Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LTHE3G Arachis hypogaea HOM05D003177 ORTHO05D003481 3.8e-266 921.0 492 100.0
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.1e-255 886.3 495 96.4
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea HOM05D003177 ORTHO05D003481 2.6e-254 881.7 495 95.8
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea HOM05D003177 ORTHO05D003481 3.7e-253 877.9 495 95.6
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea HOM05D003177 ORTHO05D003481 1.2e-251 872.8 495 94.7
Lalb_Chr14g0366151 Lupinus albus HOM05D003177 ORTHO05D003481 2.8e-168 595.9 504 62.3
Lj3g0022760 Lotus japonicus HOM05D003177 ORTHO05D003481 2.0e-161 573.2 496 62.3
Glyma.12G214200 Glycine max HOM05D003177 ORTHO05D003481 2.9e-157 559.3 480 61.9
Lj4g0006066 Lotus japonicus HOM05D003177 ORTHO05D003481 3.3e-140 502.7 400 64.2
VMungo1080G1398 Vigna mungo HOM05D003177 ORTHO05D003481 1.2e-118 431.0 428 57.5
Phvul.005G091800 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 4.0e-114 416.0 494 51.2
Lj3g0020379 Lotus japonicus HOM05D003177 ORTHO05D003481 1.7e-112 410.6 464 47.6
Ca_18849_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 7.1e-111 405.2 441 47.6
Glyma.06G268800 Glycine max HOM05D003177 ORTHO05D003481 3.5e-110 402.9 418 47.6
Psat7g161600 Pisum sativum HOM05D003177 ORTHO05D003481 1.6e-107 394.0 469 45.8
TWI39G1173 Tripterygium wilfordii HOM05D003177 ORTHO05D003481 1.1e-106 391.3 489 45.0
TPR.G36746 Trifolium pratense HOM05D003177 ORTHO05D003481 4.0e-106 389.4 435 53.1
Dinv22304 Davidia involucrata HOM05D003177 ORTHO05D003481 5.3e-106 389.0 417 50.1
Medtr2g082940 Medicago truncatula HOM05D003177 ORTHO05D003481 9.0e-106 388.3 523 48.6
Gohir.D01G061200 Gossypium hirsutum HOM05D003177 ORTHO05D003481 6.4e-104 382.1 443 47.2
Gohir.A01G074600 Gossypium hirsutum HOM05D003177 ORTHO05D003481 1.9e-103 380.6 443 47.4
Gorai.002G082600 Gossypium raimondii HOM05D003177 ORTHO05D003481 1.9e-103 380.6 443 47.2
TPR.G25924 Trifolium pratense HOM05D003177 ORTHO05D003481 3.2e-103 379.8 499 43.1
CsaV3_3G022860 Cucumis sativus L. HOM05D003177 ORTHO05D003481 7.1e-103 378.6 464 44.8
CANSAT11G2707 Cannabis sativa HOM05D003177 ORTHO05D003481 9.3e-103 378.3 446 44.4
MD03G1211600 Malus domestica HOM05D003177 ORTHO05D003481 1.6e-102 377.5 467 44.5
Cfa020414 Carpinus fangiana HOM05D003177 ORTHO05D003481 4.6e-102 375.9 423 48.2
Phvul.003G295700 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 1.8e-101 374.0 417 46.0
MELO3C018128.2 Cucumis melo HOM05D003177 ORTHO05D003481 2.3e-101 373.6 464 44.2
Actinidia10706 Actinidia chinensis HOM05D003177 ORTHO05D003481 6.7e-101 372.1 449 45.9
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 6.7e-101 372.1 508 41.9
Sed0011296 Sechium edule HOM05D003177 ORTHO05D003481 8.7e-101 371.7 479 42.0
Sed0011648 Sechium edule HOM05D003177 ORTHO05D003481 1.9e-100 370.5 466 44.2
VMungo1127G0088 Vigna mungo HOM05D003177 ORTHO05D003481 3.3e-100 369.8 429 45.0
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea HOM05D003177 ORTHO05D003481 1.3e-99 367.9 480 42.3
Psat5g251840 Pisum sativum HOM05D003177 ORTHO05D003481 2.4e-98 363.6 524 45.4
MSTRG.14415 Avicennia marina HOM05D003177 ORTHO05D003481 7.6e-97 358.6 407 46.2
Medtr4g081220 Medicago truncatula HOM05D003177 ORTHO05D003481 8.4e-96 355.1 482 42.5
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 3.2e-95 353.2 412 43.7
FvH4_3g21820 Fragaria vesca HOM05D003177 ORTHO05D003481 7.1e-95 352.1 420 45.7
Oeu007628.1 Olea europaea HOM05D003177 ORTHO05D003481 9.3e-95 351.7 462 41.1
arahy.Tifrunner.gnm1.ann1.2TAV4H Arachis hypogaea HOM05D003177 ORTHO05D003481 2.1e-94 350.5 449 43.7
Prupe.4G202300 Prunus persica HOM05D003177 ORTHO05D003481 4.6e-94 349.4 467 42.8
TAR629G1976 Trochodendron aralioides HOM05D003177 ORTHO05D003481 3.9e-93 346.3 410 44.1
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 6.7e-93 345.5 484 43.6
Ca_01752_v3 Cicer arietinum L. HOM05D003177 ORTHO05D003481 1.5e-92 344.4 322 56.2
Thecc.07G052500 Theobroma cacao HOM05D003177 ORTHO05D003481 2.5e-92 343.6 462 43.3
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 3.3e-92 343.2 480 40.6
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 9.6e-92 341.7 494 41.5
Manes.03G122901 Manihot esculenta HOM05D003177 ORTHO05D003481 9.6e-92 341.7 345 51.0
Phvul.011G140050 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 2.8e-91 340.1 417 44.8
Lalb_Chr19g0134751 Lupinus albus HOM05D003177 ORTHO05D003481 4.8e-91 339.3 407 45.2
Duzib213G0670 Durio zibethinus HOM05D003177 ORTHO05D003481 2.4e-90 337.0 401 46.6
Nitab4.5_0000397g0040 Nicotiana tabacum HOM05D003177 ORTHO05D003481 2.4e-90 337.0 477 39.4
FvH4_7g08040 Fragaria vesca HOM05D003177 ORTHO05D003481 5.3e-90 335.9 479 42.4
Potri.001G417400 Populus trichocarpa HOM05D003177 ORTHO05D003481 5.3e-90 335.9 416 43.5
Duzib268G0600 Durio zibethinus HOM05D003177 ORTHO05D003481 6.9e-90 335.5 400 45.0
FAN03G0141 Fragaria x ananassa HOM05D003177 ORTHO05D003481 6.9e-90 335.5 470 42.1
FAN06G1056 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.2e-89 334.7 479 42.8
FAN01G1176 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.5e-89 334.3 459 43.1
RcHm_v2.0_Chr4g0410111 Rosa chinensis HOM05D003177 ORTHO05D003481 2.9e-88 330.1 440 45.2
vmacro11767 Vaccinium macrocarpon HOM05D003177 ORTHO05D003481 3.8e-88 329.7 444 42.6
FAN10G2257 Fragaria x ananassa HOM05D003177 ORTHO05D003481 6.5e-88 328.9 459 41.8
ClCG05G014770 Citrullus lanatus HOM05D003177 ORTHO05D003481 1.4e-87 327.8 481 39.5
Sopen07g032250 Solanum pennellii HOM05D003177 ORTHO05D003481 1.2e-86 324.7 435 41.1
Aqoxy4G02069 Aquilegia oxysepala HOM05D003177 ORTHO05D003481 6.1e-86 322.4 443 40.4
CiPaw.11G183800 Carya illinoinensis HOM05D003177 ORTHO05D003481 6.1e-86 322.4 324 50.6
Nn1g03661 Nelumbo nucifera HOM05D003177 ORTHO05D003481 7.9e-86 322.0 397 41.8
ATR0794G044 Amborella trichopoda HOM05D003177 ORTHO05D003481 1.3e-85 321.2 456 39.7
Migut.H01856 Erythranthe guttata HOM05D003177 ORTHO05D003481 2.3e-85 320.5 434 40.8
Potri.011G133100 Populus trichocarpa HOM05D003177 ORTHO05D003481 3.9e-85 319.7 446 41.7
THA.LOC104813041 Tarenaya hassleriana HOM05D003177 ORTHO05D003481 3.9e-85 319.7 416 43.5
PGR031G3084 Punica granatum HOM05D003177 ORTHO05D003481 1.1e-84 318.2 409 42.5
RcHm_v2.0_Chr5g0037541 Rosa chinensis HOM05D003177 ORTHO05D003481 1.5e-84 317.8 457 43.8
CAN.G337.147 Capsicum annuum HOM05D003177 ORTHO05D003481 5.3e-82 309.3 473 37.4
ECA246G0280 Erigeron canadensis HOM05D003177 ORTHO05D003481 6.9e-82 308.9 388 41.2
Eucgr.F03427 Eucalyptus grandis HOM05D003177 ORTHO05D003481 1.5e-81 307.8 354 46.0
PSO541G2106 Papaver somniferum HOM05D003177 ORTHO05D003481 2.0e-81 307.4 394 40.6
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 2.6e-81 307.0 445 38.9
AUR62020553 Chenopodium quinoa HOM05D003177 ORTHO05D003481 1.7e-80 304.3 413 40.4
HanXRQChr05g0159201 Helianthus annuus HOM05D003177 ORTHO05D003481 2.2e-80 303.9 472 37.3
Solyc07g064110.3 Solanum lycopersicum HOM05D003177 ORTHO05D003481 5.0e-80 302.8 410 41.0
FAN11G2546 Fragaria x ananassa HOM05D003177 ORTHO05D003481 6.5e-80 302.4 531 36.3
Peaxi162Scf01086g00156 Petunia axillaris HOM05D003177 ORTHO05D003481 2.5e-79 300.4 461 37.5
Sabra16G0283700 Salix brachista HOM05D003177 ORTHO05D003481 3.6e-78 296.6 439 39.2
CAN.G337.89 Capsicum annuum HOM05D003177 ORTHO05D003481 1.5e-76 291.2 448 36.8
Duzib213G0184 Durio zibethinus HOM05D003177 ORTHO05D003481 5.7e-76 289.3 374 43.6
A01p13180 Brassica napus HOM05D003177 ORTHO05D003481 7.4e-76 288.9 426 38.0
BraA01t01262Z Brassica rapa HOM05D003177 ORTHO05D003481 7.4e-76 288.9 426 38.0
BcaC04g21326 Brassica carinata HOM05D003177 ORTHO05D003481 3.7e-75 286.6 396 37.6
C09p33110 Brassica napus HOM05D003177 ORTHO05D003481 3.7e-75 286.6 396 37.6
Sp6g04150 Schrenkiella parvula HOM05D003177 ORTHO05D003481 6.3e-75 285.8 398 39.9
BcaNung02254 Brassica carinata HOM05D003177 ORTHO05D003481 1.4e-74 284.6 392 39.0
HPP92_004136 Vanilla planifolia HOM05D003177 ORTHO05D003481 1.4e-74 284.6 418 39.2
BcaC09g51192 Brassica carinata HOM05D003177 ORTHO05D003481 4.1e-74 283.1 426 37.6
C01p15880 Brassica napus HOM05D003177 ORTHO05D003481 4.1e-74 283.1 426 37.6
Nitab4.5_0009192g0010 Nicotiana tabacum HOM05D003177 ORTHO05D003481 6.9e-74 282.3 498 33.9
COL.COLO4_09572 Corchorus olitorius HOM05D003177 ORTHO05D003481 9.1e-74 282.0 405 40.0
BolC9t56146H Brassica oleracea HOM05D003177 ORTHO05D003481 2.6e-73 280.4 489 35.4
BolC1t01542H Brassica oleracea HOM05D003177 ORTHO05D003481 4.5e-73 279.6 397 38.8
Thhalv10024397m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 5.9e-73 279.3 384 39.3
Thhalv10028431m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 5.9e-73 279.3 481 35.3
Glyma.13G287400 Glycine max HOM05D003177 ORTHO05D003481 5.9e-73 279.3 220 67.7
BraA09t38176Z Brassica rapa HOM05D003177 ORTHO05D003481 1.3e-72 278.1 396 37.1
Sp7g20030 Schrenkiella parvula HOM05D003177 ORTHO05D003481 1.7e-72 277.7 392 38.3
PSO675G6436 Papaver somniferum HOM05D003177 ORTHO05D003481 2.2e-72 277.3 462 36.8
AUR62015646 Chenopodium quinoa HOM05D003177 ORTHO05D003481 3.2e-71 273.5 413 37.3
A09p26090 Brassica napus HOM05D003177 ORTHO05D003481 5.5e-71 272.7 488 34.6
FvH4_3g43110 Fragaria vesca HOM05D003177 ORTHO05D003481 7.2e-71 272.3 341 44.9
Carub.0006s3271 Capsella rubella HOM05D003177 ORTHO05D003481 1.2e-70 271.6 381 38.3
FvH4_3g43180 Fragaria vesca HOM05D003177 ORTHO05D003481 1.2e-70 271.6 341 44.9
Lsat_1_v5_gn_5_5721 Lactuca sativa HOM05D003177 ORTHO05D003481 1.2e-70 271.6 329 42.2
arahy.Tifrunner.gnm1.ann1.JSI4TH Arachis hypogaea HOM05D003177 ORTHO05D003481 1.6e-70 271.2 373 41.0
QL08p013313 Quercus lobata HOM05D003177 ORTHO05D003481 1.6e-70 271.2 335 44.2
BcaB01g01838 Brassica carinata HOM05D003177 ORTHO05D003481 2.7e-70 270.4 426 35.9
FAN21G1934 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.7e-70 270.4 341 44.6
CARHR228640 Cardamine hirsuta HOM05D003177 ORTHO05D003481 7.9e-70 268.9 387 38.0
Zm00001eb231370 Zea mays HOM05D003177 ORTHO05D003481 3.9e-69 266.5 395 34.4
Carub.0007s1949 Capsella rubella HOM05D003177 ORTHO05D003481 5.1e-69 266.2 467 34.7
arahy.Tifrunner.gnm1.ann1.2UU78P Arachis hypogaea HOM05D003177 ORTHO05D003481 2.0e-68 264.2 376 41.5
CARHR252740 Cardamine hirsuta HOM05D003177 ORTHO05D003481 4.4e-68 263.1 466 35.2
AT4G04790 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 2.8e-67 260.4 380 37.6
DCAR_008676 Daucus carota HOM05D003177 ORTHO05D003481 3.1e-66 256.9 330 40.3
EL10Ac4g07970 Beta vulgaris HOM05D003177 ORTHO05D003481 5.3e-66 256.1 365 40.0
Glyma.U031131 Glycine max HOM05D003177 ORTHO05D003481 5.0e-64 249.6 251 51.8
AL6G48280 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 6.5e-64 249.2 446 34.3
AT4G21880 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 1.6e-62 244.6 387 37.0
AL7G32020 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 2.1e-62 244.2 482 34.2
CsaV3_UNG228980 Cucumis sativus L. HOM05D003177 ORTHO05D003481 1.3e-59 235.0 306 43.1
Aa31LG9G9680 Aethionema arabicum HOM05D003177 ORTHO05D003481 6.3e-59 232.6 369 34.1
Ciclev10008319m.g Citrus clementina HOM05D003177 ORTHO05D003481 3.5e-57 226.9 291 43.3
Medtr7g007510 Medicago truncatula HOM05D003177 ORTHO05D003481 4.5e-57 226.5 413 37.0
Ciclev10008519m.g Citrus clementina HOM05D003177 ORTHO05D003481 5.0e-56 223.0 291 43.0
GSVIVG01014607001 Vitis vinifera HOM05D003177 ORTHO05D003481 8.3e-51 205.7 226 49.6
FvH4_3g42340 Fragaria vesca HOM05D003177 ORTHO05D003481 2.7e-49 200.7 356 35.7
FvH4_3g42560 Fragaria vesca HOM05D003177 ORTHO05D003481 2.7e-49 200.7 351 36.2
SHI50408 Sapria himalayana HOM05D003177 ORTHO05D003481 5.5e-47 193.0 307 36.2
Sc19g0005960 Simmondsia chinensis HOM05D003177 ORTHO05D003481 2.7e-46 190.7 263 41.8
Cpa.g.sc97.66 Carica papaya HOM05D003177 ORTHO05D003481 8.0e-46 189.1 227 44.9
Os02g0132600 Oryza sativa ssp. japonica HOM05D003177 ORTHO05D003481 8.8e-45 185.7 264 37.1
Medtr4g081210 Medicago truncatula HOM05D003177 ORTHO05D003481 2.8e-43 180.6 424 34.0
Medtr7g025580 Medicago truncatula HOM05D003177 ORTHO05D003481 3.7e-43 180.3 317 37.9
unitig_749.g13972 Utricularia gibba HOM05D003177 ORTHO05D003481 4.5e-41 173.3 316 33.9
CDE12G0466 Ceratophyllum demersum HOM05D003177 ORTHO05D003481 1.0e-40 172.2 205 42.4
Medtr7g025530 Medicago truncatula HOM05D003177 ORTHO05D003481 2.9e-40 170.6 231 43.7
PSO478G2228 Papaver somniferum HOM05D003177 ORTHO05D003481 5.0e-40 169.9 316 33.5
FAN28G1104 Fragaria x ananassa HOM05D003177 ORTHO05D003481 6.6e-40 169.5 400 31.5
FAN11G2904 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.3e-39 167.2 362 32.6
AL1G67350 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 3.6e-38 163.7 294 33.3
AL1G67370 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 2.3e-37 161.0 311 31.8
Hma1.2p1_1546F.1_g289980 Hydrangea macrophylla HOM05D003177 ORTHO05D003481 8.9e-37 159.1 198 40.4
FAN21G2694 Fragaria x ananassa HOM05D003177 ORTHO05D003481 5.7e-36 156.4 191 42.9
FAN11G0113 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.7e-35 153.7 374 30.7
Cpa.g.sc97.68 Carica papaya HOM05D003177 ORTHO05D003481 4.9e-35 153.3 143 54.5
CsaV3_UNG228990 Cucumis sativus L. HOM05D003177 ORTHO05D003481 4.9e-35 153.3 158 49.4
CSS0012105 Camellia sinensis var. sinensis HOM05D003177 ORTHO05D003481 1.1e-26 125.6 145 49.0
FAN11G0078 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.1e-26 125.6 186 41.4
QL08p013320 Quercus lobata HOM05D003177 ORTHO05D003481 2.4e-26 124.4 120 52.5
Glyma.U031231 Glycine max HOM05D003177 ORTHO05D003481 1.6e-25 121.7 136 41.2
Glyma.12G135400 Glycine max HOM05D003177 ORTHO05D003481 2.3e-24 117.9 103 54.4
Sc19g0005940 Simmondsia chinensis HOM05D003177 ORTHO05D003481 1.1e-23 115.5 110 53.6
BcaC09g51195 Brassica carinata HOM05D003177 ORTHO05D003481 4.3e-23 113.6 224 30.8
Lju3590A0T11 Lonicera japonica HOM05D003177 ORTHO05D003481 4.3e-23 113.6 192 38.5
SEGI_03301 Sequoiadendron giganteum HOM05D003177 ORTHO05D003481 1.8e-21 108.2 171 31.6
Nitab4.5_0000743g0080 Nicotiana tabacum HOM05D003177 ORTHO05D003481 4.4e-20 103.6 163 33.1
FAN16G1316 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.1e-18 99.0 150 36.0
Medtr4g133410 Medicago truncatula HOM05D003177 ORTHO05D003481 7.1e-18 96.3 147 38.8
Medtr8g070020 Medicago truncatula HOM05D003177 ORTHO05D003481 1.7e-16 91.7 146 37.7
PGSC0003DMG400019225 Solanum tuberosum HOM05D003177 ORTHO05D003481 2.3e-16 91.3 91 46.2
FvH4_3g41772 Fragaria vesca HOM05D003177 ORTHO05D003481 2.1e-14 84.7 98 39.8
Actinidia35317 Actinidia chinensis HOM05D003177 ORTHO05D003481 4.7e-14 83.6 126 40.5
Lj1A863T65 Lonicera japonica HOM05D003177 ORTHO05D003481 1.8e-13 81.6 77 54.5
unitig_26.g9968 Utricularia gibba HOM05D003177 ORTHO05D003481 3.7e-11 73.9 106 39.6
CDE12G0546 Ceratophyllum demersum HOM05D003177 ORTHO05D003481 2.4e-10 71.2 120 35.8
Medtr5g034890 Medicago truncatula HOM05D003177 ORTHO05D003481 4.6e-09 67.0 82 43.9


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