Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 2.1e-290 1002.3 776 100.0
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 2.7e-165 586.6 811 68.3
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.1e-162 577.0 775 68.5
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.8e-154 550.1 809 69.5
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.0e-151 541.6 784 68.2
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.9e-151 540.0 784 67.1
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 3.7e-146 523.1 541 60.8
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.2e-144 518.1 534 60.1
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 3.6e-141 506.5 794 55.8
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 1.7e-135 487.6 789 55.0
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 7.5e-131 472.2 551 55.5
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 1.3e-130 471.5 586 76.5
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 1.3e-127 461.5 354 72.6
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 6.5e-127 459.1 558 53.9
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.2e-126 456.8 557 54.9
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 7.2e-126 455.7 783 53.0
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.6e-125 454.5 557 46.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 6.1e-125 452.6 364 70.9
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 8.0e-125 452.2 364 59.6
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.3e-124 450.7 553 56.8
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.5e-123 448.0 593 75.4
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 3.4e-123 446.8 364 69.8
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 7.5e-123 445.7 589 74.5
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.3e-122 444.9 535 54.0
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 4.8e-122 443.0 353 67.7
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 8.3e-122 442.2 541 54.7
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 2.0e-120 437.6 778 60.5
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 2.7e-120 437.2 582 74.7
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 3.5e-120 436.8 351 71.2
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 3.5e-120 436.8 450 60.9
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.5e-120 436.4 485 58.4
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 5.9e-120 436.0 588 66.3
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.0e-119 435.3 353 68.6
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 6.5e-119 432.6 790 62.5
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.1e-118 431.8 589 74.7
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 1.5e-118 431.4 773 63.8
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.5e-118 431.4 366 66.9
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 4.2e-118 429.9 714 64.1
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 7.2e-118 429.1 353 71.1
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 7.2e-118 429.1 364 63.7
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 9.5e-118 428.7 787 59.3
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.2e-117 428.3 363 67.8
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 2.1e-117 427.6 542 54.1
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 2.8e-117 427.2 364 69.0
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.6e-117 426.8 357 68.3
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 8.0e-117 425.6 364 56.6
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.0e-116 425.2 588 73.6
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.8e-116 424.5 782 61.4
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.8e-116 424.5 364 67.6
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.3e-116 424.1 778 62.6
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 2.3e-116 424.1 538 53.2
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 2.3e-116 424.1 779 61.2
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 2.3e-116 424.1 779 61.2
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 3.0e-116 423.7 362 67.4
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.2e-115 421.8 362 65.2
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.2e-115 421.8 582 72.0
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.6e-115 420.6 364 65.9
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.4e-115 420.2 364 65.9
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 5.7e-115 419.5 778 62.5
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.7e-114 417.9 352 68.8
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 3.1e-113 413.7 348 69.8
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.1e-113 413.3 364 65.7
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 4.5e-112 409.8 781 63.0
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.8e-111 406.8 588 67.0
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 3.8e-111 406.8 353 67.7
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 6.6e-111 406.0 556 50.0
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 6.6e-111 406.0 356 64.3
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 2.5e-110 404.1 354 64.1
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.3e-110 403.7 359 65.5
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 4.3e-110 403.3 337 69.7
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 5.6e-110 402.9 362 64.9
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.8e-109 400.6 570 48.4
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 8.0e-109 399.1 364 64.6
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.0e-108 398.7 348 62.1
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.4e-108 398.3 348 67.8
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 1.8e-108 397.9 353 67.1
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 2.3e-108 397.5 565 50.3
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.3e-108 397.5 574 48.3
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 6.8e-108 396.0 348 62.9
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 8.9e-108 395.6 348 67.2
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 1.5e-107 394.8 589 69.6
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.3e-106 391.7 563 75.0
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.7e-106 391.3 566 48.8
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.7e-106 391.3 566 48.8
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 2.2e-106 391.0 353 66.0
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.4e-105 388.3 553 74.7
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 2.0e-104 384.4 351 66.7
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 3.5e-104 383.6 328 66.5
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 5.0e-103 379.8 364 62.6
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 5.0e-103 379.8 542 75.5
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 8.9e-100 369.0 550 49.1
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 9.2e-97 359.0 353 62.3
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 1.6e-96 358.2 364 58.2
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.7e-96 357.5 355 62.3
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.7e-96 357.5 355 62.3
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 3.0e-95 354.0 355 62.8
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 9.5e-94 349.0 355 61.4
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 2.8e-93 347.4 373 58.4
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.4e-92 345.1 355 61.1
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 5.8e-91 339.7 359 59.3
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 3.5e-88 330.5 359 58.8
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 7.1e-73 279.6 200 65.0
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 6.2e-69 266.5 365 43.0
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 5.1e-63 246.9 530 41.7
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 2.7e-56 224.6 289 43.9
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.0e-55 222.6 212 52.4
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.4e-43 181.0 359 35.9
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.4e-41 175.6 376 39.1
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 6.1e-32 143.7 383 37.9
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 5.5e-25 120.6 146 40.4
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 6.1e-24 117.1 197 54.8
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 4.5e-19 100.9 59 74.6
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 1.3e-18 99.4 139 39.6
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 3.6e-08 64.7 55 56.4


User provided reference genes

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