Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.7e-158 562.0 298 100.0
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.0e-116 422.9 289 82.0
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 3.4e-116 422.2 289 81.7
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.7e-115 419.9 289 81.7
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 2.3e-80 303.1 285 64.6
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 1.5e-79 300.4 286 65.4
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 2.4e-77 293.1 263 66.5
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 3.4e-76 289.3 271 64.9
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 8.5e-75 284.6 289 61.2
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 1.9e-74 283.5 274 64.6
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 4.2e-74 282.3 292 60.6
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 1.7e-70 270.4 271 62.4
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 3.7e-70 269.2 275 64.0
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 2.6e-68 263.1 287 59.9
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 1.0e-67 261.2 255 63.5
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 3.8e-67 259.2 248 63.3
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 6.7e-64 248.4 254 57.9
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 4.1e-61 239.2 259 55.2
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 3.5e-60 236.1 260 55.0
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 1.7e-59 233.8 260 54.6
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 5.0e-59 232.3 273 54.9
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 2.5e-58 229.9 267 55.1
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 3.6e-57 226.1 186 69.9
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 8.0e-57 224.9 274 53.6
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 1.4e-56 224.2 264 55.3
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 4.0e-56 222.6 256 53.9
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 8.8e-56 221.5 263 54.0
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 1.5e-55 220.7 268 53.4
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 3.3e-55 219.5 270 53.7
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 7.5e-55 218.4 242 55.8
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 1.7e-54 217.2 261 52.9
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 3.7e-54 216.1 264 51.9
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 3.7e-54 216.1 268 54.9
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 4.8e-54 215.7 265 52.5
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 6.3e-54 215.3 271 52.8
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 4.1e-53 212.6 273 52.4
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 1.6e-52 210.7 252 53.6
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 5.9e-52 208.8 273 52.0
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 1.0e-51 208.0 247 55.1
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 1.3e-51 207.6 306 45.1
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 1.7e-51 207.2 184 65.8
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 2.2e-51 206.8 270 53.0
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 5.0e-51 205.7 183 62.8
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 8.5e-51 204.9 278 47.8
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 9.4e-50 201.4 262 49.6
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 1.2e-49 201.1 297 46.1
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 1.2e-49 201.1 267 49.8
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 1.6e-49 200.7 264 51.9
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 2.1e-49 200.3 285 49.1
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 6.1e-49 198.7 179 62.6
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 8.0e-49 198.4 179 62.0
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 2.3e-48 196.8 179 62.6
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 3.0e-48 196.4 234 51.3
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 4.0e-48 196.1 261 50.2
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 5.2e-48 195.7 179 63.7
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 5.2e-48 195.7 150 66.7
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 2.0e-47 193.7 277 49.8
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 4.4e-47 192.6 262 50.4
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 7.5e-47 191.8 154 67.5
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 9.8e-47 191.4 277 49.5
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.7e-46 190.7 275 49.5
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.7e-46 190.7 275 49.5
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 2.8e-46 189.9 251 51.4
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 4.8e-46 189.1 246 50.4
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 6.3e-46 188.7 244 50.8
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 8.3e-46 188.3 245 51.4
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 1.1e-45 188.0 184 60.9
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.1e-45 188.0 179 58.7
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 2.4e-45 186.8 287 45.3
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 3.1e-45 186.4 176 58.5
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 5.4e-45 185.7 260 48.5
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 9.1e-45 184.9 240 51.2
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.2e-44 184.5 176 60.8
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 1.2e-44 184.5 264 48.9
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 2.7e-44 183.3 264 48.5
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 4.5e-44 182.6 261 48.3
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 7.7e-44 181.8 180 59.4
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.0e-43 181.4 151 62.9
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.0e-43 181.4 238 50.0
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 1.3e-43 181.0 184 60.9
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 1.3e-43 181.0 270 46.7
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.7e-43 180.6 252 50.4
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 3.8e-43 179.5 227 51.1
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 3.8e-43 179.5 261 47.9
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 6.5e-43 178.7 184 60.3
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 6.5e-43 178.7 183 60.1
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 8.5e-43 178.3 128 69.5
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 1.9e-42 177.2 183 59.0
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 2.5e-42 176.8 280 46.8
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 2.1e-41 173.7 265 46.8
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 4.7e-41 172.6 282 44.7
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 4.7e-41 172.6 292 44.2
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 4.7e-41 172.6 178 55.6
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 1.0e-40 171.4 284 45.1
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 1.0e-40 171.4 253 46.2
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 1.4e-40 171.0 242 49.6
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 1.8e-40 170.6 192 55.7
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 1.8e-40 170.6 192 55.7
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.8e-40 170.6 258 47.7
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 8.8e-40 168.3 265 45.7
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 1.5e-39 167.5 223 48.0
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 1.3e-38 164.5 194 54.1
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 1.4e-37 161.0 210 47.6
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 1.6e-36 157.5 157 59.9
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.9e-35 153.3 193 51.3
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 1.1e-34 151.4 307 39.7
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 9.8e-31 138.3 161 53.4
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 1.3e-30 137.9 273 42.1
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 1.3e-30 137.9 155 50.3
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 1.8e-29 134.0 151 50.3
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 4.6e-28 129.4 198 47.0
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 3.0e-27 126.7 169 46.2
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 1.1e-26 124.8 140 50.7
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 1.1e-26 124.8 186 46.8
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 5.6e-26 122.5 179 44.7
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 2.1e-25 120.6 192 42.2
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 1.0e-24 118.2 180 43.3
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 1.4e-24 117.9 201 44.3
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 3.4e-23 113.2 153 52.3
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 9.2e-21 105.1 137 45.3
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 3.0e-19 100.1 120 46.7
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 3.9e-19 99.8 195 38.5
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 1.2e-17 94.7 70 68.6
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.4e-16 91.3 157 43.3
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 1.7e-14 84.3 72 66.7
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 3.3e-10 70.1 63 60.3


User provided reference genes

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