Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.8e-174 614.4 304 100.0
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 9.9e-172 606.7 304 98.4
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 6.3e-150 534.3 300 85.0
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.5e-148 529.6 295 84.7
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 5.9e-148 527.7 292 85.3
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 5.0e-147 524.6 295 84.4
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 4.2e-146 521.5 293 84.3
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.4e-144 516.5 292 83.9
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.0e-143 512.7 296 83.1
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.1e-141 506.9 292 81.5
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 5.5e-138 494.6 303 74.9
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 7.2e-138 494.2 304 74.3
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.2e-137 493.4 304 74.3
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.8e-136 489.6 304 73.4
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.3e-136 489.2 304 73.4
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 2.3e-136 489.2 303 75.2
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 3.0e-136 488.8 303 74.6
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.5e-135 486.5 303 74.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.5e-135 486.5 304 74.3
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.0e-135 486.1 303 73.6
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.3e-134 483.4 303 72.3
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.8e-134 482.3 304 72.0
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 3.7e-134 481.9 295 74.6
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.8e-134 481.5 303 73.9
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 6.3e-134 481.1 304 72.4
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.4e-133 479.9 303 72.3
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 1.8e-133 479.6 302 73.2
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.8e-133 479.6 307 72.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.8e-133 479.6 307 72.0
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.8e-133 479.6 296 75.7
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 4.1e-133 478.4 302 72.8
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 5.3e-133 478.0 302 72.5
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.3e-133 478.0 307 71.7
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 5.3e-133 478.0 295 73.6
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 5.3e-133 478.0 307 71.7
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 7.0e-133 477.6 304 71.7
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.2e-132 476.9 307 71.3
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.2e-132 476.9 303 71.9
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.0e-132 476.1 325 69.2
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 2.6e-132 475.7 303 71.6
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.6e-132 475.7 307 71.3
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.5e-132 475.3 303 71.6
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 4.5e-132 474.9 303 71.6
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.5e-132 474.9 295 73.2
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 7.7e-132 474.2 304 72.4
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.0e-131 473.8 294 72.1
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.0e-131 473.8 321 69.8
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.0e-131 473.8 304 73.0
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.0e-131 473.8 303 72.6
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 3.8e-131 471.9 303 72.3
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 6.5e-131 471.1 304 73.4
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 6.5e-131 471.1 295 72.5
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.1e-130 470.3 304 72.4
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.5e-130 469.9 296 73.3
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.9e-130 469.5 303 71.0
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.9e-130 469.5 298 71.8
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.5e-130 469.2 303 71.9
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 9.4e-130 467.2 303 70.6
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 2.1e-129 466.1 298 70.8
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 8.0e-129 464.2 295 71.9
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.3e-128 462.6 288 72.6
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.1e-127 460.3 301 69.1
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.3e-126 456.8 351 63.2
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 3.7e-126 455.3 322 67.1
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 8.2e-126 454.1 295 70.5
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 8.2e-126 454.1 273 76.9
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 4.1e-125 451.8 299 70.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 9.1e-125 450.7 295 70.5
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.6e-124 449.1 297 69.7
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.5e-124 448.7 296 70.6
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 5.9e-124 448.0 295 70.5
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 5.9e-124 448.0 313 66.5
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 7.7e-124 447.6 296 70.3
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 7.7e-124 447.6 296 70.3
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.0e-123 447.2 296 70.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 1.3e-123 446.8 296 70.3
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 6.5e-123 444.5 295 70.5
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.1e-122 443.7 295 68.5
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.1e-122 443.7 298 66.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.5e-122 443.4 293 68.9
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 7.2e-122 441.0 295 70.2
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.2e-121 440.3 298 67.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.2e-119 433.7 321 64.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.5e-119 433.3 329 65.0
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 7.5e-119 431.0 297 67.3
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 8.3e-118 427.6 290 67.9
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 3.1e-117 425.6 264 74.2
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 4.1e-117 425.2 290 69.3
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 7.0e-117 424.5 304 67.1
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 4.5e-116 421.8 266 71.4
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.7e-115 419.9 295 65.1
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.2e-111 407.1 304 64.1
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 4.1e-109 398.7 297 63.3
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.0e-96 357.5 220 73.2
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.3e-94 350.5 199 83.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 9.2e-93 344.4 303 54.8
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 9.5e-90 334.3 291 55.3
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.1e-88 330.9 206 73.8
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.1e-88 330.9 285 52.3
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.2e-88 328.6 286 55.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.9e-85 320.1 209 67.9
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 2.1e-73 280.0 184 72.3
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.3e-67 260.8 258 50.8
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 5.6e-66 255.4 166 70.5
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.6e-57 227.3 151 68.9
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.4e-55 219.5 151 66.9
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 1.5e-50 204.1 152 66.4
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.4e-47 193.0 141 66.0
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 3.2e-37 159.8 115 68.7
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.3e-35 154.5 106 70.8
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.6e-31 140.2 73 87.7
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.8e-27 127.5 334 26.9
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 5.1e-27 125.9 80 71.2
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 8.8e-27 125.2 82 73.2
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 5.3e-24 115.9 118 50.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-22 110.9 72 68.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.1e-21 108.2 301 26.9
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 4.2e-21 106.3 321 28.7
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.8e-08 64.3 41 73.2


User provided reference genes

Program Settings