Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RX4XEC Arachis hypogaea HOM05D009346 ORTHO05D000090 4.1e-76 290.0 264 100.0
arahy.Tifrunner.gnm1.ann1.E94DPC Arachis hypogaea HOM05D009346 ORTHO05D000090 1.4e-47 195.3 254 58.7
arahy.Tifrunner.gnm1.ann1.3F914A Arachis hypogaea HOM05D009346 ORTHO05D000090 8.8e-47 192.6 261 83.5
arahy.Tifrunner.gnm1.ann1.90E6RV Arachis hypogaea HOM05D009346 ORTHO05D000090 1.2e-46 192.2 262 82.1
arahy.Tifrunner.gnm1.ann1.2R9LX6 Arachis hypogaea HOM05D009346 ORTHO05D000090 1.1e-44 185.7 260 82.3
arahy.Tifrunner.gnm1.ann1.ZLB7GT Arachis hypogaea HOM05D009346 ORTHO05D012019 1.3e-42 178.7 250 82.0
arahy.Tifrunner.gnm1.ann1.6N3FKC Arachis hypogaea HOM05D009346 ORTHO05D000090 1.2e-40 172.2 262 80.2
arahy.Tifrunner.gnm1.ann1.M0LQP7 Arachis hypogaea HOM05D009346 ORTHO05D000090 8.0e-40 169.5 261 80.1
arahy.Tifrunner.gnm1.ann1.FH5YY3 Arachis hypogaea HOM05D009346 ORTHO05D000090 5.2e-39 166.8 262 80.9
arahy.Tifrunner.gnm1.ann1.V0KD92 Arachis hypogaea HOM05D009346 ORTHO05D000090 7.8e-35 152.9 261 76.2
arahy.Tifrunner.gnm1.ann1.WFQ33V Arachis hypogaea HOM05D009346 ORTHO05D000090 4.3e-33 147.1 260 77.3
arahy.Tifrunner.gnm1.ann1.X50QN8 Arachis hypogaea HOM05D009346 ORTHO05D000090 7.3e-33 146.4 260 78.1
arahy.Tifrunner.gnm1.ann1.IS373J Arachis hypogaea HOM05D009346 ORTHO05D000090 4.7e-32 143.7 260 76.2
arahy.Tifrunner.gnm1.ann1.8MI9U1 Arachis hypogaea HOM05D009346 ORTHO05D000090 8.0e-32 142.9 260 71.2
arahy.Tifrunner.gnm1.ann1.VQE0ZZ Arachis hypogaea HOM05D009346 ORTHO05D000090 6.8e-31 139.8 262 73.7
arahy.Tifrunner.gnm1.ann1.H6KYDJ Arachis hypogaea HOM05D009346 ORTHO05D003288 1.2e-30 139.0 260 76.2
arahy.Tifrunner.gnm1.ann1.R9EUUB Arachis hypogaea HOM05D009346 ORTHO05D000090 5.4e-28 130.2 259 74.9
arahy.Tifrunner.gnm1.ann1.K7FXBU Arachis hypogaea HOM05D009346 ORTHO05D012019 1.1e-25 122.5 193 83.9
arahy.Tifrunner.gnm1.ann1.4J8AWY Arachis hypogaea HOM05D009346 ORTHO05D000090 3.3e-25 120.9 79 81.0
arahy.Tifrunner.gnm1.ann1.IF7MEJ Arachis hypogaea HOM05D009346 ORTHO05D000090 1.6e-19 102.1 245 72.2
arahy.Tifrunner.gnm1.ann1.3QXB2F Arachis hypogaea HOM05D009346 ORTHO05D003288 3.5e-19 100.9 84 67.9
Glyma.07G173300 Glycine max HOM05D000162 ORTHO05D000090 8.6e-18 96.3 259 57.9
arahy.Tifrunner.gnm1.ann1.W9XRJL Arachis hypogaea HOM05D009346 ORTHO05D003288 2.8e-16 91.3 111 51.4
Lalb_Chr03g0033341 Lupinus albus HOM05D009346 ORTHO05D023712 6.4e-13 80.1 91 50.5
arahy.Tifrunner.gnm1.ann1.GWFK49 Arachis hypogaea HOM05D009346 ORTHO05D003288 1.1e-12 79.3 101 49.5
Glyma.01G059900 Glycine max HOM05D019677 ORTHO05D000090 1.2e-11 75.9 110 42.7
Glyma.02G086700 Glycine max HOM05D019677 ORTHO05D000090 1.6e-11 75.5 257 58.4
Lalb_Chr18g0049131 Lupinus albus HOM05D019677 ORTHO05D000090 6.0e-11 73.6 55 63.6
Lj2g0013660 Lotus japonicus HOM05D000162 ORTHO05D000090 1.0e-10 72.8 85 47.1
Psat5g156080 Pisum sativum HOM05D000162 ORTHO05D000090 1.3e-10 72.4 73 52.1
TPR.G27791 Trifolium pratense HOM05D000162 ORTHO05D000090 1.3e-10 72.4 66 50.0
Glyma.01G058700 Glycine max HOM05D019677 ORTHO05D000090 1.7e-10 72.0 89 42.7
Lalb_Chr13g0294781 Lupinus albus HOM05D000162 ORTHO05D000090 2.3e-10 71.6 102 41.2
TPR.G11943 Trifolium pratense HOM05D000162 ORTHO05D000090 2.3e-10 71.6 94 42.6
Lj2g0018902 Lotus japonicus HOM05D019677 ORTHO05D000090 5.1e-10 70.5 83 45.8
TPR.G18222 Trifolium pratense HOM05D000162 ORTHO05D000090 6.6e-10 70.1 71 52.1
Glyma.01G059000 Glycine max HOM05D019677 ORTHO05D000090 8.6e-10 69.7 59 54.2
Glyma.05G151600 Glycine max HOM05D000162 ORTHO05D000090 8.6e-10 69.7 73 47.9
arahy.Tifrunner.gnm1.ann1.27YA2T Arachis hypogaea HOM05D031827 ORTHO05D023712 1.9e-09 68.6 78 53.8
Glyma.08G108400 Glycine max HOM05D000162 ORTHO05D000090 1.9e-09 68.6 75 49.3
Medtr3g054110 Medicago truncatula HOM05D000162 ORTHO05D000090 2.5e-09 68.2 58 53.4
Lj4g0007849 Lotus japonicus HOM05D000162 ORTHO05D000090 9.5e-09 66.2 49 61.2
arahy.Tifrunner.gnm1.ann1.PFBW5V Arachis hypogaea HOM05D031827 ORTHO05D023712 2.8e-08 64.7 53 60.4
Ca_17997_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 4.7e-08 63.9 87 42.5
Cc00_g04080 Coffea canephora HOM05D009346 ORTHO05D020421 4.7e-08 63.9 50 58.0
Lalb_Chr01g0008691 Lupinus albus HOM05D031827 ORTHO05D023712 8.1e-08 63.2 45 66.7
Medtr8g083130 Medicago truncatula HOM05D000162 ORTHO05D000090 1.1e-07 62.8 49 59.2
Phvul.002G198150 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 1.8e-07 62.0 50 54.0
Psat7g075280 Pisum sativum HOM05D000162 ORTHO05D000090 1.8e-07 62.0 67 49.3
Solyc06g007300.2 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.8e-07 62.0 50 56.0
Solyc06g007740.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.8e-07 62.0 50 56.0
Glyma.16G206551 Glycine max HOM05D000162 ORTHO05D000090 2.4e-07 61.6 111 36.0
Phvul.002G204300 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 2.4e-07 61.6 92 39.1
RcHm_v2.0_Chr5g0078541 Rosa chinensis HOM05D009346 ORTHO05D012019 2.4e-07 61.6 57 49.1
Sopen06g002220 Solanum pennellii HOM05D000162 ORTHO05D000090 4.0e-07 60.8 50 52.0
QL03p013174 Quercus lobata HOM05D000162 ORTHO05D000090 5.2e-07 60.5 200 54.0
AUR62000309 Chenopodium quinoa HOM05D006174 ORTHO05D007987 6.8e-07 60.1 49 53.1
Sopen06g002700 Solanum pennellii HOM05D000162 ORTHO05D000090 1.5e-06 58.9 55 50.9
PGSC0003DMG400020555 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.0e-06 58.5 50 52.0
VMungo0251G3087 Vigna mungo HOM05D000162 ORTHO05D000090 2.0e-06 58.5 50 50.0
QL03p013240 Quercus lobata HOM05D000162 ORTHO05D000090 2.6e-06 58.2 50 54.0
QL05p059431 Quercus lobata HOM05D000162 ORTHO05D000090 2.6e-06 58.2 62 50.0
arahy.Tifrunner.gnm1.ann1.K4KTGW Arachis hypogaea HOM05D000162 ORTHO05D000090 3.4e-06 57.8 49 53.1
Glyma.09G156000 Glycine max HOM05D000162 ORTHO05D000090 3.4e-06 57.8 102 37.3
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.4e-06 57.8 50 50.0
QL03p017801 Quercus lobata HOM05D000162 ORTHO05D000090 3.4e-06 57.8 66 47.0
SalBow7G2569 Salvia bowleyana HOM05D000162 ORTHO05D000090 3.4e-06 57.8 49 51.0
Cc07_g18960 Coffea canephora HOM05D000162 ORTHO05D000090 4.4e-06 57.4 64 48.4
Gohir.A04G034650 Gossypium hirsutum HOM05D000162 ORTHO05D000090 4.4e-06 57.4 36 66.7
PGSC0003DMG400020643 Solanum tuberosum HOM05D000162 ORTHO05D000090 4.4e-06 57.4 51 51.0
arahy.Tifrunner.gnm1.ann1.78B0B6 Arachis hypogaea HOM05D000162 ORTHO05D000090 5.8e-06 57.0 50 52.0
CAN.G241.21 Capsicum annuum HOM05D000162 ORTHO05D000090 5.8e-06 57.0 46 54.3
Haze_27337 Corylus avellana HOM05D019995 ORTHO05D012019 5.8e-06 57.0 37 70.3
Hma1.2p1_1076F.1_g254520 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.8e-06 57.0 84 34.5
Sopen06g002620 Solanum pennellii HOM05D000162 ORTHO05D000090 5.8e-06 57.0 42 59.5
PGSC0003DMG400020644 Solanum tuberosum HOM05D000162 ORTHO05D000090 5.8e-06 57.0 50 50.0
QL03p013269 Quercus lobata HOM05D000162 ORTHO05D000090 7.6e-06 56.6 50 52.0
QL04p042212 Quercus lobata HOM05D000162 ORTHO05D000090 7.6e-06 56.6 51 51.0
CSS0011102 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 9.9e-06 56.2 46 58.7
Lalb_Chr03g0042321 Lupinus albus HOM05D009346 ORTHO05D011797 9.9e-06 56.2 37 62.2
QL03p013262 Quercus lobata HOM05D000162 ORTHO05D000090 9.9e-06 56.2 63 47.6
Solyc05g009253.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 9.9e-06 56.2 55 49.1
PGSC0003DMG400022035 Solanum tuberosum HOM05D000162 ORTHO05D000090 9.9e-06 56.2 55 47.3


User provided reference genes

Program Settings