Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.4e-179 632.9 332 100.0
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.7e-169 599.4 322 97.8
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.3e-119 433.7 322 73.6
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.8e-118 429.9 322 72.4
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 2.6e-117 426.0 332 72.9
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 3.5e-114 415.6 328 70.4
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 3.9e-113 412.1 322 72.7
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 4.3e-112 408.7 328 69.5
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 6.3e-111 404.8 326 67.8
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 6.3e-111 404.8 329 67.8
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 6.9e-110 401.4 324 68.5
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 7.6e-109 397.9 331 66.2
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 5.5e-107 391.7 331 64.4
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.8e-105 386.7 329 65.7
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.3e-105 386.3 333 63.7
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 3.0e-105 386.0 328 66.2
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 5.7e-104 381.7 341 62.5
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 7.4e-104 381.3 335 63.6
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 4.8e-103 378.6 343 61.8
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.8e-102 376.7 225 85.3
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.2e-101 374.0 340 60.9
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 7.7e-101 371.3 334 62.3
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 1.0e-100 370.9 337 61.4
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.7e-100 370.2 337 61.4
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 3.8e-100 369.0 245 79.2
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 6.5e-100 368.2 343 60.6
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 6.5e-100 368.2 337 61.1
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 6.5e-100 368.2 328 62.5
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 8.5e-100 367.9 340 61.2
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 8.5e-100 367.9 336 62.2
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.5e-99 366.3 342 60.8
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 3.2e-99 365.9 328 61.0
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 5.5e-99 365.2 328 60.7
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 5.5e-99 365.2 328 60.7
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 7.2e-99 364.8 328 61.0
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 2.1e-98 363.2 329 60.5
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.7e-98 362.8 331 62.2
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 3.6e-98 362.5 335 60.6
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.4e-97 360.5 343 60.1
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-97 360.5 331 62.2
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.4e-97 360.5 335 60.3
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.8e-97 360.1 337 61.1
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.8e-97 360.1 344 59.9
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.8e-97 360.1 331 61.9
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.8e-97 360.1 331 61.9
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.8e-97 360.1 320 64.1
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 2.3e-97 359.8 310 67.1
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.9e-97 359.0 236 78.0
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 3.9e-97 359.0 340 60.3
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 5.1e-97 358.6 292 66.1
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.5e-96 357.1 247 75.7
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 2.6e-96 356.3 307 65.1
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 2.6e-96 356.3 309 64.7
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 3.3e-96 355.9 323 62.2
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.3e-96 355.9 334 61.4
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.7e-96 355.1 341 60.1
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 2.2e-95 353.2 339 61.1
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 2.8e-95 352.8 249 73.9
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.7e-95 352.4 322 63.7
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 4.8e-95 352.1 346 60.4
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 6.3e-95 351.7 295 65.4
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.1e-94 350.9 341 58.9
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 5.3e-94 348.6 255 72.9
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 6.9e-94 348.2 295 62.7
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 9.1e-94 347.8 340 59.1
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 2.0e-93 346.7 243 74.1
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 4.5e-93 345.5 232 77.2
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 5.9e-93 345.1 261 69.0
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 7.7e-93 344.7 327 60.2
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.3e-92 344.0 261 69.0
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.2e-92 343.2 324 61.4
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 1.1e-91 340.9 246 74.8
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.9e-91 340.1 296 63.9
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.5e-91 339.7 213 81.2
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 7.2e-91 338.2 324 58.6
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 9.4e-91 337.8 336 57.4
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 2.1e-90 336.7 264 67.4
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 4.7e-90 335.5 245 73.9
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 4.7e-90 335.5 294 62.9
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.0e-89 334.3 231 75.8
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 2.3e-89 333.2 324 58.6
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 2.3e-89 333.2 338 58.3
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 9.7e-88 327.8 202 79.7
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 8.2e-87 324.7 264 65.5
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 1.4e-86 323.9 305 60.0
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 3.1e-86 322.8 222 75.7
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.6e-85 320.5 250 66.0
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 5.9e-85 318.5 388 50.8
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 2.9e-84 316.2 300 60.0
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 2.9e-84 316.2 345 56.8
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.9e-84 316.2 339 54.0
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 3.8e-84 315.8 393 49.6
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 3.8e-84 315.8 328 57.9
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 3.8e-84 315.8 245 69.4
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.9e-83 313.5 259 64.9
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 5.5e-83 312.0 268 61.6
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 7.2e-83 311.6 326 55.8
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 7.2e-83 311.6 292 58.6
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 4.0e-81 305.8 222 71.6
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.1e-78 297.7 229 69.9
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 2.4e-78 296.6 220 70.9
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.0e-72 276.9 274 57.3
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 3.4e-72 276.2 310 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 4.4e-72 275.8 238 58.8
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 5.7e-72 275.4 285 56.8
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 3.5e-69 266.2 319 53.0
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.4e-64 249.2 162 77.2
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 2.7e-61 240.0 223 54.3
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 7.8e-61 238.4 219 54.8
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 6.6e-60 235.3 216 57.4
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.1e-59 234.6 260 55.0
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.0e-57 226.1 219 53.9
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 7.5e-56 221.9 358 43.9
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.7e-55 219.5 223 51.1
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 2.7e-53 213.4 141 76.6
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 2.7e-53 213.4 130 81.5
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.5e-51 207.6 131 81.7
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 5.2e-49 199.1 141 71.6
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.9e-43 180.6 112 78.6
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.4e-38 163.7 102 77.5
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.3e-28 131.3 90 74.4
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 6.6e-28 129.0 216 36.6
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.2e-23 114.0 82 74.4
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 6.4e-23 112.5 69 82.6
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 8.4e-23 112.1 87 66.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-20 104.4 162 39.5
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 1.3e-18 98.2 62 75.8
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 5.1e-12 76.3 48 83.3
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 9.6e-11 72.0 37 94.6
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 9.9e-08 62.0 263 24.7
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 2.2e-07 60.8 33 90.9
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 7.1e-06 55.8 126 34.9


User provided reference genes

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