Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 2.6e-275 951.4 490 100.0
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.3e-181 640.2 348 97.4
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 9.4e-148 527.7 373 74.5
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 2.0e-145 520.0 375 73.6
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 9.8e-145 517.7 373 73.7
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 2.0e-142 510.0 373 74.3
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 1.0e-133 481.1 375 71.5
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 2.3e-133 479.9 376 68.6
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 6.2e-131 471.9 372 71.0
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 2.6e-129 466.5 373 69.7
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.2e-113 414.5 376 62.8
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 2.9e-112 409.8 377 61.0
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 4.1e-111 406.0 377 59.2
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 7.8e-110 401.7 380 60.3
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 3.9e-109 399.4 378 58.2
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 9.6e-108 394.8 375 58.7
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 4.7e-107 392.5 376 58.0
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 6.2e-107 392.1 377 59.4
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 8.1e-107 391.7 385 58.4
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 1.1e-106 391.3 379 58.6
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 3.4e-105 386.3 374 57.5
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 4.9e-104 382.5 379 55.4
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-103 381.3 380 57.6
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.4e-103 380.9 380 57.9
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 1.9e-103 380.6 353 61.8
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 7.1e-103 378.6 376 56.6
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 1.2e-102 377.9 380 56.6
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.1e-102 377.1 377 56.8
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.1e-102 377.1 380 57.4
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.7e-102 376.7 377 57.0
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 1.0e-101 374.8 376 56.6
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.3e-101 374.4 373 56.8
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 1.3e-101 374.4 381 55.6
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 1.3e-101 374.4 376 55.3
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 5.1e-101 372.5 372 57.3
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 8.7e-101 371.7 378 55.3
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 3.3e-100 369.8 312 65.7
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 3.3e-100 369.8 377 56.8
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 2.1e-99 367.1 380 56.6
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 3.6e-99 366.3 381 55.1
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 6.2e-99 365.5 380 54.7
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 6.2e-99 365.5 377 54.9
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 1.4e-98 364.4 381 55.1
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 4.0e-98 362.8 365 56.7
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 6.9e-98 362.1 377 55.2
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 9.0e-98 361.7 377 54.9
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 9.0e-98 361.7 378 56.6
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 3.4e-97 359.8 380 55.3
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 5.8e-97 359.0 365 56.2
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 9.9e-97 358.2 376 54.5
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 4.9e-96 355.9 377 54.6
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 6.4e-96 355.5 376 54.3
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 1.4e-95 354.4 374 54.3
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 3.2e-95 353.2 377 54.6
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 3.9e-93 346.3 372 54.0
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 1.5e-92 344.4 372 54.0
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 3.3e-92 343.2 395 52.2
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 2.1e-91 340.5 378 52.4
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 2.1e-91 340.5 378 52.6
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 8.1e-91 338.6 382 52.9
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.4e-90 337.8 372 52.4
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 4.0e-90 336.3 377 53.3
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.2e-89 334.7 372 52.2
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 2.0e-89 334.0 377 51.7
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 5.5e-87 325.9 378 50.3
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 5.5e-87 325.9 362 54.4
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 7.1e-87 325.5 378 50.0
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.6e-86 324.3 382 49.5
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 2.1e-86 323.9 378 50.0
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.1e-86 323.9 378 48.4
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.1e-86 323.9 378 48.4
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 2.7e-86 323.6 379 52.2
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 2.7e-86 323.6 392 51.0
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 1.8e-85 320.9 376 51.1
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 2.3e-85 320.5 382 48.7
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 2.3e-85 320.5 380 48.2
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 3.9e-85 319.7 390 48.2
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 5.1e-85 319.3 378 49.2
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 6.7e-85 318.9 382 49.7
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 1.5e-84 317.8 333 52.0
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 2.5e-84 317.0 382 49.0
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 5.6e-84 315.8 379 49.3
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.3e-83 314.7 379 49.3
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.6e-83 314.3 402 47.0
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 2.1e-83 313.9 384 49.7
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 4.8e-83 312.8 282 59.9
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 2.0e-81 307.4 372 49.5
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 1.0e-80 305.1 378 49.5
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 2.9e-80 303.5 384 47.7
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 7.1e-79 298.9 259 64.5
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 3.7e-75 286.6 354 47.7
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 6.3e-75 285.8 389 43.4
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.2e-73 281.6 384 46.4
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 2.0e-73 280.8 343 49.9
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 7.4e-60 235.7 225 60.9
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.4e-58 231.5 387 39.8
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 1.9e-55 221.1 382 38.7
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 6.1e-54 216.1 256 50.0
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 3.3e-52 210.3 369 38.2
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 5.3e-50 203.0 199 55.3
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 4.8e-43 179.9 169 59.2
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 4.8e-43 179.9 373 34.6
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 8.2e-43 179.1 170 61.8
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.8e-42 177.9 237 46.4
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 4.2e-39 166.8 169 56.2
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 1.2e-36 158.7 175 51.4
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.2e-36 158.7 258 39.5
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.4e-34 151.0 166 50.6
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 3.0e-29 134.0 153 51.0
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 1.7e-27 128.3 375 30.9
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 3.1e-26 124.0 142 52.1
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 2.7e-25 120.9 154 46.1
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.3e-24 118.6 145 48.3
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 2.1e-22 111.3 154 42.9
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 8.6e-16 89.4 438 26.0
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.3e-15 86.3 164 36.6
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.6e-14 84.0 164 36.0
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.5e-12 78.6 158 32.9
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 5.4e-10 70.1 71 49.3
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 2.0e-09 68.2 66 53.0
Psat0s1013g0040 Pisum sativum HOM05D006028 ORTHO05D007784 1.3e-08 65.5 53 66.0
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.5e-07 62.0 75 44.0


User provided reference genes

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