Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.U4J8DX Arachis hypogaea HOM05D000216 ORTHO05D003518 3.3e-30 134.4 69 100.0
Aa31csc39G170 Aethionema arabicum HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
AL2G20950 Arabidopsis lyrata HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
ATCG00160 Arabidopsis thaliana HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BcaC05g28802 Brassica carinata HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BNapus_Darmor_BZH_scaffold_253p00050 Brassica napus HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BolSC29t60572H Brassica oleracea HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BolSC37t60769H Brassica oleracea HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BolSC45t60936H Brassica oleracea HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BolSC46t60986H Brassica oleracea HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BolSC49t61199H Brassica oleracea HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BraSC140t45589Z Brassica rapa HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BraSC25t45883Z Brassica rapa HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BraSC58t46404Z Brassica rapa HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
BraSC59t46514Z Brassica rapa HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
CARHR281910 Cardamine hirsuta HOM05D000216 ORTHO05D003518 2.3e-15 85.1 80 61.2
Lalb_Chr01g0008431 Lupinus albus HOM05D000216 ORTHO05D003518 3.9e-15 84.3 80 61.2
Lalb_Chr09g0335351 Lupinus albus HOM05D000216 ORTHO05D003518 3.9e-15 84.3 80 61.2
Potri.013G139670 Populus trichocarpa HOM05D000216 ORTHO05D003518 5.1e-15 84.0 78 61.5
Potri.019G028700 Populus trichocarpa HOM05D000216 ORTHO05D003518 5.1e-15 84.0 78 61.5
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 5.1e-15 84.0 78 61.5
Glyma.07G071200 Glycine max HOM05D000216 ORTHO05D003518 8.7e-15 83.2 80 61.2
arahy.Tifrunner.gnm1.ann1.RU7F0N Arachis hypogaea HOM05D000216 ORTHO05D003518 1.1e-14 82.8 80 60.0
RcHm_v2.0_CPg0502421 Rosa chinensis HOM05D000216 ORTHO05D003518 1.1e-14 82.8 80 60.0
Medtr4g051110 Medicago truncatula HOM05D000216 ORTHO05D003518 1.5e-14 82.4 78 60.3
unitig_91.g26495 Utricularia gibba HOM05D000216 ORTHO05D003518 1.5e-14 82.4 79 59.5
QL93p1261_0001 Quercus lobata HOM05D000216 ORTHO05D003518 1.9e-14 82.0 78 60.3
PGR111G0003 Punica granatum HOM05D000216 ORTHO05D003518 2.5e-14 81.6 78 59.0
CAN.G612.2 Capsicum annuum HOM05D000216 ORTHO05D003518 3.3e-14 81.3 78 59.0
LjContig00318g0019073 Lotus japonicus HOM05D000216 ORTHO05D003518 4.3e-14 80.9 78 59.0
Ah.10g027610 Amaranthus hybridus HOM05D000216 ORTHO05D003518 5.6e-14 80.5 78 59.0
Ah.10g027790 Amaranthus hybridus HOM05D000216 ORTHO05D003518 5.6e-14 80.5 78 59.0
PSO548G0007 Papaver somniferum HOM05D000216 ORTHO05D003518 7.3e-14 80.1 78 59.0
HanXRQChr00c0313g0573451 Helianthus annuus HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
HanXRQChr00c0601g0576521 Helianthus annuus HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
HanXRQChr08g0210191 Helianthus annuus HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
HanXRQChr11g0326621 Helianthus annuus HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
HanXRQChr13g0415481 Helianthus annuus HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
HanXRQCPg0579811 Helianthus annuus HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
Lsat_1_v5_gn_0_46600 Lactuca sativa HOM05D000216 ORTHO05D003518 9.6e-14 79.7 78 59.0
Psat6g018440 Pisum sativum HOM05D000216 ORTHO05D003518 9.6e-14 79.7 80 58.8
Nn020s41500 Nelumbo nucifera HOM05D000216 ORTHO05D003518 1.3e-13 79.3 78 57.7
Nn025s41561 Nelumbo nucifera HOM05D000216 ORTHO05D003518 1.3e-13 79.3 78 57.7
AUR62030121 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.6e-13 79.0 78 56.4
LjContig00489g0007578 Lotus japonicus HOM05D000216 ORTHO05D003518 1.6e-13 79.0 78 57.7
arahy.Tifrunner.gnm1.ann1.D2ZWCD Arachis hypogaea HOM05D000216 ORTHO05D003518 2.1e-13 78.6 80 55.0
arahy.Tifrunner.gnm1.ann1.S81HDC Arachis hypogaea HOM05D000216 ORTHO05D003518 2.1e-13 78.6 80 55.0
CiPaw.12G030900 Carya illinoinensis HOM05D000216 ORTHO05D003518 2.1e-13 78.6 80 57.5
HanXRQChr14g0428001 Helianthus annuus HOM05D000216 ORTHO05D003518 2.1e-13 78.6 78 57.7
HanXRQChr14g0428021 Helianthus annuus HOM05D000216 ORTHO05D003518 2.1e-13 78.6 78 57.7
MSTRG.22048 Avicennia marina HOM05D000216 ORTHO05D003518 2.8e-13 78.2 78 57.7
AUR62030169 Chenopodium quinoa HOM05D000216 ORTHO05D003518 2.8e-13 78.2 78 56.4
Ah.05g176560 Amaranthus hybridus HOM05D000216 ORTHO05D003518 6.2e-13 77.0 78 56.4
AUR62021207 Chenopodium quinoa HOM05D000216 ORTHO05D003518 6.2e-13 77.0 78 56.4
DCAR_032473 Daucus carota HOM05D000216 ORTHO05D003518 6.2e-13 77.0 78 59.0
MELO3C000623.2 Cucumis melo HOM05D000216 ORTHO05D003518 8.1e-13 76.6 80 57.5
CsaV3_UNG207820 Cucumis sativus L. HOM05D000216 ORTHO05D003518 8.1e-13 76.6 80 58.8
Lsat_1_v5_gn_0_22681 Lactuca sativa HOM05D000216 ORTHO05D003518 8.1e-13 76.6 78 56.4
Psat0s2961g0040 Pisum sativum HOM05D000216 ORTHO05D003518 8.1e-13 76.6 78 56.4
Psat2g079840 Pisum sativum HOM05D000216 ORTHO05D003518 8.1e-13 76.6 78 56.4
Psat6g219440 Pisum sativum HOM05D000216 ORTHO05D003518 8.1e-13 76.6 78 56.4
Psat7g033640 Pisum sativum HOM05D000216 ORTHO05D003518 8.1e-13 76.6 78 56.4
Sed0001459 Sechium edule HOM05D000216 ORTHO05D003518 8.1e-13 76.6 80 58.8
Sed0001731 Sechium edule HOM05D000216 ORTHO05D003518 8.1e-13 76.6 80 58.8
Sed0025851 Sechium edule HOM05D000216 ORTHO05D003518 8.1e-13 76.6 80 58.8
Atru.chr1.950 Acer truncatum HOM05D000216 ORTHO05D003518 1.1e-12 76.3 75 57.3
Migut.D01338 Erythranthe guttata HOM05D000216 ORTHO05D003518 1.1e-12 76.3 78 57.7
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 1.4e-12 75.9 78 57.7
CSS0038652 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003518 2.4e-12 75.1 78 56.4
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 2.4e-12 75.1 78 55.1
Medtr7g116690 Medicago truncatula HOM05D000216 ORTHO05D003518 6.9e-12 73.6 78 53.8
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 1.5e-11 72.4 71 59.2
Zm00001eb226420 Zea mays HOM05D000216 ORTHO05D003518 1.5e-11 72.4 78 56.4
Solyc07g021280.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.6e-11 71.6 78 53.8
Gohir.A05G307932 Gossypium hirsutum HOM05D000216 ORTHO05D003518 4.5e-11 70.9 78 53.8
Psat0s1586g0160 Pisum sativum HOM05D000216 ORTHO05D003518 4.5e-11 70.9 75 53.3
HanXRQChr10g0282511 Helianthus annuus HOM05D000216 ORTHO05D003518 5.8e-11 70.5 66 59.1
Phvul.003G256732 Phaseolus vulgaris HOM05D000216 ORTHO05D003518 7.6e-11 70.1 80 55.0
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 1.7e-10 68.9 70 57.1
Migut.D01413 Erythranthe guttata HOM05D000216 ORTHO05D003518 2.2e-10 68.6 51 70.6
Psat2g120680 Pisum sativum HOM05D000216 ORTHO05D003518 2.2e-10 68.6 78 51.3
Migut.C00361 Erythranthe guttata HOM05D000216 ORTHO05D003518 8.4e-10 66.6 78 55.1
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 8.4e-10 66.6 49 69.4
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.4e-10 66.6 72 54.2
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.4e-10 66.6 72 54.2
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.1e-09 66.2 68 58.8
Nitab4.5_0000312g0230 Nicotiana tabacum HOM05D000216 ORTHO05D003518 1.1e-09 66.2 48 68.8
Atru.chr13.1804 Acer truncatum HOM05D000216 ORTHO05D003518 1.9e-09 65.5 74 52.7
Atru.chr13.1817 Acer truncatum HOM05D000216 ORTHO05D003518 1.9e-09 65.5 74 52.7
Eucgr.J01354 Eucalyptus grandis HOM05D000216 ORTHO05D003518 2.4e-09 65.1 75 53.3
Lsat_1_v5_gn_1_56581 Lactuca sativa HOM05D000216 ORTHO05D003518 3.2e-09 64.7 73 54.8
arahy.Tifrunner.gnm1.ann1.AE8NLV Arachis hypogaea HOM05D000216 ORTHO05D003518 4.2e-09 64.3 50 70.0
Gohir.D09G071550 Gossypium hirsutum HOM05D000216 ORTHO05D003518 5.4e-09 63.9 51 64.7
Gohir.D05G308250 Gossypium hirsutum HOM05D000216 ORTHO05D003518 7.1e-09 63.5 75 52.0
Hund29488 Selenicereus undatus HOM05D000216 ORTHO05D003518 9.3e-09 63.2 61 57.4
Gorai.006G086500 Gossypium raimondii HOM05D000216 ORTHO05D003518 1.6e-08 62.4 51 62.7
Lalb_Chr06g0173071 Lupinus albus HOM05D000216 ORTHO05D003518 1.6e-08 62.4 50 66.0
Pp3c7_4970 Physcomitrium patens HOM05D000216 ORTHO05D003518 1.6e-08 62.4 74 52.7
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 2.1e-08 62.0 70 54.3
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 7.9e-08 60.1 68 54.4
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-07 59.7 64 56.2
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 1.0e-07 59.7 64 56.2
MELO3C001352.2 Cucumis melo HOM05D000216 ORTHO05D003518 1.8e-07 58.9 64 54.7
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.0e-07 58.2 64 54.7
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.0e-07 58.2 64 54.7
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.0e-07 58.2 64 54.7
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.0e-07 58.2 64 54.7
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.0e-07 58.2 64 54.7
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 3.9e-07 57.8 64 54.7
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 5.1e-07 57.4 64 54.7
Medtr7g012800 Medicago truncatula HOM05D000963 ORTHO05D004715 1.1e-06 56.2 38 76.3
Solyc12g062630.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.1e-06 56.2 70 48.6
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.1e-06 56.2 43 67.4
Solyc01g017530.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.5e-06 55.1 70 50.0
Hund01857 Selenicereus undatus HOM05D000216 ORTHO05D003518 7.4e-06 53.5 69 46.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 9.6e-06 53.1 61 54.1


User provided reference genes

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