Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 2.1e-70 268.9 132 100.0
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 9.7e-31 137.1 122 59.8
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 1.7e-30 136.3 125 60.0
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 2.0e-28 129.4 130 56.2
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 6.5e-27 124.4 125 53.6
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 3.6e-25 118.6 120 50.8
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 4.7e-25 118.2 124 51.6
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 7.9e-25 117.5 119 52.1
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 1.0e-24 117.1 120 52.5
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 1.4e-24 116.7 124 54.0
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 1.4e-24 116.7 119 52.1
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 1.4e-24 116.7 124 50.8
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 1.4e-24 116.7 124 50.8
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 1.8e-24 116.3 121 50.4
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 3.0e-24 115.5 120 54.2
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 3.0e-24 115.5 119 50.4
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.9e-24 115.2 120 53.3
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 3.9e-24 115.2 124 53.2
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 5.1e-24 114.8 120 51.7
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 6.7e-24 114.4 119 51.3
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 8.8e-24 114.0 120 54.2
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 1.1e-23 113.6 120 48.3
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 1.1e-23 113.6 120 48.3
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.1e-23 113.6 120 49.2
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 1.1e-23 113.6 120 50.0
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 1.1e-23 113.6 118 52.5
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 1.5e-23 113.2 120 50.8
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 1.5e-23 113.2 120 48.3
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 2.0e-23 112.8 120 51.7
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 3.3e-23 112.1 120 50.0
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 4.4e-23 111.7 120 46.7
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 4.4e-23 111.7 120 52.5
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 4.4e-23 111.7 120 48.3
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 4.4e-23 111.7 118 50.0
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 4.4e-23 111.7 120 48.3
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 5.7e-23 111.3 124 49.2
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 9.7e-23 110.5 124 50.0
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 9.7e-23 110.5 121 51.2
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 1.3e-22 110.2 124 49.2
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 1.7e-22 109.8 120 48.3
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 1.7e-22 109.8 120 47.5
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 1.7e-22 109.8 120 48.3
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 2.2e-22 109.4 120 47.5
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 2.2e-22 109.4 120 46.7
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 2.8e-22 109.0 121 49.6
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 3.7e-22 108.6 124 48.4
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 3.7e-22 108.6 120 50.0
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 3.7e-22 108.6 120 47.5
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 4.8e-22 108.2 118 49.2
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 6.3e-22 107.8 120 47.5
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 6.3e-22 107.8 120 48.3
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 6.3e-22 107.8 120 48.3
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 6.3e-22 107.8 120 47.5
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 6.3e-22 107.8 120 49.2
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 8.2e-22 107.5 120 49.2
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 8.2e-22 107.5 120 49.2
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 8.2e-22 107.5 120 49.2
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 8.2e-22 107.5 120 49.2
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 8.2e-22 107.5 124 48.4
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 8.2e-22 107.5 120 48.3
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 8.2e-22 107.5 120 49.2
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 8.2e-22 107.5 121 49.6
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 1.1e-21 107.1 124 46.8
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 1.1e-21 107.1 124 47.6
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 1.1e-21 107.1 120 48.3
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 1.1e-21 107.1 120 49.2
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 1.4e-21 106.7 120 46.7
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 1.4e-21 106.7 117 48.7
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 1.8e-21 106.3 124 50.8
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.8e-21 106.3 118 49.2
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 2.4e-21 105.9 124 49.2
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 2.4e-21 105.9 120 48.3
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 2.4e-21 105.9 121 47.9
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 3.1e-21 105.5 120 46.7
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 5.3e-21 104.8 120 45.8
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 5.3e-21 104.8 116 47.4
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 5.3e-21 104.8 124 48.4
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 5.3e-21 104.8 118 48.3
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 6.9e-21 104.4 120 47.5
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 6.9e-21 104.4 117 48.7
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 1.2e-20 103.6 125 47.2
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 1.2e-20 103.6 118 50.0
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 1.5e-20 103.2 120 46.7
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 1.5e-20 103.2 120 46.7
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.0e-20 102.8 120 45.0
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 2.0e-20 102.8 116 45.7
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 2.0e-20 102.8 113 51.3
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.0e-20 102.8 120 50.0
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 2.6e-20 102.4 120 45.0
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 3.4e-20 102.1 120 44.2
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 3.4e-20 102.1 120 43.3
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 4.5e-20 101.7 117 44.4
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 5.9e-20 101.3 120 45.8
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 5.9e-20 101.3 116 51.7
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 5.9e-20 101.3 120 46.7
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 1.0e-19 100.5 114 44.7
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 2.2e-19 99.4 117 47.0
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 2.9e-19 99.0 118 44.9
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 3.8e-19 98.6 118 44.9
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 5.0e-19 98.2 118 44.9
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 6.5e-19 97.8 118 44.1
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 6.5e-19 97.8 118 49.2
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 8.5e-19 97.4 117 46.2
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 4.2e-18 95.1 118 46.6
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 5.5e-18 94.7 113 44.2
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 1.2e-17 93.6 118 47.5
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 1.2e-17 93.6 112 48.2
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 1.2e-17 93.6 112 48.2
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 1.6e-17 93.2 118 45.8
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 1.6e-17 93.2 118 45.8
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 2.1e-17 92.8 120 43.3
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 2.7e-17 92.4 118 45.8
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 1.0e-16 90.5 112 44.6
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.0e-16 90.5 118 39.0
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 1.4e-16 90.1 112 47.3
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 3.0e-16 89.0 112 46.4
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 3.9e-16 88.6 118 41.5
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 6.7e-16 87.8 113 40.7
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 8.8e-16 87.4 120 41.7
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 8.8e-16 87.4 110 45.5
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 2.6e-15 85.9 53 66.0
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 1.7e-14 83.2 71 62.0
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 1.7e-14 83.2 115 40.9
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 1.7e-14 83.2 112 42.9
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.8e-14 82.4 52 67.3
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 9.1e-13 77.4 118 39.0
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 3.5e-12 75.5 114 36.0
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 8.5e-11 70.9 111 38.7
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.6e-09 65.5 120 32.5
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 6.7e-08 61.2 39 66.7
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 3.3e-07 58.9 41 61.0
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 1.7e-06 56.6 114 35.1
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 8.2e-06 54.3 113 30.1


User provided reference genes

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