Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MLK8WM Arachis hypogaea HOM05D003893 ORTHO05D005167 3.9e-48 194.5 100 100.0
arahy.Tifrunner.gnm1.ann1.LQQ75E Arachis hypogaea HOM05D003893 ORTHO05D005167 4.0e-45 184.5 100 95.0
arahy.Tifrunner.gnm1.ann1.NA56E9 Arachis hypogaea HOM05D003893 ORTHO05D005167 3.9e-40 167.9 97 89.7
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 1.4e-37 159.5 85 95.3
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 5.2e-37 157.5 85 95.3
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 4.4e-36 154.5 85 91.8
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 4.4e-36 154.5 85 91.8
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 1.3e-35 152.9 85 90.6
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 1.7e-35 152.5 85 91.8
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 3.8e-35 151.4 85 89.4
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 6.4e-35 150.6 85 87.1
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 3.2e-34 148.3 85 89.4
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 5.4e-34 147.5 85 88.2
VMungo0251G2570 Vigna mungo HOM05D003893 ORTHO05D005167 5.4e-34 147.5 93 81.7
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 9.2e-34 146.7 85 87.1
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 2.3e-32 142.1 90 77.8
arahy.Tifrunner.gnm1.ann1.9S00H1 Arachis hypogaea HOM05D003893 ORTHO05D005167 1.9e-31 139.0 77 90.9
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 1.9e-31 139.0 85 80.0
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 1.9e-31 139.0 85 80.0
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 2.5e-31 138.7 85 78.8
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 3.3e-31 138.3 85 76.5
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 4.3e-31 137.9 90 75.6
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 4.3e-31 137.9 90 75.6
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 5.6e-31 137.5 90 75.6
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 5.6e-31 137.5 90 75.6
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 5.6e-31 137.5 90 75.6
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 5.6e-31 137.5 90 75.6
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 9.6e-31 136.7 85 78.8
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 9.6e-31 136.7 85 80.0
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 9.6e-31 136.7 90 75.6
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 1.6e-30 136.0 90 73.3
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 1.6e-30 136.0 90 74.4
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 1.6e-30 136.0 90 74.4
BcaNung07386 Brassica carinata HOM05D003893 ORTHO05D005167 1.6e-30 136.0 91 73.6
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 1.6e-30 136.0 90 74.4
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 1.6e-30 136.0 90 74.4
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.6e-30 136.0 88 76.1
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 1.6e-30 136.0 85 78.8
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 2.1e-30 135.6 90 73.3
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 2.1e-30 135.6 90 74.4
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 2.1e-30 135.6 90 75.6
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 3.6e-30 134.8 85 77.6
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 4.8e-30 134.4 85 78.8
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 1.1e-29 133.3 85 76.5
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 1.1e-29 133.3 85 78.8
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 1.4e-29 132.9 85 78.8
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 1.8e-29 132.5 90 72.2
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 1.8e-29 132.5 90 73.3
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 1.8e-29 132.5 85 78.8
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.8e-29 132.5 85 75.3
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 1.8e-29 132.5 85 76.5
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 2.4e-29 132.1 85 78.8
Hma1.2p1_0840F.1_g226640 Hydrangea macrophylla HOM05D003893 ORTHO05D005167 3.1e-29 131.7 90 71.1
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 4.0e-29 131.3 85 77.6
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 4.0e-29 131.3 85 77.6
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 4.0e-29 131.3 85 77.6
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 5.3e-29 131.0 85 75.3
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 5.3e-29 131.0 85 76.5
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 5.3e-29 131.0 90 68.9
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 9.0e-29 130.2 85 75.3
CDE12G0397 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 9.0e-29 130.2 93 66.7
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 1.2e-28 129.8 85 77.6
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 1.2e-28 129.8 85 75.3
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 1.2e-28 129.8 85 75.3
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 1.5e-28 129.4 85 76.5
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 2.0e-28 129.0 90 70.0
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 2.6e-28 128.6 90 70.0
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 3.4e-28 128.3 85 75.3
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 5.8e-28 127.5 85 76.5
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 7.6e-28 127.1 85 74.1
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 9.9e-28 126.7 90 71.1
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 1.3e-27 126.3 90 68.9
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 1.3e-27 126.3 85 70.6
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 2.2e-27 125.6 90 71.1
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 2.9e-27 125.2 90 70.0
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 4.9e-27 124.4 84 71.4
SalBow1G1311 Salvia bowleyana HOM05D003893 ORTHO05D005167 4.9e-27 124.4 90 68.9
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 4.9e-27 124.4 90 68.9
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 6.4e-27 124.0 90 70.0
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 8.4e-27 123.6 90 67.8
arahy.Tifrunner.gnm1.ann1.T8TVPL Arachis hypogaea HOM05D000826 ORTHO05D006448 1.1e-26 123.2 82 80.5
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.4e-26 122.9 85 72.9
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 1.4e-26 122.9 85 72.9
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.9e-26 122.5 85 72.9
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 1.9e-26 122.5 90 70.0
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 3.2e-26 121.7 90 66.7
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 9.3e-26 120.2 90 66.7
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 9.3e-26 120.2 90 63.3
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 1.2e-25 119.8 88 68.2
arahy.Tifrunner.gnm1.ann1.QNR9EZ Arachis hypogaea HOM05D000826 ORTHO05D006448 2.1e-25 119.0 82 79.3
Haze_08368 Corylus avellana HOM05D003893 ORTHO05D005167 7.8e-25 117.1 76 76.3
arahy.Tifrunner.gnm1.ann1.L0U5DT Arachis hypogaea HOM05D003893 ORTHO05D005167 3.0e-24 115.2 97 69.1
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 1.1e-23 113.2 85 64.7
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 7.3e-23 110.5 125 50.4
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 1.3e-22 109.8 85 64.7
arahy.Tifrunner.gnm1.ann1.BV66IC Arachis hypogaea HOM05D000826 ORTHO05D006448 2.8e-22 108.6 64 89.1
arahy.Tifrunner.gnm1.ann1.V6RYFZ Arachis hypogaea HOM05D000826 ORTHO05D006448 2.8e-22 108.6 64 89.1
arahy.Tifrunner.gnm1.ann1.AZ80GT Arachis hypogaea HOM05D000826 ORTHO05D006448 3.1e-21 105.1 60 90.0
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 1.5e-20 102.8 72 72.2
arahy.Tifrunner.gnm1.ann1.UB4SVV Arachis hypogaea HOM05D003893 ORTHO05D005167 1.9e-18 95.9 64 79.7
arahy.Tifrunner.gnm1.ann1.T26UD0 Arachis hypogaea HOM05D000826 ORTHO05D006448 3.2e-18 95.1 57 87.7
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 2.5e-15 85.5 85 49.4
arahy.Tifrunner.gnm1.ann1.FKEW18 Arachis hypogaea HOM05D003893 ORTHO05D005167 3.3e-15 85.1 47 91.5
arahy.Tifrunner.gnm1.ann1.3X15P1 Arachis hypogaea HOM05D000826 ORTHO05D006448 1.6e-14 82.8 46 89.1
SEGI_19363 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 9.0e-13 77.0 69 58.0
CBR_g21119 Chara braunii HOM05D000019 ORTHO05D005167 1.3e-11 73.2 86 41.9
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 1.1e-07 60.1 90 41.1


User provided reference genes

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