Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 6.2e-92 340.9 185 100.0
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 5.3e-75 284.6 185 88.6
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.6e-55 219.9 196 59.2
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 3.5e-55 218.8 185 62.7
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 3.3e-53 212.2 184 63.0
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 3.7e-52 208.8 185 61.1
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 9.0e-51 204.1 185 60.5
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 2.0e-50 203.0 185 60.5
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 5.0e-49 198.4 170 59.4
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 5.0e-49 198.4 186 59.1
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 6.5e-49 198.0 185 58.9
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 4.2e-48 195.3 181 55.8
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 7.2e-48 194.5 177 60.5
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 6.1e-47 191.4 185 54.1
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 2.2e-44 183.0 151 63.6
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 2.2e-44 183.0 173 53.8
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 4.1e-43 178.7 163 55.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 6.9e-43 177.9 181 54.7
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 2.0e-42 176.4 186 53.2
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.0e-41 174.1 185 53.5
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.3e-41 173.7 177 53.1
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 1.3e-41 173.7 164 56.1
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.2e-41 172.9 164 57.3
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 4.2e-40 168.7 165 54.5
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 7.2e-40 167.9 169 55.6
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 1.2e-39 167.2 178 49.4
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 6.1e-39 164.9 168 51.2
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 6.1e-39 164.9 168 51.2
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 6.1e-39 164.9 168 51.2
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 6.1e-39 164.9 168 51.2
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 6.1e-39 164.9 168 51.2
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 6.1e-39 164.9 183 53.0
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 7.9e-39 164.5 184 51.1
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.0e-38 164.1 156 57.1
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.0e-38 164.1 150 58.7
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 1.4e-38 163.7 157 54.8
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.8e-38 163.3 158 57.6
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.8e-38 163.3 179 52.5
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 2.3e-38 162.9 181 52.5
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 5.1e-38 161.8 178 52.2
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 5.1e-38 161.8 179 50.3
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.5e-37 160.2 186 48.4
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.5e-37 160.2 175 50.9
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.5e-37 160.2 155 54.8
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 2.6e-37 159.5 119 66.4
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 2.6e-37 159.5 178 48.3
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 3.3e-37 159.1 164 53.7
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 3.3e-37 159.1 182 50.5
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 4.4e-37 158.7 170 52.4
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.4e-37 158.7 170 50.0
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 5.7e-37 158.3 175 50.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-36 156.8 184 50.0
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 2.2e-36 156.4 185 47.6
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 3.7e-36 155.6 174 48.3
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 6.3e-36 154.8 174 47.7
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.4e-35 153.7 184 49.5
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 2.4e-35 152.9 181 50.8
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 3.1e-35 152.5 185 46.5
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 3.1e-35 152.5 111 69.4
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 4.1e-35 152.1 177 46.3
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 1.5e-34 150.2 181 49.7
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 1.5e-34 150.2 181 49.2
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 5.9e-34 148.3 180 50.6
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 7.7e-34 147.9 150 56.7
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.0e-33 147.5 190 48.4
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.0e-33 147.5 116 64.7
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 3.8e-33 145.6 190 47.4
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 5.0e-33 145.2 109 67.9
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.0e-33 145.2 186 44.6
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.1e-32 144.1 168 46.4
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 1.4e-32 143.7 106 64.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 1.6e-31 140.2 160 50.0
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.6e-31 140.2 102 68.6
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.6e-31 140.2 102 68.6
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 3.6e-31 139.0 108 63.9
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 4.7e-31 138.7 174 45.4
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 6.1e-31 138.3 106 65.1
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 6.7e-30 134.8 112 62.5
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 3.3e-29 132.5 112 60.7
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 7.4e-29 131.3 104 63.5
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.8e-27 126.7 110 57.3
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 5.3e-27 125.2 119 56.3
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 9.1e-27 124.4 179 44.7
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.2e-26 124.0 108 58.3
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.2e-26 124.0 186 40.9
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 4.5e-26 122.1 158 48.7
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 8.5e-25 117.9 160 45.6
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 7.2e-24 114.8 173 42.8
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 9.4e-24 114.4 128 50.0
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.4e-22 110.5 99 61.6
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 1.4e-22 110.5 110 53.6
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.4e-22 110.5 142 42.3
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.8e-22 110.2 82 63.4
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 2.3e-22 109.8 137 44.5
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 2.3e-22 109.8 140 42.9
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.5e-21 107.1 167 40.1
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 5.7e-21 105.1 102 52.0
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 5.9e-18 95.1 69 92.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.5e-08 63.9 69 49.3
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 1.2e-07 60.8 42 61.9
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 1.2e-07 60.8 42 61.9


User provided reference genes

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