Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RG7NZB Arachis hypogaea HOM05D000651 ORTHO05D003990 6.0e-239 830.5 430 100.0
arahy.Tifrunner.gnm1.ann1.34Z3BG Arachis hypogaea HOM05D000651 ORTHO05D003990 8.9e-134 481.1 325 80.9
arahy.Tifrunner.gnm1.ann1.7T6UUP Arachis hypogaea HOM05D000651 ORTHO05D003435 2.0e-133 479.9 325 80.3
arahy.Tifrunner.gnm1.ann1.DY9A0E Arachis hypogaea HOM05D000651 ORTHO05D003990 8.3e-132 474.6 325 79.1
arahy.Tifrunner.gnm1.ann1.58UXC0 Arachis hypogaea HOM05D000651 ORTHO05D003990 3.7e-124 449.1 325 76.9
arahy.Tifrunner.gnm1.ann1.DCIQ1B Arachis hypogaea HOM05D000651 ORTHO05D003990 5.2e-49 199.5 181 66.3
arahy.Tifrunner.gnm1.ann1.1CZ7RW Arachis hypogaea HOM05D000651 ORTHO05D003990 2.4e-38 164.1 127 68.5
arahy.Tifrunner.gnm1.ann1.9L0M57 Arachis hypogaea HOM05D000651 ORTHO05D003990 7.0e-38 162.5 113 79.6
arahy.Tifrunner.gnm1.ann1.F0QMSU Arachis hypogaea HOM05D000651 ORTHO05D003990 3.8e-36 156.8 95 85.3
arahy.Tifrunner.gnm1.ann1.ZQQT14 Arachis hypogaea HOM05D000651 ORTHO05D003990 2.1e-34 151.0 80 93.8
arahy.Tifrunner.gnm1.ann1.UQR3KX Arachis hypogaea HOM05D000651 ORTHO05D003990 8.0e-34 149.1 92 79.3
arahy.Tifrunner.gnm1.ann1.UZQ5G1 Arachis hypogaea HOM05D000651 ORTHO05D003990 1.1e-30 138.7 121 66.9
arahy.Tifrunner.gnm1.ann1.FQ9DWZ Arachis hypogaea HOM05D000651 ORTHO05D003990 7.5e-24 115.9 108 63.9
Glyma.09G108100 Glycine max HOM05D000651 ORTHO05D003990 7.8e-21 105.9 111 52.3
Lj4g0023305 Lotus japonicus HOM05D000651 ORTHO05D003990 2.3e-20 104.4 149 45.0
Medtr4g084700 Medicago truncatula HOM05D000651 ORTHO05D003990 4.3e-19 100.1 329 32.5
TPR.G38350 Trifolium pratense HOM05D000651 ORTHO05D003990 7.3e-19 99.4 206 37.4
Psat7g128680 Pisum sativum HOM05D000651 ORTHO05D003990 2.1e-18 97.8 344 32.0
Ca_18736_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 1.2e-16 92.0 177 40.1
Manes.17G077700 Manihot esculenta HOM05D000651 ORTHO05D003990 1.5e-16 91.7 265 29.1
TPR.G29102 Trifolium pratense HOM05D000651 ORTHO05D003990 2.0e-16 91.3 76 63.2
Ca_08976_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 2.6e-16 90.9 71 59.2
Ca_26223_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 3.4e-16 90.5 102 49.0
Lsat_1_v5_gn_3_55361 Lactuca sativa HOM05D000651 ORTHO05D003990 5.8e-16 89.7 117 45.3
Glyma.07G218500 Glycine max HOM05D000651 ORTHO05D003990 9.8e-16 89.0 333 32.7
VMungo0251G2258 Vigna mungo HOM05D000651 ORTHO05D003990 1.3e-15 88.6 240 33.3
CAN.G698.4 Capsicum annuum HOM05D000651 ORTHO05D003990 2.9e-15 87.4 128 41.4
Medtr1g048840 Medicago truncatula HOM05D000651 ORTHO05D003990 2.9e-15 87.4 106 47.2
Peaxi162Scf00047g00334 Petunia axillaris HOM05D000651 ORTHO05D003990 3.7e-15 87.0 127 38.6
Phvul.002G094900 Phaseolus vulgaris HOM05D000651 ORTHO05D003990 4.9e-15 86.7 93 48.4
Peaxi162Scf00253g01127 Petunia axillaris HOM05D000651 ORTHO05D003990 6.4e-15 86.3 90 44.4
Medtr4g019680 Medicago truncatula HOM05D000651 ORTHO05D003990 8.3e-15 85.9 87 50.6
Gohir.A04G141600 Gossypium hirsutum HOM05D000651 ORTHO05D003990 1.1e-14 85.5 86 50.0
Manes.17G077833 Manihot esculenta HOM05D000651 ORTHO05D003990 1.1e-14 85.5 280 26.8
MELO3C005307.2 Cucumis melo HOM05D021888 ORTHO05D003990 2.4e-14 84.3 206 35.0
PGSC0003DMG401006007 Solanum tuberosum HOM05D000651 ORTHO05D003990 3.2e-14 84.0 119 40.3
Thecc.02G282500 Theobroma cacao HOM05D000651 ORTHO05D003990 3.2e-14 84.0 128 40.6
Gohir.D04G187300 Gossypium hirsutum HOM05D000651 ORTHO05D003990 5.4e-14 83.2 86 47.7
Gorai.012G181100 Gossypium raimondii HOM05D000651 ORTHO05D003990 5.4e-14 83.2 86 47.7
Nitab4.5_0004230g0020 Nicotiana tabacum HOM05D000651 ORTHO05D003990 7.1e-14 82.8 109 45.0
Sc04g0005050 Simmondsia chinensis HOM05D000651 ORTHO05D003990 7.1e-14 82.8 141 40.4
TPR.G31286 Trifolium pratense HOM05D000651 ORTHO05D003990 9.2e-14 82.4 102 45.1
Sopen11g008650 Solanum pennellii HOM05D000651 ORTHO05D003990 1.2e-13 82.0 82 46.3
Solyc11g013590.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 1.6e-13 81.6 87 46.0
Solyc11g013630.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 1.6e-13 81.6 87 46.0
PGSC0003DMG402006007 Solanum tuberosum HOM05D000651 ORTHO05D003990 1.6e-13 81.6 119 40.3
Duzib248G1110 Durio zibethinus HOM05D000651 ORTHO05D003990 2.1e-13 81.3 162 38.3
Migut.E00431 Erythranthe guttata HOM05D000651 ORTHO05D003990 2.1e-13 81.3 104 38.5
HanXRQChr15g0476831 Helianthus annuus HOM05D000651 ORTHO05D003990 2.1e-13 81.3 96 44.8
Lalb_Chr05g0219531 Lupinus albus HOM05D000651 ORTHO05D003990 2.1e-13 81.3 218 32.6
Solyc11g013580.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 2.1e-13 81.3 77 49.4
ECA246G2591 Erigeron canadensis HOM05D000651 ORTHO05D003990 3.5e-13 80.5 127 43.3
Nitab4.5_0007504g0010 Nicotiana tabacum HOM05D000651 ORTHO05D003990 3.5e-13 80.5 107 43.9
FAN12G2732 Fragaria x ananassa HOM05D000651 ORTHO05D003990 4.6e-13 80.1 99 46.5
Rhsim09G0097300 Rhododendron simsii HOM05D000651 ORTHO05D003990 7.8e-13 79.3 137 38.7
Dinv07655 Davidia involucrata HOM05D000651 ORTHO05D003990 1.0e-12 79.0 147 38.1
Medtr7g106530 Medicago truncatula HOM05D000651 ORTHO05D003990 1.0e-12 79.0 97 45.4
RcHm_v2.0_Chr7g0206321 Rosa chinensis HOM05D015272 ORTHO05D022694 1.0e-12 79.0 137 40.9
Sopen11g008640 Solanum pennellii HOM05D000651 ORTHO05D003990 1.0e-12 79.0 171 34.5
Actinidia14976 Actinidia chinensis HOM05D000651 ORTHO05D003990 1.7e-12 78.2 165 37.6
ClCG01G006200 Citrullus lanatus HOM05D021888 ORTHO05D003990 1.7e-12 78.2 153 38.6
Sopen10g027660 Solanum pennellii HOM05D000002 ORTHO05D003990 1.7e-12 78.2 117 40.2
Sopen10g027670 Solanum pennellii HOM05D000651 ORTHO05D003990 1.7e-12 78.2 88 46.6
Sopen10g027700 Solanum pennellii HOM05D000651 ORTHO05D003990 1.7e-12 78.2 90 44.4
Haze_20167 Corylus avellana HOM05D015316 ORTHO05D003990 2.3e-12 77.8 73 53.4
THA.LOC104800215 Tarenaya hassleriana HOM05D008822 ORTHO05D003990 2.3e-12 77.8 96 44.8
AUR62038169 Chenopodium quinoa HOM05D008822 ORTHO05D003990 3.0e-12 77.4 99 44.4
Cc11_g08580 Coffea canephora HOM05D000651 ORTHO05D003990 3.9e-12 77.0 182 36.8
AUR62038081 Chenopodium quinoa HOM05D000294 ORTHO05D003990 5.1e-12 76.6 95 45.3
MD13G1024700 Malus domestica HOM05D000651 ORTHO05D003990 5.1e-12 76.6 116 43.1
Nitab4.5_0000926g0060 Nicotiana tabacum HOM05D000651 ORTHO05D003990 5.1e-12 76.6 107 43.0
TPR.G19120 Trifolium pratense HOM05D000651 ORTHO05D003990 5.1e-12 76.6 99 48.5
Cfa020037 Carpinus fangiana HOM05D015316 ORTHO05D003990 6.6e-12 76.3 73 52.1
SGA_v2.0_scaffold39G15180 Striga asiatica HOM05D000651 ORTHO05D003990 6.6e-12 76.3 118 42.4
Eucgr.J02425 Eucalyptus grandis HOM05D000651 ORTHO05D003990 1.1e-11 75.5 196 36.2
CSS0040679 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 1.5e-11 75.1 240 31.7
FAN22G1281 Fragaria x ananassa HOM05D000137 ORTHO05D000503 1.5e-11 75.1 138 39.1
TAR629G0208 Trochodendron aralioides HOM05D008822 ORTHO05D003990 1.5e-11 75.1 99 42.4
Nitab4.5_0007359g0040 Nicotiana tabacum HOM05D000651 ORTHO05D003990 1.9e-11 74.7 71 52.1
Sopen11g008610 Solanum pennellii HOM05D000651 ORTHO05D003990 1.9e-11 74.7 165 35.2
TWI31G1292 Tripterygium wilfordii HOM05D000651 ORTHO05D003990 1.9e-11 74.7 133 38.3
AUR62042685 Chenopodium quinoa HOM05D008822 ORTHO05D003990 2.5e-11 74.3 94 40.4
Eucgr.J02424 Eucalyptus grandis HOM05D008822 ORTHO05D003990 2.5e-11 74.3 113 40.7
EL10Ac1g00119 Beta vulgaris HOM05D000294 ORTHO05D003990 3.3e-11 73.9 132 41.7
RcHm_v2.0_Chr4g0441381 Rosa chinensis HOM05D000651 ORTHO05D003990 3.3e-11 73.9 79 53.2
TPR.G19130 Trifolium pratense HOM05D000651 ORTHO05D003990 3.3e-11 73.9 107 43.0
TPR.G32510 Trifolium pratense HOM05D000651 ORTHO05D003990 3.3e-11 73.9 99 48.5
Ciclev10015830m.g Citrus clementina HOM05D000651 ORTHO05D003990 5.6e-11 73.2 206 34.0
FvH4_4g32502 Fragaria vesca HOM05D000651 ORTHO05D003990 5.6e-11 73.2 157 33.8
Nitab4.5_0000426g0240 Nicotiana tabacum HOM05D000651 ORTHO05D003990 7.3e-11 72.8 153 34.0
Rhsim09G0066300 Rhododendron simsii HOM05D000651 ORTHO05D003990 7.3e-11 72.8 125 38.4
TWI79G0768 Tripterygium wilfordii HOM05D000651 ORTHO05D003990 7.3e-11 72.8 142 39.4
arahy.Tifrunner.gnm1.ann1.YH1KLB Arachis hypogaea HOM05D000651 ORTHO05D003990 9.5e-11 72.4 80 52.5
COL.COLO4_20494 Corchorus olitorius HOM05D000651 ORTHO05D003990 1.2e-10 72.0 122 40.2
CsaV3_5G028450 Cucumis sativus L. HOM05D021888 ORTHO05D003990 1.2e-10 72.0 253 31.2
Solyc11g013680.1 Solanum lycopersicum HOM05D000651 ORTHO05D003990 2.1e-10 71.2 103 40.8
Cc11_g08570 Coffea canephora HOM05D000651 ORTHO05D003990 2.8e-10 70.9 114 41.2
CSS0042175 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 3.6e-10 70.5 240 30.8
AUR62032767 Chenopodium quinoa HOM05D008822 ORTHO05D003990 3.6e-10 70.5 133 34.6
Solyc04g007720.3 Solanum lycopersicum HOM05D000651 ORTHO05D003990 3.6e-10 70.5 79 44.3
Sopen10g027720 Solanum pennellii HOM05D000651 ORTHO05D003990 3.6e-10 70.5 137 35.0
PGSC0003DMG402005954 Solanum tuberosum HOM05D000651 ORTHO05D003990 3.6e-10 70.5 79 44.3
CSS0042277 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 6.2e-10 69.7 153 34.0
Duzib251G0891 Durio zibethinus HOM05D000651 ORTHO05D003990 6.2e-10 69.7 244 31.6
CSS0020544 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 8.1e-10 69.3 301 30.9
Sopen04g002810 Solanum pennellii HOM05D000651 ORTHO05D003990 8.1e-10 69.3 79 43.0
CSS0022216 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 1.1e-09 68.9 242 32.2
Dinv14425 Davidia involucrata HOM05D008822 ORTHO05D003990 1.1e-09 68.9 57 63.2
PGR042G3954 Punica granatum HOM05D000651 ORTHO05D003990 1.1e-09 68.9 168 33.9
Ah.04g154370 Amaranthus hybridus HOM05D000294 ORTHO05D003990 1.4e-09 68.6 60 55.0
Aqoxy7G03756 Aquilegia oxysepala HOM05D000294 ORTHO05D003990 1.8e-09 68.2 70 48.6
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 2.3e-09 67.8 191 33.0
A10p28000 Brassica napus HOM05D008822 ORTHO05D003990 2.3e-09 67.8 67 50.7
BraA10t44850Z Brassica rapa HOM05D008822 ORTHO05D003990 2.3e-09 67.8 67 50.7
BcaB08g37226 Brassica carinata HOM05D008822 ORTHO05D003990 3.1e-09 67.4 102 39.2
SGA_v2.0_scaffold50G18496 Striga asiatica HOM05D008822 ORTHO05D003990 3.1e-09 67.4 68 51.5
QL10p040527 Quercus lobata HOM05D015316 ORTHO05D003990 4.0e-09 67.0 166 36.7
CSS0033557 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 5.2e-09 66.6 166 32.5
DCAR_007300 Daucus carota HOM05D002189 ORTHO05D002233 5.2e-09 66.6 84 44.0
Lsat_1_v5_gn_3_55381 Lactuca sativa HOM05D008822 ORTHO05D003990 5.2e-09 66.6 69 49.3
Hund01243 Selenicereus undatus HOM05D008822 ORTHO05D003990 5.2e-09 66.6 181 33.1
Aa31LG3G17790 Aethionema arabicum HOM05D008822 ORTHO05D003990 8.9e-09 65.9 104 35.6
AL6G19530 Arabidopsis lyrata HOM05D008822 ORTHO05D003990 8.9e-09 65.9 67 46.3
Migut.L00358 Erythranthe guttata HOM05D000651 ORTHO05D003990 1.2e-08 65.5 62 51.6
Solyc11g013600.2 Solanum lycopersicum HOM05D000651 ORTHO05D003990 1.2e-08 65.5 77 44.2
C09p68200 Brassica napus HOM05D008822 ORTHO05D003990 1.5e-08 65.1 67 46.3
vmacro00413 Vaccinium macrocarpon HOM05D008822 ORTHO05D003990 2.0e-08 64.7 95 42.1
Thhalv10015336m.g Eutrema salsugineum HOM05D008822 ORTHO05D003990 2.6e-08 64.3 98 35.7
Potri.005G069700 Populus trichocarpa HOM05D008822 ORTHO05D050460 4.4e-08 63.5 167 33.5
EL10As3g23335 Beta vulgaris HOM05D000294 ORTHO05D000177 5.8e-08 63.2 92 44.6
DCAR_007298 Daucus carota HOM05D008822 ORTHO05D003990 5.8e-08 63.2 248 27.8
HanXRQChr15g0476841 Helianthus annuus HOM05D008822 ORTHO05D003990 5.8e-08 63.2 69 44.9
Nn4g24185 Nelumbo nucifera HOM05D008822 ORTHO05D003990 5.8e-08 63.2 152 32.9
unitig_0.g2324 Utricularia gibba HOM05D000651 ORTHO05D003990 5.8e-08 63.2 116 37.9
CANSAT35G0183 Cannabis sativa HOM05D008822 ORTHO05D003990 7.6e-08 62.8 265 27.2
AT5G08780 Arabidopsis thaliana HOM05D008822 ORTHO05D003990 9.9e-08 62.4 67 43.3
CiPaw.03G044500 Carya illinoinensis HOM05D015316 ORTHO05D003990 9.9e-08 62.4 206 28.6
TPR.G32483 Trifolium pratense HOM05D000651 ORTHO05D003990 9.9e-08 62.4 63 54.0
arahy.Tifrunner.gnm1.ann1.MKJD0U Arachis hypogaea HOM05D000651 ORTHO05D003990 1.7e-07 61.6 92 48.9
Prupe.5G053600 Prunus persica HOM05D015272 ORTHO05D003990 1.7e-07 61.6 230 30.0
Sed0005667 Sechium edule HOM05D021888 ORTHO05D003990 3.7e-07 60.5 243 27.6
CiPaw.04G078100 Carya illinoinensis HOM05D015316 ORTHO05D003990 4.9e-07 60.1 171 34.5
MBI19_g32901_MAGBIO Magnolia biondii HOM05D008822 ORTHO05D003990 8.4e-07 59.3 65 49.2
Carub.0006s0775 Capsella rubella HOM05D008822 ORTHO05D003990 1.1e-06 58.9 69 46.4
GSVIVG01011748001 Vitis vinifera HOM05D008822 ORTHO05D003990 1.4e-06 58.5 112 33.9
SalBow8G0982 Salvia bowleyana HOM05D008822 ORTHO05D003990 3.2e-06 57.4 251 25.9
Dinv28206 Davidia involucrata HOM05D002447 ORTHO05D001298 4.1e-06 57.0 65 40.0
QL10p028121 Quercus lobata HOM05D008822 ORTHO05D003990 4.1e-06 57.0 144 32.6
HanXRQChr04g0113671 Helianthus annuus HOM05D001085 ORTHO05D000895 5.4e-06 56.6 64 43.8
PSO357G0295 Papaver somniferum HOM05D001085 ORTHO05D000895 7.1e-06 56.2 74 40.5
Prupe.1G325800 Prunus persica HOM05D021888 ORTHO05D003990 7.1e-06 56.2 152 34.2
Oeu003381.1 Olea europaea HOM05D000651 ORTHO05D003990 9.2e-06 55.8 145 34.5


User provided reference genes

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