Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.4e-240 835.9 415 100.0
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 2.8e-233 811.6 417 98.1
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 6.9e-192 674.1 415 81.2
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 3.4e-191 671.8 416 81.0
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.5e-188 661.8 418 80.9
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 6.1e-188 661.0 416 81.2
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.8e-184 649.4 416 80.0
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 8.2e-177 624.0 415 77.3
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.8e-176 622.9 415 77.6
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 9.1e-176 620.5 415 77.3
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.4e-173 613.2 426 74.4
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 3.6e-172 608.6 423 75.4
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.7e-172 608.2 426 74.6
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 3.0e-171 605.5 427 74.5
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 5.1e-171 604.7 417 76.3
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.5e-170 603.2 426 74.2
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 2.0e-170 602.8 425 73.4
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 3.3e-170 602.1 420 74.0
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 4.4e-170 601.7 420 74.0
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 4.4e-170 601.7 420 74.0
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 7.4e-170 600.9 423 73.5
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 7.4e-170 600.9 421 73.2
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.3e-168 594.7 450 70.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 9.1e-168 594.0 429 72.3
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 9.1e-168 594.0 417 72.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.6e-167 592.4 422 73.0
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.3e-166 590.1 421 73.4
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 2.9e-166 589.0 420 73.1
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.9e-166 589.0 427 71.2
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 6.5e-166 587.8 421 71.7
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 8.5e-166 587.4 420 72.6
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.1e-165 587.0 420 72.4
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 1.5e-165 586.6 420 72.6
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 4.2e-165 585.1 421 70.1
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 5.5e-165 584.7 425 70.8
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 5.5e-165 584.7 421 69.8
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.6e-164 583.2 426 71.1
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 2.7e-164 582.4 420 71.9
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 2.3e-163 579.3 418 71.5
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 8.8e-163 577.4 424 71.9
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 2.6e-162 575.9 424 69.6
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 3.3e-162 575.5 414 70.0
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 9.7e-162 573.9 429 69.0
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.7e-161 573.2 420 70.2
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.1e-160 570.5 424 69.8
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.2e-159 567.0 413 70.9
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.6e-159 566.6 427 68.4
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.6e-159 566.6 418 70.6
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.2e-157 558.9 418 69.1
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.7e-156 555.1 415 68.0
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 6.1e-156 554.7 419 67.5
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.8e-155 553.1 427 66.3
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.0e-155 552.0 415 67.7
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 5.9e-151 538.1 425 66.4
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 2.9e-150 535.8 415 65.3
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 8.5e-150 534.3 422 66.6
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.1e-149 533.9 421 67.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 1.1e-149 533.9 422 66.1
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 1.9e-149 533.1 421 66.7
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 3.2e-149 532.3 421 66.0
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 4.2e-149 531.9 416 65.9
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 4.2e-149 531.9 435 64.8
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.2e-148 530.4 421 66.0
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 8.0e-148 527.7 424 65.8
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 4.0e-147 525.4 434 65.2
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 4.0e-147 525.4 434 65.2
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 4.0e-147 525.4 434 65.2
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.3e-145 520.4 422 65.9
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 2.2e-145 519.6 422 65.9
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 8.3e-145 517.7 418 66.5
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.1e-144 517.3 432 63.7
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.1e-144 517.3 415 63.1
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.1e-144 517.3 415 63.1
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 5.4e-144 515.0 415 62.9
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 2.7e-143 512.7 416 66.1
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 3.3e-141 505.8 416 63.7
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.3e-139 499.6 416 63.9
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.5e-138 496.9 415 63.1
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.7e-137 493.4 415 62.9
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 5.4e-136 488.4 419 62.3
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 5.4e-136 488.4 415 62.4
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 9.2e-136 487.6 411 63.3
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 4.6e-135 485.3 417 61.9
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 3.9e-134 482.3 405 63.7
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 8.0e-132 474.6 478 57.5
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 3.1e-131 472.6 409 62.3
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.2e-130 470.7 417 61.6
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 8.3e-129 464.5 427 59.5
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 8.3e-129 464.5 426 60.3
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 1.1e-128 464.2 426 60.3
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.9e-128 463.4 398 62.6
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 7.0e-128 461.5 427 59.5
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 6.6e-126 454.9 413 59.3
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 9.8e-122 441.0 255 83.5
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 2.3e-118 429.9 415 56.9
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 2.6e-114 416.4 257 81.7
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 6.4e-113 411.8 373 59.8
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.4e-112 410.6 256 77.7
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.8e-107 393.7 238 81.1
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 7.8e-103 378.3 464 46.8
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 9.9e-98 361.3 274 70.4
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.2e-96 356.3 247 74.5
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 5.4e-96 355.5 422 49.3
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 6.2e-92 342.0 423 48.2
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 4.5e-90 335.9 466 42.3
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 3.8e-81 306.2 466 41.8
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.8e-75 287.3 253 60.5
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.5e-74 284.3 182 77.5
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 2.3e-70 270.4 440 37.5
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 2.6e-45 187.2 163 52.8
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 6.3e-36 156.0 197 47.7
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 8.3e-36 155.6 492 26.2
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 2.0e-34 151.0 505 26.1
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 1.5e-32 144.8 467 27.6
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.2e-31 141.7 185 44.9
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 5.0e-25 119.8 107 53.3
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 3.6e-23 113.6 70 81.4
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 8.0e-23 112.5 98 62.2
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 5.4e-19 99.8 128 44.5
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 2.3e-09 67.8 106 37.7
VMungo0251G0458 Vigna mungo HOM05D006687 ORTHO05D008379 5.6e-08 63.2 87 46.0


User provided reference genes

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