Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 0.0e+00 1113.6 545 100.0
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 7.7e-300 1033.1 537 94.8
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.7e-251 872.5 549 78.1
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 9.5e-250 866.7 540 78.5
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 2.8e-249 865.1 541 78.0
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 4.7e-249 864.4 553 77.9
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 9.2e-245 850.1 465 85.8
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 4.6e-244 847.8 521 79.1
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 2.3e-243 845.5 492 81.9
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 4.3e-242 841.3 497 81.7
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 1.8e-240 835.9 468 83.5
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 6.9e-240 833.9 467 84.8
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 9.0e-240 833.6 467 84.4
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.2e-239 833.2 523 76.1
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 2.6e-239 832.0 572 73.8
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 4.4e-239 831.2 460 84.1
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 5.8e-239 830.9 474 83.1
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.4e-237 826.2 549 74.1
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 2.4e-237 825.5 460 84.6
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 7.1e-237 823.9 474 82.5
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.6e-236 822.8 474 82.7
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 6.0e-236 820.8 485 80.0
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 7.8e-236 820.5 554 73.3
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 1.7e-235 819.3 551 75.0
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 3.9e-235 818.1 539 74.6
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.5e-234 816.2 465 82.2
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 3.3e-234 815.1 463 82.9
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 9.6e-234 813.5 543 73.8
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.3e-233 813.1 509 76.6
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 1.4e-232 809.7 460 81.7
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 4.0e-232 808.1 463 81.4
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 4.0e-232 808.1 553 73.1
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.2e-230 802.4 557 70.6
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 2.9e-230 802.0 517 74.9
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 8.4e-230 800.4 603 67.2
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 1.4e-229 799.7 538 72.3
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.4e-229 799.7 465 80.9
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.9e-229 799.3 538 72.3
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 9.3e-229 797.0 538 72.1
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 4.6e-228 794.7 460 81.3
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 1.0e-227 793.5 552 71.4
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.0e-227 793.5 460 81.1
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-227 793.1 538 71.4
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 1.5e-226 789.6 460 80.2
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.9e-226 789.3 460 79.6
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 7.4e-226 787.3 540 71.3
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 1.3e-225 786.6 466 79.6
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 4.8e-225 784.6 466 79.4
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.8e-224 782.7 537 71.7
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 2.4e-224 782.3 466 78.5
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 6.9e-224 780.8 514 73.2
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 6.9e-224 780.8 625 64.5
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 9.9e-223 776.9 560 72.7
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 9.9e-223 776.9 569 69.2
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 9.9e-223 776.9 515 71.5
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.3e-222 776.5 521 72.7
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 2.2e-222 775.8 480 76.0
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.8e-222 775.0 482 76.1
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 4.9e-222 774.6 482 75.7
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 1.1e-221 773.5 465 77.6
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.1e-221 773.5 545 69.2
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.9e-221 772.7 460 76.7
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 2.4e-221 772.3 461 77.9
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 3.2e-221 771.9 471 76.2
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 7.1e-221 770.8 474 78.7
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.2e-220 770.0 460 78.5
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 1.6e-220 769.6 506 72.1
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 2.7e-220 768.8 460 77.6
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 2.7e-220 768.8 536 70.0
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 3.5e-220 768.5 462 76.6
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 4.6e-220 768.1 486 73.3
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 2.3e-219 765.8 533 69.0
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 3.0e-219 765.4 472 76.1
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 3.0e-219 765.4 460 77.6
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 3.9e-219 765.0 485 75.5
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 5.1e-219 764.6 460 79.1
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 6.7e-219 764.2 483 75.2
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 6.7e-219 764.2 460 76.3
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 8.7e-219 763.8 528 69.3
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 2.5e-218 762.3 472 75.6
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 5.6e-218 761.1 519 69.6
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 9.6e-218 760.4 552 67.4
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.6e-217 759.6 516 71.3
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 2.1e-217 759.2 518 70.8
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 2.8e-217 758.8 516 71.3
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 4.8e-217 758.1 547 68.4
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 1.0e-214 750.4 504 71.6
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-214 750.0 446 78.5
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 3.8e-214 748.4 488 74.2
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.9e-213 746.1 459 76.0
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 2.5e-213 745.7 474 75.3
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 5.5e-213 744.6 483 72.9
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 1.8e-211 739.6 512 70.9
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 2.3e-211 739.2 466 74.9
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 3.0e-211 738.8 660 58.6
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 3.2e-205 718.8 436 75.5
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.1e-204 716.1 421 77.9
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 7.9e-204 714.1 421 77.7
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 1.2e-199 700.3 507 67.5
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.5e-199 699.9 484 69.0
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.9e-198 695.7 542 64.0
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 5.0e-198 694.9 498 67.5
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.9e-195 685.3 467 69.6
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 7.4e-194 681.0 382 84.6
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 5.5e-189 664.8 437 70.9
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 6.7e-187 657.9 464 65.1
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.5e-186 656.8 458 65.7
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 3.7e-185 652.1 477 66.0
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 3.7e-185 652.1 421 72.2
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 5.0e-182 641.7 464 64.4
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.6e-180 636.7 464 63.8
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 6.1e-180 634.8 442 66.1
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 3.3e-178 629.0 525 57.7
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 2.9e-174 615.9 458 64.0
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 6.1e-172 608.2 459 63.0
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.8e-171 606.7 452 63.1
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.2e-171 605.1 347 81.3
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 5.2e-171 605.1 463 65.7
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 7.5e-170 601.3 473 61.3
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 1.8e-160 570.1 480 57.7
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 6.0e-151 538.5 461 57.7
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 7.3e-141 505.0 355 68.7
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.7e-137 492.7 398 62.1
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.7e-126 457.2 255 82.4
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 2.5e-125 453.4 421 52.7
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 4.6e-119 432.6 502 48.4
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 3.9e-118 429.5 343 63.3
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.4e-114 416.4 316 66.1
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.9e-105 386.7 261 69.3
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 3.4e-98 363.2 325 59.4
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 3.9e-94 349.7 251 71.3
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.8e-89 333.2 214 68.7
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 5.0e-89 332.8 255 61.2
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 1.2e-79 301.6 240 60.8
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 4.2e-64 250.0 144 84.0
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 5.5e-64 249.6 158 75.3
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 5.5e-56 223.0 176 60.8
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 2.3e-49 201.1 178 62.9
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.6e-45 187.6 113 75.2
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 1.5e-40 171.8 157 58.6
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 3.6e-39 167.2 100 80.0
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 8.0e-39 166.0 115 70.4
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.5e-37 161.8 91 79.1
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.6e-34 150.2 129 59.7
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 2.1e-23 114.8 113 58.4
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 6.2e-15 86.7 57 61.4
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 6.8e-14 83.2 57 68.4
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 2.2e-12 78.2 52 78.8
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 2.2e-12 78.2 52 78.8
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.4e-11 75.5 62 66.1
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 7.3e-08 63.2 55 65.5


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