Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RWA00I Arachis hypogaea HOM05D002493 ORTHO05D003175 4.3e-92 341.3 169 100.0
arahy.Tifrunner.gnm1.ann1.TK2Q97 Arachis hypogaea HOM05D002493 ORTHO05D003175 1.0e-48 197.2 134 76.9
arahy.Tifrunner.gnm1.ann1.SF5CY1 Arachis hypogaea HOM05D002493 ORTHO05D003175 1.2e-46 190.3 135 75.6
arahy.Tifrunner.gnm1.ann1.CFFK31 Arachis hypogaea HOM05D002493 ORTHO05D003175 4.0e-29 132.1 134 56.7
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 1.5e-28 130.2 130 60.0
Haze_20255 Corylus avellana HOM05D002493 ORTHO05D003175 4.4e-28 128.6 130 60.8
CiPaw.09G049700 Carya illinoinensis HOM05D002493 ORTHO05D003175 5.8e-28 128.3 130 60.0
Dinv08254 Davidia involucrata HOM05D002493 ORTHO05D003175 7.5e-28 127.9 130 60.8
Cfa019980 Carpinus fangiana HOM05D002493 ORTHO05D003175 2.9e-27 125.9 130 60.0
Lalb_Chr14g0365651 Lupinus albus HOM05D002493 ORTHO05D003175 2.9e-27 125.9 135 57.0
COL.COLO4_08833 Corchorus olitorius HOM05D002493 ORTHO05D003175 3.7e-27 125.6 131 55.7
CANSAT64G2707 Cannabis sativa HOM05D002493 ORTHO05D003175 4.9e-27 125.2 130 58.5
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 1.4e-26 123.6 130 59.2
Sed0019660 Sechium edule HOM05D002493 ORTHO05D003175 1.4e-26 123.6 130 56.9
arahy.Tifrunner.gnm1.ann1.596WN8 Arachis hypogaea HOM05D002493 ORTHO05D003175 2.4e-26 122.9 106 62.3
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 1.2e-25 120.6 136 58.1
Phvul.007G239100 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 2.0e-25 119.8 130 56.2
CsaV3_3G039870 Cucumis sativus L. HOM05D002493 ORTHO05D003175 2.7e-25 119.4 132 59.8
Sed0023770 Sechium edule HOM05D002493 ORTHO05D003175 2.7e-25 119.4 130 56.9
Prupe.7G028700 Prunus persica HOM05D002493 ORTHO05D003175 3.5e-25 119.0 130 60.0
Thecc.05G121400 Theobroma cacao HOM05D002493 ORTHO05D003175 3.5e-25 119.0 130 55.4
Carub.0006s0407 Capsella rubella HOM05D002493 ORTHO05D003175 4.6e-25 118.6 133 52.6
ClCG10G016470 Citrullus lanatus HOM05D002493 ORTHO05D003175 4.6e-25 118.6 131 58.8
MELO3C009729.2 Cucumis melo HOM05D002493 ORTHO05D003175 4.6e-25 118.6 131 58.8
Gohir.A11G306400 Gossypium hirsutum HOM05D002493 ORTHO05D003175 4.6e-25 118.6 137 54.7
Potri.016G033300 Populus trichocarpa HOM05D002493 ORTHO05D003175 4.6e-25 118.6 140 53.6
THA.LOC104823166 Tarenaya hassleriana HOM05D002493 ORTHO05D003175 4.6e-25 118.6 152 46.7
Gohir.D11G321900 Gossypium hirsutum HOM05D002493 ORTHO05D003175 7.8e-25 117.9 130 55.4
Gorai.007G352000 Gossypium raimondii HOM05D002493 ORTHO05D003175 7.8e-25 117.9 130 55.4
Dinv21482 Davidia involucrata HOM05D002493 ORTHO05D003175 1.7e-24 116.7 131 55.0
Eucgr.A02206 Eucalyptus grandis HOM05D002493 ORTHO05D003175 2.3e-24 116.3 129 54.3
arahy.Tifrunner.gnm1.ann1.4137UB Arachis hypogaea HOM05D002493 ORTHO05D003175 3.0e-24 115.9 137 54.7
arahy.Tifrunner.gnm1.ann1.ZA3CQ0 Arachis hypogaea HOM05D002493 ORTHO05D003175 3.0e-24 115.9 137 54.7
AL6G14970 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 3.9e-24 115.5 132 52.3
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla HOM05D002493 ORTHO05D003175 8.6e-24 114.4 131 57.3
Lalb_Chr02g0156621 Lupinus albus HOM05D002493 ORTHO05D003175 8.6e-24 114.4 137 52.6
Sabra16G0036400 Salix brachista HOM05D002493 ORTHO05D003175 1.5e-23 113.6 141 52.5
Actinidia05482 Actinidia chinensis HOM05D002493 ORTHO05D003175 1.9e-23 113.2 131 54.2
Lalb_Chr22g0357761 Lupinus albus HOM05D002493 ORTHO05D003175 1.9e-23 113.2 138 52.9
VMungo0720G0912 Vigna mungo HOM05D002493 ORTHO05D003175 1.9e-23 113.2 130 53.8
Cpa.g.sc92.76 Carica papaya HOM05D002493 ORTHO05D003175 2.5e-23 112.8 131 55.0
Duzib106G0075 Durio zibethinus HOM05D002493 ORTHO05D003175 2.5e-23 112.8 130 53.1
Glyma.02G157800 Glycine max HOM05D002493 ORTHO05D003175 2.5e-23 112.8 130 55.4
THA.LOC104826877 Tarenaya hassleriana HOM05D002493 ORTHO05D003175 2.5e-23 112.8 135 50.4
Lj1g0014460 Lotus japonicus HOM05D002493 ORTHO05D003175 7.3e-23 111.3 135 53.3
Sp6g37700 Schrenkiella parvula HOM05D002493 ORTHO05D003175 7.3e-23 111.3 133 49.6
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 9.5e-23 110.9 136 56.6
Lalb_Chr24g0400441 Lupinus albus HOM05D002493 ORTHO05D003175 9.5e-23 110.9 142 54.2
Actinidia38179 Actinidia chinensis HOM05D002493 ORTHO05D003175 1.2e-22 110.5 130 53.8
CSS0002579 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 1.2e-22 110.5 130 53.1
Peaxi162Scf01487g00006 Petunia axillaris HOM05D002493 ORTHO05D003175 1.6e-22 110.2 136 52.2
Thhalv10013510m.g Eutrema salsugineum HOM05D002493 ORTHO05D003175 2.8e-22 109.4 133 49.6
Nn7g36909 Nelumbo nucifera HOM05D002493 ORTHO05D003175 2.8e-22 109.4 137 48.2
Potri.006G035500 Populus trichocarpa HOM05D002493 ORTHO05D003175 2.8e-22 109.4 148 49.3
TAR633G1508 Trochodendron aralioides HOM05D002493 ORTHO05D003175 3.6e-22 109.0 137 51.8
DCAR_013651 Daucus carota HOM05D002493 ORTHO05D003175 4.7e-22 108.6 138 47.8
Duzib128G0587 Durio zibethinus HOM05D002493 ORTHO05D003175 4.7e-22 108.6 129 51.2
Glyma.19G127800 Glycine max HOM05D002493 ORTHO05D003175 4.7e-22 108.6 138 54.3
AT5G05140 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 6.2e-22 108.2 130 52.3
Ca_08373_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 6.2e-22 108.2 135 51.1
Rhsim04G0114000 Rhododendron simsii HOM05D002493 ORTHO05D003175 6.2e-22 108.2 130 55.4
Atru.chr1.1386 Acer truncatum HOM05D002493 ORTHO05D003175 8.0e-22 107.8 137 50.4
Nitab4.5_0000062g0160 Nicotiana tabacum HOM05D002493 ORTHO05D003175 1.4e-21 107.1 130 49.2
MSTRG.6331 Avicennia marina HOM05D002493 ORTHO05D003175 1.8e-21 106.7 134 50.7
CARHR208120 Cardamine hirsuta HOM05D002493 ORTHO05D003175 1.8e-21 106.7 130 53.1
TAR623G0194 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.3e-21 106.3 130 50.8
RcHm_v2.0_Chr2g0150411 Rosa chinensis HOM05D002493 ORTHO05D003175 8.9e-21 104.4 131 51.9
Nitab4.5_0007477g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 1.2e-20 104.0 130 48.5
Sabra06G0023800 Salix brachista HOM05D002493 ORTHO05D003175 1.5e-20 103.6 144 49.3
Ciclev10011717m.g Citrus clementina HOM05D002493 ORTHO05D003175 2.0e-20 103.2 136 51.5
Sopen10g031440 Solanum pennellii HOM05D002493 ORTHO05D003175 2.0e-20 103.2 131 49.6
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 2.6e-20 102.8 147 46.3
TWI74G0428 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 2.6e-20 102.8 134 51.5
vmacro08996 Vaccinium macrocarpon HOM05D002493 ORTHO05D003175 2.6e-20 102.8 132 53.0
Oeu024613.1 Olea europaea HOM05D002493 ORTHO05D003175 3.4e-20 102.4 136 48.5
Solyc10g080930.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 4.4e-20 102.1 131 49.6
TAR375G0992 Trochodendron aralioides HOM05D002493 ORTHO05D003175 4.4e-20 102.1 137 48.9
Atru.chr3.2727 Acer truncatum HOM05D002493 ORTHO05D003175 5.8e-20 101.7 131 50.4
Phvul.001G120200 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 7.5e-20 101.3 135 52.6
C09p71560 Brassica napus HOM05D002493 ORTHO05D003175 9.8e-20 100.9 131 48.9
BolC9t59917H Brassica oleracea HOM05D002493 ORTHO05D003175 9.8e-20 100.9 131 48.9
Sc13g0000980 Simmondsia chinensis HOM05D002493 ORTHO05D003175 9.8e-20 100.9 130 47.7
Manes.09G002800 Manihot esculenta HOM05D002493 ORTHO05D003175 1.3e-19 100.5 136 50.0
PSO384G4835 Papaver somniferum HOM05D002493 ORTHO05D003175 1.3e-19 100.5 137 48.9
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 2.2e-19 99.8 131 48.9
EL10Ac3g07266 Beta vulgaris HOM05D002493 ORTHO05D003175 3.7e-19 99.0 148 44.6
MBI19_g07500_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 3.7e-19 99.0 130 44.6
Nn2g14656 Nelumbo nucifera HOM05D002493 ORTHO05D003175 3.7e-19 99.0 131 44.3
TWI77G0717 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 3.7e-19 99.0 134 50.0
Ca_22467_v3 Cicer arietinum L. HOM05D000349 ORTHO05D003175 6.4e-19 98.2 129 48.1
Nitab4.5_0002869g0070 Nicotiana tabacum HOM05D002493 ORTHO05D003175 8.3e-19 97.8 148 45.3
PGR042G0425 Punica granatum HOM05D002493 ORTHO05D003175 8.3e-19 97.8 139 52.5
Aa31LG11G5990 Aethionema arabicum HOM05D002493 ORTHO05D003175 1.1e-18 97.4 140 46.4
FvH4_6g37520 Fragaria vesca HOM05D002493 ORTHO05D003175 1.1e-18 97.4 137 48.9
FAN14G2978 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.1e-18 97.4 137 48.9
PSO339G5287 Papaver somniferum HOM05D002493 ORTHO05D003175 2.4e-18 96.3 137 47.4
ATR0307G132 Amborella trichopoda HOM05D002493 ORTHO05D003175 4.1e-18 95.5 130 46.2
MSTRG.19785 Avicennia marina HOM05D002493 ORTHO05D003175 4.1e-18 95.5 138 45.7
Medtr7g089140 Medicago truncatula HOM05D002493 ORTHO05D003175 4.1e-18 95.5 135 47.4
TAR636G0768 Trochodendron aralioides HOM05D002493 ORTHO05D003175 4.1e-18 95.5 137 48.2
unitig_21.g20685 Utricularia gibba HOM05D002493 ORTHO05D003175 4.1e-18 95.5 152 45.4
Migut.J01632 Erythranthe guttata HOM05D002493 ORTHO05D003175 5.4e-18 95.1 144 45.8
MBI13_g36916_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 7.0e-18 94.7 137 46.0
VMungo1383G2045 Vigna mungo HOM05D002493 ORTHO05D003175 7.0e-18 94.7 135 47.4
AUR62030285 Chenopodium quinoa HOM05D002493 ORTHO05D003175 9.2e-18 94.4 134 43.3
Oeu027954.1 Olea europaea HOM05D002493 ORTHO05D003175 1.6e-17 93.6 138 46.4
TWI53G1609 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 2.1e-17 93.2 135 48.1
HanXRQChr13g0406701 Helianthus annuus HOM05D002493 ORTHO05D003175 2.7e-17 92.8 143 46.2
FAN09G4564 Fragaria x ananassa HOM05D002493 ORTHO05D003175 6.0e-17 91.7 149 43.6
BcaB05g21730 Brassica carinata HOM05D002493 ORTHO05D003175 7.8e-17 91.3 130 46.9
A10p31030 Brassica napus HOM05D002493 ORTHO05D003175 7.8e-17 91.3 133 45.9
BraA10t45148Z Brassica rapa HOM05D002493 ORTHO05D003175 7.8e-17 91.3 133 45.9
Oeu005221.1 Olea europaea HOM05D002493 ORTHO05D003175 7.8e-17 91.3 135 43.7
SalBow6G2849 Salvia bowleyana HOM05D002493 ORTHO05D003175 7.8e-17 91.3 144 49.3
Cc00_g10950 Coffea canephora HOM05D002493 ORTHO05D003175 1.0e-16 90.9 142 44.4
SGA_v2.0_scaffold69G23165 Striga asiatica HOM05D002493 ORTHO05D003175 1.3e-16 90.5 142 45.8
Ah.13g077170 Amaranthus hybridus HOM05D002493 ORTHO05D003175 1.7e-16 90.1 145 44.1
HPP92_025127 Vanilla planifolia HOM05D000001 ORTHO05D000003 1.7e-16 90.1 137 40.9
Nitab4.5_0000812g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 3.0e-16 89.4 130 46.2
FAN02G2197 Fragaria x ananassa HOM05D002493 ORTHO05D003175 3.9e-16 89.0 137 46.7
Ah.04g150770 Amaranthus hybridus HOM05D002493 ORTHO05D003175 6.6e-16 88.2 140 44.3
BcaC06g32223 Brassica carinata HOM05D002493 ORTHO05D003175 1.1e-15 87.4 135 44.4
Hund19081 Selenicereus undatus HOM05D002493 ORTHO05D003175 1.5e-15 87.0 136 44.1
BcaB01g05724 Brassica carinata HOM05D002493 ORTHO05D003175 1.9e-15 86.7 133 42.9
Migut.K00147 Erythranthe guttata HOM05D002493 ORTHO05D003175 3.3e-15 85.9 137 45.3
SGA_v2.0_scaffold66G22278 Striga asiatica HOM05D002493 ORTHO05D003175 4.3e-15 85.5 144 42.4
DCAR_009127 Daucus carota HOM05D002493 ORTHO05D003175 1.2e-14 84.0 150 40.7
Peaxi162Scf00003g05135 Petunia axillaris HOM05D002493 ORTHO05D003175 1.6e-14 83.6 130 39.2
Peaxi162Scf00003g05132 Petunia axillaris HOM05D002493 ORTHO05D003175 2.1e-14 83.2 130 41.5
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 3.6e-14 82.4 133 48.1
Ca_17097_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 6.2e-14 81.6 125 45.6
BcaB01g05937 Brassica carinata HOM05D002493 ORTHO05D003175 8.1e-14 81.3 133 43.6
BolC3t12803H Brassica oleracea HOM05D002493 ORTHO05D003175 8.1e-14 81.3 133 43.6
HanXRQChr01g0007661 Helianthus annuus HOM05D002493 ORTHO05D003175 8.1e-14 81.3 140 40.7
Peaxi162Scf00003g05036 Petunia axillaris HOM05D002493 ORTHO05D003175 1.1e-13 80.9 130 43.1
HPP92_006789 Vanilla planifolia HOM05D002493 ORTHO05D003175 1.4e-13 80.5 137 40.9
TPR.G16085 Trifolium pratense HOM05D002493 ORTHO05D003175 1.8e-13 80.1 138 41.3
BraA03t09582Z Brassica rapa HOM05D002493 ORTHO05D003175 2.3e-13 79.7 130 41.5
Psat3g080480 Pisum sativum HOM05D002493 ORTHO05D003175 3.1e-13 79.3 135 43.0
SGA_v2.0_scaffold106G30532 Striga asiatica HOM05D002493 ORTHO05D003175 3.1e-13 79.3 52 69.2
Carub.0003s1006 Capsella rubella HOM05D002493 ORTHO05D003175 5.2e-13 78.6 53 66.0
CARHR085400 Cardamine hirsuta HOM05D002493 ORTHO05D003175 8.9e-13 77.8 135 37.0
Sc19g0008100 Simmondsia chinensis HOM05D002493 ORTHO05D003175 8.9e-13 77.8 138 41.3
BcaC03g13147 Brassica carinata HOM05D002493 ORTHO05D003175 1.2e-12 77.4 131 40.5
C02p02180 Brassica napus HOM05D002493 ORTHO05D003175 1.2e-12 77.4 131 40.5
ECA248G1298 Erigeron canadensis HOM05D002493 ORTHO05D003175 1.5e-12 77.0 145 39.3
Sp3g09150 Schrenkiella parvula HOM05D002493 ORTHO05D003175 2.0e-12 76.6 116 46.6
AT3G10820 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 4.4e-12 75.5 134 39.6
Ca_12358_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 4.4e-12 75.5 112 46.4
unitig_0.g601 Utricularia gibba HOM05D000012 ORTHO05D001936 5.8e-12 75.1 149 40.9
A03p02180 Brassica napus HOM05D002493 ORTHO05D003175 7.5e-12 74.7 137 40.9
AL3G22340 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 6.4e-11 71.6 139 38.1
HanXRQChr10g0298511 Helianthus annuus HOM05D002493 ORTHO05D003175 2.4e-10 69.7 130 38.5
Lsat_1_v5_gn_7_61900 Lactuca sativa HOM05D002493 ORTHO05D003175 3.2e-10 69.3 164 36.6
Lsat_1_v5_gn_9_32260 Lactuca sativa HOM05D002493 ORTHO05D003175 3.2e-10 69.3 58 60.3
SalBow1G7393 Salvia bowleyana HOM05D002493 ORTHO05D003175 4.1e-10 68.9 140 38.6
arahy.Tifrunner.gnm1.ann1.XXDJ74 Arachis hypogaea HOM05D002493 ORTHO05D003175 7.1e-10 68.2 47 68.1
AUR62018377 Chenopodium quinoa HOM05D002493 ORTHO05D003175 9.2e-10 67.8 45 64.4
C03p02510 Brassica napus HOM05D002493 ORTHO05D003175 1.2e-09 67.4 55 60.0
Aqoxy2G00506 Aquilegia oxysepala HOM05D002493 ORTHO05D003175 1.6e-09 67.0 135 38.5
CAN.G128.85 Capsicum annuum HOM05D002493 ORTHO05D003175 1.6e-09 67.0 127 37.0
CDE08G0106 Ceratophyllum demersum HOM05D002493 ORTHO05D003175 1.6e-09 67.0 135 37.0
SEGI_11259 Sequoiadendron giganteum HOM05D002493 ORTHO05D003175 1.6e-09 67.0 127 38.6
Aqoxy1G00414 Aquilegia oxysepala HOM05D002493 ORTHO05D003175 2.1e-09 66.6 129 40.3
BolC2t06187H Brassica oleracea HOM05D002493 ORTHO05D003175 2.7e-09 66.2 143 37.1
CDE08G0887 Ceratophyllum demersum HOM05D002493 ORTHO05D003175 2.7e-09 66.2 135 37.8
ECA247G1003 Erigeron canadensis HOM05D002493 ORTHO05D003175 3.5e-09 65.9 56 55.4
SEGI_20583 Sequoiadendron giganteum HOM05D002493 ORTHO05D003175 3.5e-09 65.9 132 35.6
BraA02t04834Z Brassica rapa HOM05D002493 ORTHO05D003175 6.0e-09 65.1 144 33.3
unitig_744.g24176 Utricularia gibba HOM05D002493 ORTHO05D003175 1.7e-08 63.5 111 45.0
CAN.G960.68 Capsicum annuum HOM05D002493 ORTHO05D003175 2.3e-08 63.2 57 52.6
BcaC08g43026 Brassica carinata HOM05D002493 ORTHO05D003175 6.6e-08 61.6 85 40.0
C06p02790 Brassica napus HOM05D002493 ORTHO05D003175 6.6e-08 61.6 85 40.0
AL8G15170 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 8.6e-08 61.2 63 49.2
A05p38410 Brassica napus HOM05D002493 ORTHO05D003175 9.5e-07 57.8 45 60.0
AL6G22430 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 1.2e-06 57.4 92 41.3
BcaB04g18612 Brassica carinata HOM05D002493 ORTHO05D003175 1.6e-06 57.0 105 37.1
BcaC05g29428 Brassica carinata HOM05D002493 ORTHO05D003175 2.8e-06 56.2 74 45.9
QL07p012326 Quercus lobata HOM05D002493 ORTHO05D003175 3.6e-06 55.8 129 34.9
SGA_v2.0_scaffold21G09496 Striga asiatica HOM05D003051 ORTHO05D026199 4.7e-06 55.5 41 58.5
SGA_v2.0_scaffold88G27313 Striga asiatica HOM05D003051 ORTHO05D026199 4.7e-06 55.5 41 58.5
BraA05t22632Z Brassica rapa HOM05D002493 ORTHO05D003175 8.1e-06 54.7 47 57.4


User provided reference genes

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