Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 2.0e-255 885.9 731 100.0
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 9.5e-253 877.1 731 99.6
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 7.1e-208 728.0 377 97.1
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 8.0e-135 485.3 728 75.3
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 8.9e-134 481.9 719 75.0
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 4.4e-133 479.6 715 75.8
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 7.0e-131 472.2 726 74.2
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 1.2e-127 461.5 715 74.8
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 7.5e-117 425.6 646 77.2
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 1.3e-116 424.9 721 71.6
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 3.7e-116 423.3 632 78.0
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 5.4e-115 419.5 723 71.6
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 1.2e-111 408.3 638 77.6
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 1.6e-111 407.9 713 70.1
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 2.8e-111 407.1 727 67.3
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 1.8e-110 404.4 683 72.2
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 3.1e-110 403.7 711 70.0
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 4.4e-109 399.8 627 77.8
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 2.2e-108 397.5 716 70.7
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 6.4e-108 396.0 727 69.7
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 7.1e-107 392.5 708 70.9
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 7.1e-107 392.5 719 70.2
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 7.1e-107 392.5 727 70.3
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 1.2e-106 391.7 709 70.4
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 1.2e-106 391.7 694 71.9
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.2e-106 391.7 678 72.6
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 1.6e-106 391.3 720 70.6
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 1.6e-106 391.3 725 70.1
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 6.0e-106 389.4 694 71.3
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 2.3e-105 387.5 629 76.3
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 2.3e-105 387.5 631 76.5
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 3.9e-105 386.7 632 72.0
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 3.9e-105 386.7 631 76.7
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 3.9e-105 386.7 691 72.2
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 8.6e-105 385.6 723 70.3
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 2.5e-104 384.0 694 69.0
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 7.3e-104 382.5 670 72.7
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 9.6e-104 382.1 679 73.0
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 5.2e-102 376.3 554 82.9
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 1.5e-101 374.8 718 69.4
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 2.6e-101 374.0 628 65.4
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 9.9e-101 372.1 712 66.6
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 1.3e-100 371.7 352 58.5
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 2.4e-99 367.5 708 69.4
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 1.6e-98 364.8 635 74.8
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 2.1e-98 364.4 642 74.6
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 2.7e-98 364.0 719 68.8
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 3.9e-97 360.1 320 59.4
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 3.9e-97 360.1 704 68.3
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 3.3e-96 357.1 708 69.9
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 9.6e-96 355.5 688 68.3
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 6.2e-95 352.8 712 68.7
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 1.4e-94 351.7 711 68.6
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 6.9e-94 349.4 722 67.2
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 6.9e-94 349.4 727 67.3
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 2.0e-93 347.8 727 67.1
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 4.5e-93 346.7 625 72.2
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 1.4e-91 341.7 405 74.8
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 1.4e-91 341.7 705 68.7
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 3.5e-90 337.0 694 69.3
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 1.3e-89 335.1 709 64.6
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 1.3e-89 335.1 700 67.4
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 7.4e-88 329.3 644 71.1
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 7.4e-88 329.3 724 65.9
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 7.4e-88 329.3 675 64.7
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 1.4e-86 325.1 695 67.8
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 5.3e-86 323.2 448 67.4
AL8G24320 Arabidopsis lyrata HOM05D007098 ORTHO05D008793 1.5e-85 321.6 705 66.0
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 5.8e-85 319.7 707 66.2
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 1.4e-83 315.1 338 51.8
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 2.4e-83 314.3 630 70.2
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 1.2e-82 312.0 337 51.6
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 2.7e-82 310.8 712 63.8
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 2.7e-82 310.8 701 67.5
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 6.0e-82 309.7 694 64.6
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 7.9e-82 309.3 584 73.8
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 1.3e-81 308.5 590 73.7
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 5.1e-81 306.6 702 66.1
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 1.1e-80 305.4 517 51.5
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 9.6e-80 302.4 675 66.8
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 1.3e-79 302.0 440 58.0
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 4.8e-79 300.1 503 83.3
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 1.8e-78 298.1 629 64.7
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 1.8e-78 298.1 699 60.9
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 1.8e-78 298.1 680 65.9
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 6.9e-78 296.2 717 65.6
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 1.2e-77 295.4 703 60.9
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 1.2e-77 295.4 700 66.6
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 7.6e-77 292.7 704 61.1
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 1.7e-76 291.6 708 60.2
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 1.7e-76 291.6 704 65.8
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 1.1e-75 288.9 373 48.5
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 1.4e-75 288.5 699 60.5
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 3.2e-75 287.3 280 55.0
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 7.9e-74 282.7 731 63.5
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 5.0e-68 263.5 201 62.2
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 2.5e-67 261.2 509 81.5
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 3.6e-50 204.1 341 60.4
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 1.8e-49 201.8 486 78.6
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 1.1e-48 199.1 504 74.0
Os05g0294600 Oryza sativa ssp. japonica HOM05D007098 ORTHO05D008793 2.2e-47 194.9 541 66.5
Ca_26530_v3 Cicer arietinum L. HOM05D005706 ORTHO05D008793 6.5e-44 183.3 237 89.9
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 2.7e-34 151.4 185 48.6
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 7.5e-32 143.3 121 59.5
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 2.1e-26 125.2 304 28.6
DCAR_021600 Daucus carota HOM05D007098 ORTHO05D008793 5.4e-22 110.5 76 71.1
Duzib084G0201 Durio zibethinus HOM05D007098 ORTHO05D008793 5.4e-22 110.5 77 70.1
Lj5C101T15 Lonicera japonica HOM05D007098 ORTHO05D008793 2.0e-21 108.6 73 76.7
arahy.Tifrunner.gnm1.ann1.0Z4KK5 Arachis hypogaea HOM05D007098 ORTHO05D008793 4.5e-21 107.5 56 96.4
MBI11_g46065_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 2.9e-20 104.8 83 65.1
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 1.1e-19 102.8 172 33.1
Zm00001eb154110 Zea mays HOM05D007098 ORTHO05D008793 1.4e-17 95.9 74 63.5
Hma1.2p1_0014F.1_g009960 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 1.8e-14 85.5 65 66.2
ClCG03G003360 Citrullus lanatus HOM05D007098 ORTHO05D008793 2.2e-07 62.0 59 55.9
CDE07G1469 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 2.9e-07 61.6 145 23.4
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 2.9e-07 61.6 140 28.6
AUR62019299 Chenopodium quinoa HOM05D000001 ORTHO05D000003 1.9e-06 58.9 99 25.3
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 3.2e-06 58.2 110 26.4
Hma1.2p1_1303F.1_g274420 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 4.1e-06 57.8 146 26.0
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 5.4e-06 57.4 145 24.8
Cc02_g19560 Coffea canephora HOM05D003056 ORTHO05D003422 9.2e-06 56.6 143 26.6


User provided reference genes

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