Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 1.4e-254 882.5 449 100.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.0e-204 716.8 606 68.0
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.7e-204 716.1 606 67.8
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.5e-203 712.2 606 67.7
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.8e-191 671.4 605 65.5
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 9.2e-150 534.3 344 82.8
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.8e-145 520.0 578 53.3
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 5.3e-145 518.5 579 52.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.2e-144 517.3 570 53.7
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 9.9e-144 514.2 579 51.6
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 8.4e-143 511.1 578 51.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 4.2e-142 508.8 551 53.9
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 6.6e-140 501.5 575 52.5
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.6e-138 496.9 577 51.6
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.2e-127 459.9 566 49.8
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 2.5e-107 393.3 559 44.2
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.3e-107 392.9 563 42.5
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 1.1e-105 387.9 558 42.8
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 2.2e-103 380.2 566 41.5
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 9.4e-102 374.8 643 39.3
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.2e-98 363.6 562 41.3
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.8e-98 363.2 560 39.1
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.8e-97 360.5 561 42.1
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 2.4e-97 360.1 556 40.8
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 7.0e-97 358.6 559 40.3
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 3.5e-96 356.3 554 41.3
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 2.2e-95 353.6 516 41.7
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 3.8e-95 352.8 554 40.4
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 5.0e-95 352.4 571 39.1
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 2.7e-93 346.7 556 37.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 3.6e-93 346.3 563 37.7
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.6e-93 346.3 573 39.8
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.8e-92 344.0 561 38.5
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.5e-91 340.9 565 37.7
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.6e-91 340.1 542 38.6
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 3.3e-91 339.7 539 40.4
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.7e-90 336.3 573 39.1
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.8e-89 334.0 555 37.5
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 3.1e-89 333.2 608 35.7
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 5.3e-89 332.4 555 37.3
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 4.5e-88 329.3 560 38.2
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.7e-87 327.4 569 37.6
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 6.5e-87 325.5 549 37.0
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 4.0e-84 316.2 561 36.7
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 9.7e-83 311.6 557 36.3
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.7e-82 310.8 561 38.9
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 2.2e-82 310.5 557 35.9
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.8e-82 310.1 560 38.2
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.1e-81 306.6 560 35.5
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 5.3e-81 305.8 569 36.7
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 7.0e-81 305.4 560 37.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.5e-80 303.1 516 37.6
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 1.5e-78 297.7 518 39.0
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.2e-78 296.2 567 35.6
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.2e-77 294.7 561 34.9
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.1e-77 293.9 558 34.9
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 2.7e-77 293.5 580 34.7
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.8e-76 290.8 500 38.2
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 6.8e-76 288.9 577 35.0
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.2e-75 288.1 621 32.5
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 9.8e-75 285.0 534 37.3
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.3e-74 284.6 550 34.0
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.8e-74 283.5 531 36.9
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.7e-74 283.1 554 34.8
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 6.3e-74 282.3 627 31.7
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.4e-73 281.2 562 34.7
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.3e-71 274.6 578 34.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 3.3e-70 270.0 570 33.3
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 2.8e-69 266.9 551 34.8
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 3.4e-67 260.0 419 39.4
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 2.0e-64 250.8 557 33.2
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.3e-63 247.3 556 31.3
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 6.6e-63 245.7 577 32.1
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 6.6e-63 245.7 580 31.7
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.1e-62 245.0 283 49.8
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.5e-62 244.6 484 36.2
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.5e-62 244.6 566 32.2
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.5e-62 244.6 586 31.9
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 3.6e-61 240.0 541 33.6
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.3e-60 237.3 533 32.3
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 6.8e-60 235.7 582 30.9
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.4e-59 233.4 433 36.5
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 4.9e-58 229.6 565 30.3
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 6.4e-58 229.2 566 30.2
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.1e-57 228.4 566 30.6
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 4.6e-56 223.0 545 31.2
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 4.6e-56 223.0 565 30.4
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 2.5e-54 217.2 489 33.1
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 9.5e-54 215.3 387 36.2
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.2e-53 214.9 523 30.8
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.6e-53 213.4 323 40.6
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 6.2e-53 212.6 393 35.9
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.8e-52 211.1 329 39.8
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.0e-51 207.6 570 28.9
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 7.5e-51 205.7 495 32.1
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 9.8e-51 205.3 329 39.2
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.4e-49 201.4 519 30.3
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.6e-45 186.8 303 38.6
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 8.9e-44 182.2 577 26.5
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.6e-37 161.4 151 55.0
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 2.7e-24 117.5 230 32.2
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 3.9e-23 113.6 172 37.8
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.5e-19 101.7 153 37.3
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.5e-19 101.7 177 35.0
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 2.0e-19 101.3 148 39.9
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.0e-19 101.3 136 44.1
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 3.8e-18 97.1 96 53.1
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.2e-17 93.6 58 77.6
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 7.1e-17 92.8 165 36.4
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 3.0e-15 87.4 159 39.0
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 2.8e-13 80.9 154 33.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.4e-12 77.8 176 32.4
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 5.3e-12 76.6 96 40.6
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 6.9e-12 76.3 134 34.3
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.4e-09 68.6 125 34.4
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 7.1e-09 66.2 51 60.8
MELO3C031505.2 Cucumis melo HOM05D006351 ORTHO05D007796 9.3e-09 65.9 104 37.5
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 7.9e-08 62.8 169 29.0


User provided reference genes

Program Settings