Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 1.5e-119 433.3 299 100.0
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 3.7e-102 375.6 306 89.5
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 1.5e-71 273.9 241 78.0
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 1.7e-46 190.7 310 57.4
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 2.5e-42 176.8 310 56.1
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 8.3e-38 161.8 319 51.4
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 4.3e-34 149.4 319 48.9
arahy.Tifrunner.gnm1.ann1.M24HCJ Arachis hypogaea HOM05D006785 ORTHO05D006259 1.1e-32 144.8 164 73.2
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 2.6e-31 140.2 293 49.1
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 1.1e-29 134.8 304 44.4
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.6e-28 131.0 324 44.8
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 1.7e-27 127.5 306 40.5
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 1.7e-27 127.5 317 47.0
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 2.3e-27 127.1 313 45.4
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 3.6e-25 119.8 317 46.4
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 4.7e-25 119.4 300 48.7
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 8.1e-25 118.6 300 49.7
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 2.3e-24 117.1 318 41.8
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 3.1e-24 116.7 304 46.4
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 3.4e-23 113.2 295 32.5
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 3.4e-23 113.2 316 39.6
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 5.8e-23 112.5 311 40.8
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 1.7e-22 110.9 249 34.9
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 2.9e-22 110.2 317 43.5
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 4.9e-22 109.4 303 38.9
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 1.9e-21 107.5 246 34.6
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 2.4e-21 107.1 304 43.1
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 2.4e-21 107.1 294 33.3
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 3.2e-21 106.7 299 32.8
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 9.2e-21 105.1 247 38.9
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 3.0e-19 100.1 337 35.9
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 4.3e-18 96.3 295 43.4
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 4.7e-17 92.8 333 36.9
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 4.7e-17 92.8 248 35.9
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 6.2e-17 92.4 241 42.7
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 5.8e-15 85.9 306 37.6
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.3e-14 84.7 315 28.9
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 2.9e-14 83.6 204 37.3
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 4.9e-14 82.8 308 28.9
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 4.9e-14 82.8 308 28.9
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 3.2e-13 80.1 303 30.0
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 4.2e-13 79.7 217 32.7
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 5.4e-13 79.3 247 38.1
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 9.2e-13 78.6 318 28.6
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 1.0e-11 75.1 292 40.1
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 3.0e-11 73.6 245 37.6
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 8.7e-11 72.0 236 32.6
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 8.7e-11 72.0 294 34.0
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.9e-10 70.9 165 43.0
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 3.3e-10 70.1 240 32.1
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 4.3e-10 69.7 294 33.0
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 9.6e-10 68.6 236 31.8
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 2.1e-09 67.4 296 36.1
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 2.1e-09 67.4 182 31.3
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 2.8e-09 67.0 234 31.2
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 2.8e-09 67.0 307 36.8
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 4.8e-09 66.2 124 38.7
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 6.2e-09 65.9 296 34.5
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 1.1e-08 65.1 277 31.4
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 1.1e-08 65.1 294 39.1
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 1.8e-08 64.3 241 27.8
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.8e-08 64.3 294 33.7
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 5.3e-08 62.8 274 27.4
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 3.4e-07 60.1 233 35.6
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 9.9e-07 58.5 289 30.8
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.2e-06 57.4 302 31.5
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 2.2e-06 57.4 113 35.4
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 6.4e-06 55.8 121 35.5
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 6.4e-06 55.8 298 32.6


User provided reference genes

Program Settings