Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.UST23B Arachis hypogaea HOM05D005315 ORTHO05D006589 1.0e-91 340.1 177 100.0
arahy.Tifrunner.gnm1.ann1.NZ3ZKL Arachis hypogaea HOM05D005315 ORTHO05D006589 2.1e-52 209.5 295 49.2
arahy.Tifrunner.gnm1.ann1.EUG2WG Arachis hypogaea HOM05D005315 ORTHO05D006589 6.0e-52 208.0 295 48.8
Phvul.001G203400 Phaseolus vulgaris HOM05D005315 ORTHO05D006589 8.9e-48 194.1 294 45.6
VMungo1383G1398 Vigna mungo HOM05D005315 ORTHO05D006589 9.9e-47 190.7 294 45.2
Lalb_Chr04g0259741 Lupinus albus HOM05D005315 ORTHO05D006589 3.8e-46 188.7 294 43.5
Glyma.03G210300 Glycine max HOM05D005315 ORTHO05D006589 6.4e-46 188.0 294 45.2
Glyma.19G207500 Glycine max HOM05D005315 ORTHO05D006589 1.4e-45 186.8 294 44.6
Duzib138G1810 Durio zibethinus HOM05D005315 ORTHO05D006589 5.4e-45 184.9 292 43.5
QL10p015953 Quercus lobata HOM05D005315 ORTHO05D006589 1.2e-44 183.7 295 43.4
Thecc.01G292600 Theobroma cacao HOM05D005315 ORTHO05D006589 2.7e-44 182.6 292 42.1
Duzib133G0389 Durio zibethinus HOM05D005315 ORTHO05D006589 3.5e-44 182.2 259 45.6
QL12p024404 Quercus lobata HOM05D005315 ORTHO05D006589 3.5e-44 182.2 295 43.1
Ca_09122_v3 Cicer arietinum L. HOM05D005315 ORTHO05D006589 7.8e-44 181.0 294 43.9
MD03G1278200 Malus domestica HOM05D005315 ORTHO05D006589 7.8e-44 181.0 291 43.3
Lj1g0005840 Lotus japonicus HOM05D005315 ORTHO05D006589 1.0e-43 180.6 294 42.9
COL.COLO4_08010 Corchorus olitorius HOM05D005315 ORTHO05D006589 1.3e-43 180.3 287 43.6
Peaxi162Scf01132g00228 Petunia axillaris HOM05D005315 ORTHO05D006589 1.3e-43 180.3 295 42.4
Nitab4.5_0008505g0010 Nicotiana tabacum HOM05D005315 ORTHO05D006589 2.3e-43 179.5 295 42.4
Cc07_g16220 Coffea canephora HOM05D005315 ORTHO05D006589 3.0e-43 179.1 257 45.5
DCAR_003965 Daucus carota HOM05D005315 ORTHO05D006589 3.0e-43 179.1 294 42.5
Medtr7g108240 Medicago truncatula HOM05D005315 ORTHO05D006589 3.9e-43 178.7 287 44.3
Prupe.8G254400 Prunus persica HOM05D005315 ORTHO05D006589 3.9e-43 178.7 292 43.2
CSS0021362 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 5.1e-43 178.3 295 42.0
CSS0027333 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 5.1e-43 178.3 295 42.0
CAN.G276.6 Capsicum annuum HOM05D005315 ORTHO05D006589 6.6e-43 177.9 297 41.4
Medtr4g104580 Medicago truncatula HOM05D005315 ORTHO05D006589 8.7e-43 177.6 292 43.5
Gohir.A08G116900 Gossypium hirsutum HOM05D005315 ORTHO05D006589 1.1e-42 177.2 290 41.7
Nitab4.5_0000492g0210 Nicotiana tabacum HOM05D005315 ORTHO05D006589 1.1e-42 177.2 295 42.4
TPR.G32271 Trifolium pratense HOM05D005315 ORTHO05D006589 1.1e-42 177.2 292 42.8
TWI59G0122 Tripterygium wilfordii HOM05D005315 ORTHO05D006589 1.1e-42 177.2 294 42.2
Cfa006013 Carpinus fangiana HOM05D005315 ORTHO05D006589 1.5e-42 176.8 292 42.5
Potri.014G134100 Populus trichocarpa HOM05D005315 ORTHO05D006589 1.5e-42 176.8 292 42.1
Gorai.004G141000 Gossypium raimondii HOM05D005315 ORTHO05D006589 1.9e-42 176.4 290 41.4
Nitab4.5_0000431g0150 Nicotiana tabacum HOM05D005315 ORTHO05D006589 1.9e-42 176.4 293 42.0
Sabra14G0100000 Salix brachista HOM05D005315 ORTHO05D006589 2.5e-42 176.0 292 41.8
Gohir.D08G137700 Gossypium hirsutum HOM05D005315 ORTHO05D006589 4.3e-42 175.3 290 41.4
Nitab4.5_0013619g0010 Nicotiana tabacum HOM05D005315 ORTHO05D008125 4.3e-42 175.3 293 41.6
PSO210G5824 Papaver somniferum HOM05D005315 ORTHO05D006589 4.3e-42 175.3 291 40.9
Psat3g025640 Pisum sativum HOM05D005315 ORTHO05D006589 4.3e-42 175.3 291 42.6
Prupe.2G090200 Prunus persica HOM05D005315 ORTHO05D006589 4.3e-42 175.3 292 42.5
Hund18046 Selenicereus undatus HOM05D005315 ORTHO05D006589 4.3e-42 175.3 292 42.5
Hma1.2p1_0399F.1_g144060 Hydrangea macrophylla HOM05D005315 ORTHO05D006589 5.6e-42 174.9 283 42.4
AUR62029964 Chenopodium quinoa HOM05D005315 ORTHO05D006589 9.6e-42 174.1 296 40.5
PSO170G6158 Papaver somniferum HOM05D005315 ORTHO05D006589 9.6e-42 174.1 291 41.2
EL10Ac1g00719 Beta vulgaris HOM05D005315 ORTHO05D006589 1.3e-41 173.7 295 42.7
ClCG09G006320 Citrullus lanatus HOM05D005315 ORTHO05D006589 1.3e-41 173.7 294 42.9
AUR62002550 Chenopodium quinoa HOM05D005315 ORTHO05D006589 2.1e-41 172.9 296 40.5
Sopen04g023370 Solanum pennellii HOM05D005315 ORTHO05D006589 2.1e-41 172.9 301 40.9
MELO3C016054.2 Cucumis melo HOM05D005315 ORTHO05D006589 2.8e-41 172.6 293 42.7
Lj6A760G44 Lonicera japonica HOM05D005315 ORTHO05D006589 2.8e-41 172.6 288 42.4
MD11G1300200 Malus domestica HOM05D005315 ORTHO05D006589 2.8e-41 172.6 292 42.5
CiPaw.07G101900 Carya illinoinensis HOM05D005315 ORTHO05D006589 3.6e-41 172.2 292 41.8
CANSAT25G3366 Cannabis sativa HOM05D005315 ORTHO05D006589 4.8e-41 171.8 293 41.0
Nn1g09466 Nelumbo nucifera HOM05D005315 ORTHO05D006589 4.8e-41 171.8 292 40.1
Dinv33007 Davidia involucrata HOM05D005315 ORTHO05D006589 1.1e-40 170.6 294 41.5
Eucgr.K03447 Eucalyptus grandis HOM05D005315 ORTHO05D006589 1.1e-40 170.6 292 40.8
Sed0018657 Sechium edule HOM05D005315 ORTHO05D006589 1.1e-40 170.6 294 41.8
Solyc04g053080.4 Solanum lycopersicum HOM05D005315 ORTHO05D006589 1.1e-40 170.6 299 40.8
Manes.01G214900 Manihot esculenta HOM05D005315 ORTHO05D006589 1.8e-40 169.9 293 39.9
vmacro02497 Vaccinium macrocarpon HOM05D005315 ORTHO05D006589 1.8e-40 169.9 296 40.9
Sc24g0001270 Simmondsia chinensis HOM05D005315 ORTHO05D006589 3.1e-40 169.1 291 39.9
Ciclev10021031m.g Citrus clementina HOM05D005315 ORTHO05D006589 6.9e-40 167.9 292 40.8
MSTRG.16494 Avicennia marina HOM05D005315 ORTHO05D006589 9.0e-40 167.5 292 39.7
Manes.05G066800 Manihot esculenta HOM05D005315 ORTHO05D006589 9.0e-40 167.5 296 39.2
Rhsim13G0016000 Rhododendron simsii HOM05D005315 ORTHO05D006589 9.0e-40 167.5 296 40.9
RcHm_v2.0_Chr6g0292881 Rosa chinensis HOM05D005315 ORTHO05D006589 9.0e-40 167.5 295 40.7
Aqoxy2G03077 Aquilegia oxysepala HOM05D005315 ORTHO05D006589 1.5e-39 166.8 292 39.0
Sed0022397 Sechium edule HOM05D005315 ORTHO05D006589 1.5e-39 166.8 294 40.8
FAN20G2356 Fragaria x ananassa HOM05D005315 ORTHO05D006589 3.4e-39 165.6 293 39.9
Atru.chr4.1184 Acer truncatum HOM05D005315 ORTHO05D006589 7.6e-39 164.5 292 40.1
FvH4_2g14201 Fragaria vesca HOM05D005315 ORTHO05D006589 7.6e-39 164.5 293 39.9
FAN24G2129 Fragaria x ananassa HOM05D005315 ORTHO05D006589 7.6e-39 164.5 293 39.9
PGSC0003DMG400016587 Solanum tuberosum HOM05D005315 ORTHO05D006589 1.3e-38 163.7 280 40.4
GSVIVG01010986001 Vitis vinifera HOM05D005315 ORTHO05D006589 1.7e-38 163.3 216 48.6
PGR044G2036 Punica granatum HOM05D005315 ORTHO05D006589 2.9e-38 162.5 292 40.8
CsaV3_7G028820 Cucumis sativus L. HOM05D005315 ORTHO05D006589 3.8e-38 162.2 293 42.0
Oeu028371.1 Olea europaea HOM05D005315 ORTHO05D006589 8.4e-38 161.0 294 39.5
Carub.0005s2959 Capsella rubella HOM05D005315 ORTHO05D006589 1.4e-37 160.2 295 40.0
A09p54790 Brassica napus HOM05D005315 ORTHO05D006589 2.4e-37 159.5 297 39.7
BcaB02g08087 Brassica carinata HOM05D005315 ORTHO05D006589 3.2e-37 159.1 299 39.8
MBI02_g41662_MAGBIO Magnolia biondii HOM05D005315 ORTHO05D006589 3.2e-37 159.1 251 41.8
BcaC02g10325 Brassica carinata HOM05D005315 ORTHO05D006589 5.4e-37 158.3 295 40.0
C04p30300 Brassica napus HOM05D005315 ORTHO05D006589 5.4e-37 158.3 295 40.0
C08p37650 Brassica napus HOM05D005315 ORTHO05D006589 5.4e-37 158.3 296 39.9
BolC4t24563H Brassica oleracea HOM05D005315 ORTHO05D006589 5.4e-37 158.3 295 40.0
Aa31LG10G16750 Aethionema arabicum HOM05D005315 ORTHO05D006589 7.1e-37 157.9 295 39.7
Hma1.2p1_0209F.1_g088950 Hydrangea macrophylla HOM05D005315 ORTHO05D006589 7.1e-37 157.9 270 41.1
BraA09t40888Z Brassica rapa HOM05D005315 ORTHO05D006589 9.3e-37 157.5 297 39.4
BolC8t51348H Brassica oleracea HOM05D005315 ORTHO05D006589 1.2e-36 157.1 294 39.8
unitig_26.g9038 Utricularia gibba HOM05D005315 ORTHO05D006589 1.6e-36 156.8 294 39.5
Haze_04835 Corylus avellana HOM05D005315 ORTHO05D006589 2.7e-36 156.0 283 41.0
Thhalv10006094m.g Eutrema salsugineum HOM05D005315 ORTHO05D006589 2.7e-36 156.0 302 38.7
Sp5g00580 Schrenkiella parvula HOM05D005315 ORTHO05D006589 3.5e-36 155.6 302 38.7
A04p00430 Brassica napus HOM05D005315 ORTHO05D006589 1.7e-35 153.3 299 39.1
BraA04t15762Z Brassica rapa HOM05D005315 ORTHO05D006589 1.7e-35 153.3 299 39.1
ATR0665G323 Amborella trichopoda HOM05D005315 ORTHO05D006589 2.3e-35 152.9 290 37.6
SGA_v2.0_scaffold304G47908 Striga asiatica HOM05D005315 ORTHO05D006589 6.6e-35 151.4 294 38.8
Ah.12g052040 Amaranthus hybridus HOM05D005315 ORTHO05D006589 1.1e-34 150.6 219 47.0
CARHR173230 Cardamine hirsuta HOM05D005315 ORTHO05D006589 1.1e-34 150.6 299 38.1
Zm00001eb212540 Zea mays HOM05D005315 ORTHO05D006589 1.9e-34 149.8 292 37.7
ATR0564G214 Amborella trichopoda HOM05D005315 ORTHO05D006589 4.3e-34 148.7 291 36.4
AT3G62940 Arabidopsis thaliana HOM05D005315 ORTHO05D006589 7.3e-34 147.9 299 37.5
HPP92_002250 Vanilla planifolia HOM05D005315 ORTHO05D006589 1.6e-33 146.7 292 37.3
Lsat_1_v5_gn_5_90141 Lactuca sativa HOM05D005315 ORTHO05D006589 3.1e-32 142.5 273 37.7
AL5G45720 Arabidopsis lyrata HOM05D005315 ORTHO05D006589 4.0e-32 142.1 298 36.6
HanXRQChr12g0357681 Helianthus annuus HOM05D005315 ORTHO05D006589 5.3e-32 141.7 295 36.9
Migut.B00780 Erythranthe guttata HOM05D005315 ORTHO05D006589 6.9e-32 141.4 294 37.1
Gorai.008G008700 Gossypium raimondii HOM05D005315 ORTHO05D006589 3.4e-31 139.0 291 36.4
Nn1g09463 Nelumbo nucifera HOM05D005315 ORTHO05D006589 3.4e-31 139.0 196 42.3
ECA247G4081 Erigeron canadensis HOM05D005315 ORTHO05D006589 9.9e-31 137.5 299 37.5
Cpa.g.sc9.185 Carica papaya HOM05D005315 ORTHO05D006589 6.4e-30 134.8 277 36.8
HanXRQChr16g0511311 Helianthus annuus HOM05D005315 ORTHO05D006589 6.4e-30 134.8 172 49.4
Mapoly0036s0154 Marchantia polymorpha HOM05D005315 ORTHO05D006589 6.4e-30 134.8 292 35.3
Gohir.D12G008800 Gossypium hirsutum HOM05D005315 ORTHO05D006589 8.4e-30 134.4 214 42.5
ECA234G3298 Erigeron canadensis HOM05D005315 ORTHO05D006589 1.4e-29 133.7 296 36.5
SEGI_33648 Sequoiadendron giganteum HOM05D005315 ORTHO05D006589 1.4e-29 133.7 288 35.1
Pp3c15_4060 Physcomitrium patens HOM05D005315 ORTHO05D006589 4.2e-29 132.1 292 34.9
Os04g0619500 Oryza sativa ssp. japonica HOM05D005315 ORTHO05D006589 1.8e-27 126.7 292 34.9
AagrBONN_evm.TU.Sc2ySwM_228.5144 Anthoceros agrestis HOM05D005315 ORTHO05D006589 3.0e-27 125.9 290 35.2
MBI13_g04790_MAGBIO Magnolia biondii HOM05D005315 ORTHO05D006589 3.9e-27 125.6 139 51.1
THA.LOC104802209 Tarenaya hassleriana HOM05D005315 ORTHO05D006589 4.3e-26 122.1 257 36.6
SMO196G0226 Selaginella moellendorffii HOM05D005315 ORTHO05D006589 3.7e-25 119.0 284 33.5
CBR_g50012 Chara braunii HOM05D005315 ORTHO05D006589 8.1e-25 117.9 305 31.1
TAR369G0925 Trochodendron aralioides HOM05D005315 ORTHO05D006589 1.8e-19 100.1 129 45.7
Sc24g0001280 Simmondsia chinensis HOM05D005315 ORTHO05D006589 9.6e-18 94.4 111 47.7
Actinidia32232 Actinidia chinensis HOM05D005315 ORTHO05D006589 1.8e-16 90.1 221 35.3
SMO196G0254 Selaginella moellendorffii HOM05D005315 ORTHO05D006589 2.6e-15 86.3 132 42.4
MCO04G021 Micromonas commoda HOM05D005315 ORTHO05D006589 1.3e-14 84.0 207 32.4
Cre01.g028550 Chlamydomonas reinhardtii HOM05D005315 ORTHO05D006589 2.2e-14 83.2 194 33.0
PRCOL_00001709 Prasinoderma coloniale HOM05D005315 ORTHO05D006589 6.5e-14 81.6 218 28.4
EL10Ac3g06247 Beta vulgaris HOM05D005315 ORTHO05D006589 1.4e-13 80.5 183 35.5
SHI20216 Sapria himalayana HOM05D005315 ORTHO05D006589 5.7e-10 68.6 168 31.0
RcHm_v2.0_Chr3g0496291 Rosa chinensis HOM05D005315 ORTHO05D006589 3.1e-08 62.8 161 32.3
BcaB02g07311 Brassica carinata HOM05D005315 ORTHO05D006589 4.1e-08 62.4 73 52.1
RcHm_v2.0_Chr5g0001231 Rosa chinensis HOM05D005315 ORTHO05D006589 4.1e-08 62.4 104 38.5
CSS0017761 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 4.5e-07 58.9 54 64.8
CSS0041271 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 4.5e-07 58.9 54 64.8


User provided reference genes

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