53.1
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 4.5e-145 518.8 566 49.5
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 5.9e-145 518.5 546 52.0
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 7.7e-145 518.1 485 55.1
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.0e-144 517.7 480 56.2
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 2.9e-144 516.2 485 54.4
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.5e-143 513.1 415 62.4
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 5.5e-143 511.9 485 55.1
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 3.6e-142 509.2 512 52.3
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 3.6e-142 509.2 460 57.6
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 4.7e-142 508.8 513 52.0
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.4e-141 507.3 487 55.0
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.8e-141 506.9 484 53.9
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 3.0e-141 506.1 465 57.6
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 3.0e-141 506.1 509 53.6
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.1e-140 504.2 414 62.6
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 2.0e-140 503.4 505 53.1
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 3.3e-140 502.7 486 53.7
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-139 500.7 486 52.9
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 2.2e-139 500.0 486 52.9
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 4.8e-139 498.8 483 53.2
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 4.8e-139 498.8 543 50.8
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 6.3e-139 498.4 484 53.5
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-138 497.3 484 53.3
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 1.4e-138 497.3 484 53.3
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.8e-138 496.9 484 53.1
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 7.0e-138 495.0 488 53.3
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 9.1e-138 494.6 315 77.8
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 2.0e-137 493.4 486 52.9
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.1e-135 487.6 447 55.3
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.9e-135 486.9 510 50.4
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 4.2e-135 485.7 507 51.3
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 9.4e-135 484.6 566 49.3
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 4.4e-132 475.7 502 51.6
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 9.7e-132 474.6 508 50.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.2e-131 473.4 512 49.8
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 6.3e-131 471.9 516 50.0
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-130 470.3 516 51.4
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 2.0e-129 466.8 461 54.4
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.6e-126 457.2 517 49.3
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.4e-125 454.1 471 52.0
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 3.4e-124 449.5 529 46.9
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.0e-117 427.9 380 59.5
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 8.9e-117 424.9 353 60.3
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.1e-111 407.9 252 76.2
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 4.1e-106 389.4 546 40.7
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.2e-105 387.9 545 42.2
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 3.0e-104 383.3 250 72.0
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 3.1e-101 373.2 533 40.0
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 2.3e-88 330.5 428 45.6
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 2.5e-87 327.0 216 71.8
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 6.2e-86 322.4 379 47.5
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 1.2e-84 318.2 284 57.7
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 9.0e-77 292.0 249 60.2
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 1.2e-76 291.6 250 55.2
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 4.6e-73 279.6 457 37.6
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 2.2e-67 260.8 247 55.5
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 1.5e-52 211.5 246 44.7
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.3e-48 198.4 463 30.7
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 2.3e-40 171.0 167 52.7
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.7e-38 164.9 207 46.9
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.2e-38 164.5 238 39.9
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.0e-35 155.6 164 51.2
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 9.1e-29 132.5 187 39.0
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.7e-27 128.3 107 64.5
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 4.2e-26 123.6 196 38.3
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 9.4e-26 122.5 128 48.4
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 6.3e-22 109.8 140 42.9
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.4e-21 108.6 199 36.2
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.6e-20 104.4 148 42.6
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 2.5e-18 97.8 46 93.5
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.2e-18 97.4 140 36.4
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 4.2e-18 97.1 314 26.4
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.2e-16 90.1 101 43.6
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.5e-15 88.6 126 38.9
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.4e-13 82.0 61 62.3
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 4.5e-12 77.0 147 34.0
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 4.5e-12 77.0 86 46.5
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 6.5e-11 73.2 156 34.6
Psat1g150120 Pisum sativum HOM05D003313 ORTHO05D004217 1.5e-10 72.0 82 47.6
Psat5g202200 Pisum sativum HOM05D001594 ORTHO05D002862 1.9e-10 71.6 83 42.2
Psat5g202120 Pisum sativum HOM05D001594 ORTHO05D002862 9.4e-10 69.3 152 33.6
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-08 65.1 112 34.8
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 8.8e-08 62.8 38 73.7


User provided reference genes

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