Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.L57236 Arachis hypogaea HOM05D007085 ORTHO05D008828 0.0e+00 1141.7 720 100.0
arahy.Tifrunner.gnm1.ann1.10LGU9 Arachis hypogaea HOM05D007085 ORTHO05D008828 3.6e-188 662.5 525 86.5
TPR.G29685 Trifolium pratense HOM05D007085 ORTHO05D008828 1.9e-72 278.1 360 57.2
Medtr2g072170 Medicago truncatula HOM05D007085 ORTHO05D008828 9.8e-69 265.8 348 62.4
Psat1g009200 Pisum sativum HOM05D007085 ORTHO05D008828 4.6e-66 256.9 345 63.5
Lj3g0005838 Lotus japonicus HOM05D007085 ORTHO05D008828 2.9e-52 211.1 206 57.3
DCAR_021048 Daucus carota HOM05D007085 ORTHO05D008828 8.1e-47 193.0 354 47.2
Glyma.15G245700 Glycine max HOM05D007085 ORTHO05D008828 1.2e-42 179.1 207 48.3
Haze_08476 Corylus avellana HOM05D007085 ORTHO05D008828 2.1e-42 178.3 176 49.4
Cfa019473 Carpinus fangiana HOM05D007085 ORTHO05D008828 2.7e-42 177.9 176 50.0
PGR031G3190 Punica granatum HOM05D007085 ORTHO05D008828 1.0e-41 176.0 349 45.8
Phvul.002G044000 Phaseolus vulgaris HOM05D007085 ORTHO05D008828 2.3e-41 174.9 174 52.3
VMungo1080G1467 Vigna mungo HOM05D007085 ORTHO05D008828 5.1e-41 173.7 175 53.1
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 3.3e-40 171.0 129 78.3
QL04p068992 Quercus lobata HOM05D007085 ORTHO05D008828 4.3e-40 170.6 212 42.9
arahy.Tifrunner.gnm1.ann1.GQ8ZCN Arachis hypogaea HOM05D002890 ORTHO05D009847 4.0e-38 164.1 158 63.9
Manes.01G152600 Manihot esculenta HOM05D007085 ORTHO05D008828 1.3e-36 159.1 168 44.6
Dinv13328 Davidia involucrata HOM05D007085 ORTHO05D008828 1.7e-36 158.7 165 46.7
Actinidia03646 Actinidia chinensis HOM05D007085 ORTHO05D008828 6.4e-36 156.8 168 47.0
BcaB06g25373 Brassica carinata HOM05D007085 ORTHO05D008828 1.9e-35 155.2 204 40.2
AT3G14580 Arabidopsis thaliana HOM05D007085 ORTHO05D008828 3.2e-35 154.5 170 43.5
CANSAT56G2932 Cannabis sativa HOM05D007085 ORTHO05D008828 3.2e-35 154.5 174 43.1
AL3G26910 Arabidopsis lyrata HOM05D007085 ORTHO05D008828 4.2e-35 154.1 170 43.5
CSS0001065 Camellia sinensis var. sinensis HOM05D007085 ORTHO05D008828 5.4e-35 153.7 165 46.1
Hma1.2p1_0587F.1_g184339 Hydrangea macrophylla HOM05D007085 ORTHO05D008828 5.4e-35 153.7 165 45.5
Hma1.2p1_0587F.1_g184370 Hydrangea macrophylla HOM05D007085 ORTHO05D008828 5.4e-35 153.7 165 45.5
CiPaw.12G046300 Carya illinoinensis HOM05D007085 ORTHO05D008828 7.1e-35 153.3 191 41.4
Migut.M00624 Erythranthe guttata HOM05D007085 ORTHO05D008828 7.1e-35 153.3 336 47.6
SalBow8G4060 Salvia bowleyana HOM05D007085 ORTHO05D008828 7.1e-35 153.3 199 44.7
Lj8P143T18 Lonicera japonica HOM05D007085 ORTHO05D008828 9.3e-35 152.9 165 45.5
Peaxi162Scf00573g00042 Petunia axillaris HOM05D007085 ORTHO05D008828 1.2e-34 152.5 165 45.5
Solyc10g007520.3 Solanum lycopersicum HOM05D007085 ORTHO05D008828 1.6e-34 152.1 167 43.7
CARHR089540 Cardamine hirsuta HOM05D007085 ORTHO05D008828 2.7e-34 151.4 170 42.9
Prupe.4G152100 Prunus persica HOM05D007085 ORTHO05D008828 3.5e-34 151.0 168 45.8
Cpa.g.sc2050.1 Carica papaya HOM05D007085 ORTHO05D008828 4.6e-34 150.6 169 45.6
FvH4_3g16970 Fragaria vesca HOM05D007085 ORTHO05D008828 4.6e-34 150.6 168 45.8
FAN11G1303 Fragaria x ananassa HOM05D007085 ORTHO05D008828 4.6e-34 150.6 168 45.8
FAN16G1935 Fragaria x ananassa HOM05D007085 ORTHO05D008828 4.6e-34 150.6 168 45.8
Thhalv10020856m.g Eutrema salsugineum HOM05D007085 ORTHO05D008828 6.0e-34 150.2 172 43.0
TAR627G0225 Trochodendron aralioides HOM05D007085 ORTHO05D008828 7.9e-34 149.8 165 43.6
Sopen10g003460 Solanum pennellii HOM05D007085 ORTHO05D008828 1.0e-33 149.4 167 43.1
ClCG11G016990 Citrullus lanatus HOM05D007085 ORTHO05D008828 1.3e-33 149.1 173 42.2
MD11G1276100 Malus domestica HOM05D007085 ORTHO05D008828 1.3e-33 149.1 168 45.2
Aqoxy2G00336 Aquilegia oxysepala HOM05D007085 ORTHO05D008828 2.3e-33 148.3 170 45.3
arahy.Tifrunner.gnm1.ann1.R7MN0P Arachis hypogaea HOM05D010382 ORTHO05D009847 2.3e-33 148.3 83 89.2
BraA05t22296Z Brassica rapa HOM05D007085 ORTHO05D008828 2.3e-33 148.3 171 41.5
Carub.0003s1428 Capsella rubella HOM05D007085 ORTHO05D008828 2.3e-33 148.3 170 41.8
MELO3C025593.2 Cucumis melo HOM05D007085 ORTHO05D008828 2.3e-33 148.3 211 37.0
PGSC0003DMG400044445 Solanum tuberosum HOM05D007085 ORTHO05D008828 3.0e-33 147.9 167 42.5
PGSC0003DMG402021252 Solanum tuberosum HOM05D007085 ORTHO05D008828 3.0e-33 147.9 167 42.5
TWI60G0193 Tripterygium wilfordii HOM05D007085 ORTHO05D008828 3.0e-33 147.9 168 44.0
Aa31LG8G1790 Aethionema arabicum HOM05D000230 ORTHO05D000176 3.9e-33 147.5 171 41.5
CsaV3_4G032620 Cucumis sativus L. HOM05D007085 ORTHO05D008828 3.9e-33 147.5 211 36.5
A05p34840 Brassica napus HOM05D007085 ORTHO05D008828 5.1e-33 147.1 171 43.3
BolC5t33948H Brassica oleracea HOM05D007085 ORTHO05D008828 6.7e-33 146.7 171 41.5
Sed0002576 Sechium edule HOM05D007085 ORTHO05D008828 6.7e-33 146.7 173 42.2
Sc03g0010930 Simmondsia chinensis HOM05D007085 ORTHO05D008828 6.7e-33 146.7 170 45.9
Ciclev10020422m.g Citrus clementina HOM05D007085 ORTHO05D008828 1.1e-32 146.0 168 44.0
Potri.001G379500 Populus trichocarpa HOM05D007085 ORTHO05D008828 1.5e-32 145.6 168 42.9
Sabra16G0250000 Salix brachista HOM05D007085 ORTHO05D008828 1.5e-32 145.6 168 42.9
Eucgr.F03214 Eucalyptus grandis HOM05D007085 ORTHO05D008828 2.5e-32 144.8 170 44.1
Sp3g12850 Schrenkiella parvula HOM05D007085 ORTHO05D008828 2.5e-32 144.8 170 40.6
SGA_v2.0_scaffold34G13702 Striga asiatica HOM05D007085 ORTHO05D008828 2.5e-32 144.8 238 38.7
Nn3g20730 Nelumbo nucifera HOM05D007085 ORTHO05D008828 3.3e-32 144.4 226 38.9
CAN.G4458.1 Capsicum annuum HOM05D007085 ORTHO05D008828 4.3e-32 144.1 166 46.4
CAN.G904.26 Capsicum annuum HOM05D007085 ORTHO05D008828 4.3e-32 144.1 166 46.4
CAN.G904.38 Capsicum annuum HOM05D007085 ORTHO05D008828 4.3e-32 144.1 166 46.4
PSO063G4137 Papaver somniferum HOM05D007085 ORTHO05D008828 5.6e-32 143.7 166 46.4
BcaC05g29059 Brassica carinata HOM05D007085 ORTHO05D008828 7.4e-32 143.3 205 38.5
C05p52690 Brassica napus HOM05D007085 ORTHO05D008828 7.4e-32 143.3 205 38.5
Oeu009876.3 Olea europaea HOM05D007085 ORTHO05D008828 1.6e-31 142.1 167 44.3
Cc05_g10440 Coffea canephora HOM05D007085 ORTHO05D008828 2.1e-31 141.7 165 43.6
RcHm_v2.0_Chr5g0028281 Rosa chinensis HOM05D007085 ORTHO05D008828 2.1e-31 141.7 164 44.5
Ah.04g163870 Amaranthus hybridus HOM05D007085 ORTHO05D008828 1.1e-30 139.4 166 46.4
CDE04G0400 Ceratophyllum demersum HOM05D007085 ORTHO05D008828 1.1e-30 139.4 173 42.8
SHI27645 Sapria himalayana HOM05D007085 ORTHO05D008828 1.1e-30 139.4 164 42.1
arahy.Tifrunner.gnm1.ann1.V8FBSL Arachis hypogaea HOM05D010382 ORTHO05D009847 1.4e-30 139.0 79 87.3
RhsimUnG0205600 Rhododendron simsii HOM05D007085 ORTHO05D008828 1.8e-30 138.7 165 41.8
ECA240G0168 Erigeron canadensis HOM05D007085 ORTHO05D008828 5.3e-30 137.1 165 41.2
Lsat_1_v5_gn_9_101401 Lactuca sativa HOM05D007085 ORTHO05D008828 5.3e-30 137.1 164 42.1
vmacro09426 Vaccinium macrocarpon HOM05D007085 ORTHO05D008828 5.3e-30 137.1 228 35.1
Oeu006136.1 Olea europaea HOM05D007085 ORTHO05D008828 2.6e-29 134.8 272 51.8
Os04g0618050 Oryza sativa ssp. japonica HOM05D007085 ORTHO05D008828 2.6e-29 134.8 186 39.8
HPP92_011319 Vanilla planifolia HOM05D007085 ORTHO05D008828 5.8e-29 133.7 176 41.5
EL10Ac4g08466 Beta vulgaris HOM05D007085 ORTHO05D008828 1.7e-28 132.1 166 43.4
ATR0605G112 Amborella trichopoda HOM05D007085 ORTHO05D008828 2.2e-28 131.7 167 43.7
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 4.9e-28 130.6 96 72.9
Thecc.07G142300 Theobroma cacao HOM05D007085 ORTHO05D008828 6.5e-28 130.2 222 35.6
Zm00001eb431040 Zea mays HOM05D007085 ORTHO05D008828 6.5e-28 130.2 186 39.2
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 2.5e-27 128.3 106 72.6
Duzib268G0775 Durio zibethinus HOM05D007085 ORTHO05D008828 9.3e-27 126.3 190 37.9
Gorai.007G332700 Gossypium raimondii HOM05D007085 ORTHO05D008828 4.6e-26 124.0 154 40.9
Gohir.D11G302200 Gossypium hirsutum HOM05D007085 ORTHO05D008828 6.0e-26 123.6 154 40.9
Gorai.007G334700 Gossypium raimondii HOM05D007085 ORTHO05D008828 7.9e-26 123.2 156 40.4
MBI07_g26363_MAGBIO Magnolia biondii HOM05D007085 ORTHO05D008828 2.3e-25 121.7 158 39.2
Gohir.A11G290600 Gossypium hirsutum HOM05D007085 ORTHO05D008828 3.0e-25 121.3 154 39.6
Gorai.007G334000 Gossypium raimondii HOM05D007085 ORTHO05D008828 3.0e-25 121.3 157 40.8
Gorai.007G334300 Gossypium raimondii HOM05D007085 ORTHO05D008828 6.7e-25 120.2 154 40.9
COL.COLO4_17436 Corchorus olitorius HOM05D007085 ORTHO05D008828 8.7e-25 119.8 207 35.7
Nitab4.5_0000923g0040 Nicotiana tabacum HOM05D000021 ORTHO05D008828 8.7e-25 119.8 91 59.3
arahy.Tifrunner.gnm1.ann1.56JAE5 Arachis hypogaea HOM05D005185 ORTHO05D006075 3.3e-24 117.9 81 77.8
AUR62019703 Chenopodium quinoa HOM05D007085 ORTHO05D008828 2.1e-23 115.2 139 44.6
arahy.Tifrunner.gnm1.ann1.UB6GPN Arachis hypogaea HOM05D010382 ORTHO05D009847 6.2e-23 113.6 72 84.7
AUR62037984 Chenopodium quinoa HOM05D007085 ORTHO05D008828 4.0e-22 110.9 141 44.7
Lalb_Chr25g0285531 Lupinus albus HOM05D007085 ORTHO05D008828 1.2e-21 109.4 108 51.9
Actinidia00869 Actinidia chinensis HOM05D007085 ORTHO05D008828 2.6e-21 108.2 138 42.0
THA.LOC104822596 Tarenaya hassleriana HOM05D007085 ORTHO05D008828 3.4e-21 107.8 152 35.5
arahy.Tifrunner.gnm1.ann1.74EJA4 Arachis hypogaea HOM05D001098 ORTHO05D002527 1.3e-20 105.9 98 62.2
arahy.Tifrunner.gnm1.ann1.BJCX7Z Arachis hypogaea HOM05D010382 ORTHO05D005864 1.3e-20 105.9 136 55.9
arahy.Tifrunner.gnm1.ann1.9HI94T Arachis hypogaea HOM05D010382 ORTHO05D009749 5.0e-20 104.0 71 78.9
arahy.Tifrunner.gnm1.ann1.H2MGKB Arachis hypogaea HOM05D010382 ORTHO05D005864 8.4e-20 103.2 147 51.0
arahy.Tifrunner.gnm1.ann1.VEWU5V Arachis hypogaea HOM05D001733 ORTHO05D001882 8.4e-20 103.2 87 67.8
arahy.Tifrunner.gnm1.ann1.8L89DK Arachis hypogaea HOM05D001458 ORTHO05D008462 7.1e-19 100.1 92 62.0
Nitab4.5_0009310g0040 Nicotiana tabacum HOM05D007085 ORTHO05D008828 7.1e-19 100.1 127 41.7
BcaC05g29057 Brassica carinata HOM05D007085 ORTHO05D008828 9.3e-19 99.8 107 45.8
arahy.Tifrunner.gnm1.ann1.EWZ1G2 Arachis hypogaea HOM05D010382 ORTHO05D005864 4.6e-18 97.4 130 50.8
arahy.Tifrunner.gnm1.ann1.R6MMNN Arachis hypogaea HOM05D010382 ORTHO05D007338 8.7e-17 93.2 82 64.6
arahy.Tifrunner.gnm1.ann1.GLEK9Y Arachis hypogaea HOM05D010382 ORTHO05D009847 1.1e-16 92.8 81 63.0
arahy.Tifrunner.gnm1.ann1.QUE6U2 Arachis hypogaea HOM05D000225 ORTHO05D009781 1.9e-16 92.0 91 59.3
Ca_03402_v3 Cicer arietinum L. HOM05D007085 ORTHO05D008828 3.3e-16 91.3 239 59.8
arahy.Tifrunner.gnm1.ann1.N8MLZ0 Arachis hypogaea HOM05D002722 ORTHO05D003076 5.7e-16 90.5 71 70.4
arahy.Tifrunner.gnm1.ann1.G2DUAD Arachis hypogaea HOM05D010382 ORTHO05D007338 3.7e-15 87.8 100 52.0
arahy.Tifrunner.gnm1.ann1.411P2H Arachis hypogaea HOM05D001273 ORTHO05D000023 6.3e-15 87.0 152 45.4
arahy.Tifrunner.gnm1.ann1.FKP9D6 Arachis hypogaea HOM05D010382 ORTHO05D007338 1.8e-14 85.5 65 67.7
arahy.Tifrunner.gnm1.ann1.29RRUL Arachis hypogaea HOM05D010382 ORTHO05D005864 4.1e-14 84.3 89 61.8
arahy.Tifrunner.gnm1.ann1.8M8Z93 Arachis hypogaea HOM05D010382 ORTHO05D007338 5.3e-14 84.0 73 63.0
Sc03g0010950 Simmondsia chinensis HOM05D007085 ORTHO05D008828 6.9e-14 83.6 60 60.0
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 3.4e-13 81.3 78 65.4
arahy.Tifrunner.gnm1.ann1.UV30T1 Arachis hypogaea HOM05D010382 ORTHO05D003966 3.4e-13 81.3 68 66.2
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.0e-12 79.7 133 47.4
arahy.Tifrunner.gnm1.ann1.U280DN Arachis hypogaea HOM05D002418 ORTHO05D002572 1.7e-12 79.0 39 92.3
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 2.2e-12 78.6 75 58.7
arahy.Tifrunner.gnm1.ann1.H5XG83 Arachis hypogaea HOM05D010382 ORTHO05D009847 3.8e-12 77.8 55 76.4
arahy.Tifrunner.gnm1.ann1.T6B6L0 Arachis hypogaea HOM05D002986 ORTHO05D003966 3.8e-12 77.8 67 65.7
arahy.Tifrunner.gnm1.ann1.F69C65 Arachis hypogaea HOM05D002418 ORTHO05D002572 8.5e-12 76.6 34 97.1
arahy.Tifrunner.gnm1.ann1.MP6I0Q Arachis hypogaea HOM05D010382 ORTHO05D005864 1.1e-11 76.3 61 75.4
HanXRQChr03g0074311 Helianthus annuus HOM05D007085 ORTHO05D008828 3.2e-11 74.7 56 58.9
SEGI_39798 Sequoiadendron giganteum HOM05D007085 ORTHO05D008828 3.6e-10 71.2 132 31.1
Lalb_Chr20g0109031 Lupinus albus HOM05D002418 ORTHO05D002572 1.0e-09 69.7 36 86.1
Lalb_Chr25g0285501 Lupinus albus HOM05D002418 ORTHO05D002572 1.8e-09 68.9 37 83.8
arahy.Tifrunner.gnm1.ann1.86F40W Arachis hypogaea HOM05D005185 ORTHO05D006075 3.9e-09 67.8 108 45.4
Gohir.D11G302000 Gossypium hirsutum HOM05D007085 ORTHO05D008828 3.9e-09 67.8 112 37.5
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 5.1e-09 67.4 121 46.3
Phvul.005G062800 Phaseolus vulgaris HOM05D002418 ORTHO05D002572 2.5e-08 65.1 38 78.9
TPR.G6847 Trifolium pratense HOM05D002418 ORTHO05D002572 2.5e-08 65.1 41 75.6
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 4.3e-08 64.3 128 47.7
Oeu006142.1 Olea europaea HOM05D007085 ORTHO05D008828 4.3e-08 64.3 69 42.0
arahy.Tifrunner.gnm1.ann1.5875FQ Arachis hypogaea HOM05D005570 ORTHO05D005864 7.4e-08 63.5 128 45.3
arahy.Tifrunner.gnm1.ann1.093KP0 Arachis hypogaea HOM05D002360 ORTHO05D006297 9.7e-08 63.2 138 43.5
arahy.Tifrunner.gnm1.ann1.FP2ZMI Arachis hypogaea HOM05D010382 ORTHO05D009847 9.7e-08 63.2 50 66.0
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 9.7e-08 63.2 57 68.4
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 2.8e-07 61.6 117 43.6
VMungo1080G0252 Vigna mungo HOM05D002418 ORTHO05D002572 4.8e-07 60.8 37 78.4
arahy.Tifrunner.gnm1.ann1.JXA9IA Arachis hypogaea HOM05D005570 ORTHO05D005864 8.2e-07 60.1 128 44.5
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 1.1e-06 59.7 68 52.9
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 1.1e-06 59.7 128 44.5
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 1.8e-06 58.9 56 60.7
arahy.Tifrunner.gnm1.ann1.689Y8G Arachis hypogaea HOM05D005570 ORTHO05D005864 3.1e-06 58.2 40 85.0
arahy.Tifrunner.gnm1.ann1.TDW0BY Arachis hypogaea HOM05D005185 ORTHO05D006075 3.1e-06 58.2 160 36.2
arahy.Tifrunner.gnm1.ann1.NQ2DUC Arachis hypogaea HOM05D005570 ORTHO05D005864 4.1e-06 57.8 122 41.8
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 4.1e-06 57.8 56 60.7
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 5.3e-06 57.4 128 44.5
arahy.Tifrunner.gnm1.ann1.RXW997 Arachis hypogaea HOM05D003997 ORTHO05D002698 5.3e-06 57.4 82 51.2
Medtr2g072210 Medicago truncatula HOM05D002418 ORTHO05D002572 6.9e-06 57.0 36 69.4
Sopen11g030860 Solanum pennellii HOM05D002453 ORTHO05D002107 6.9e-06 57.0 146 29.5
BraA05t19732Z Brassica rapa HOM05D007559 ORTHO05D009642 9.1e-06 56.6 166 27.1


User provided reference genes

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