Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 2.2e-290 1001.5 484 100.0
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 8.1e-285 983.0 485 98.6
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 1.4e-228 796.2 481 79.8
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 1.1e-225 786.6 481 78.8
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 2.3e-223 778.9 481 78.4
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 2.3e-223 778.9 482 79.0
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 1.2e-222 776.5 481 76.3
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 8.3e-221 770.4 480 76.7
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 3.1e-220 768.5 481 77.5
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.3e-218 763.1 481 76.7
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 5.0e-218 761.1 480 77.1
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 4.2e-217 758.1 481 76.1
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 9.8e-214 746.9 478 75.9
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 9.8e-206 720.3 448 77.2
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 1.1e-204 716.8 457 75.5
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 1.3e-202 709.9 480 72.1
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 1.1e-199 700.3 479 72.2
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 1.2e-198 696.8 484 69.4
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 3.7e-197 691.8 481 67.8
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 4.9e-197 691.4 482 68.7
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 8.3e-197 690.6 480 67.5
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 8.6e-194 680.6 478 67.8
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.1e-193 680.2 482 67.4
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 2.5e-193 679.1 482 67.2
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 3.3e-193 678.7 482 68.0
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 2.1e-192 676.0 456 69.7
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 2.3e-191 672.5 481 66.5
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 5.2e-191 671.4 417 74.1
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 6.8e-191 671.0 479 66.8
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.5e-190 669.8 493 66.1
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 2.0e-190 669.5 453 68.2
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 2.6e-190 669.1 490 66.5
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 9.9e-190 667.2 472 67.2
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 2.9e-189 665.6 397 76.1
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 6.4e-189 664.5 416 72.8
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 1.4e-188 663.3 481 66.5
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 4.1e-188 661.8 402 74.4
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 3.5e-187 658.7 471 66.5
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 4.6e-187 658.3 480 65.0
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 1.3e-186 656.8 480 64.8
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 1.7e-186 656.4 398 75.1
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 3.9e-186 655.2 398 73.4
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 1.1e-185 653.7 422 70.6
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.5e-185 653.3 427 69.8
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 1.5e-185 653.3 478 65.9
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 5.6e-185 651.4 422 70.6
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 4.7e-184 648.3 457 67.0
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 4.7e-184 648.3 457 66.5
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 1.1e-183 647.1 457 66.7
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 4.0e-183 645.2 431 70.1
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 5.2e-183 644.8 470 64.3
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 6.8e-183 644.4 486 63.8
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 1.2e-182 643.7 451 65.4
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 1.2e-182 643.7 480 64.6
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.5e-182 643.3 401 73.1
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 1.5e-182 643.3 413 70.9
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 3.4e-182 642.1 457 65.2
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 5.8e-182 641.3 449 67.5
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 1.9e-180 636.3 397 72.8
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 9.2e-180 634.0 464 64.0
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 6.0e-179 631.3 482 62.2
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 1.3e-178 630.2 482 63.1
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 3.0e-178 629.0 460 64.8
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.8e-176 622.5 484 61.6
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 8.1e-176 620.9 484 62.8
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 9.0e-175 617.5 486 63.6
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 2.6e-174 615.9 450 63.1
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 5.8e-174 614.8 484 61.4
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 2.2e-173 612.8 489 61.8
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 2.2e-173 612.8 441 64.2
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 2.9e-173 612.5 490 62.2
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 3.8e-173 612.1 413 68.0
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 1.9e-172 609.8 485 61.6
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 1.9e-172 609.8 441 65.8
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 7.1e-172 607.8 484 61.8
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 1.2e-171 607.1 484 61.0
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 1.6e-171 606.7 486 61.9
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 2.1e-171 606.3 444 64.2
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 4.6e-171 605.1 393 71.5
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 7.8e-171 604.4 486 61.7
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.3e-170 603.6 469 60.8
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 3.0e-170 602.4 486 61.5
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 3.0e-170 602.4 486 61.5
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.0e-170 602.4 472 61.0
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 1.1e-169 600.5 414 66.7
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 6.2e-168 594.7 387 69.5
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.4e-167 593.6 400 65.8
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 4.0e-167 592.0 423 64.5
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 3.4e-166 589.0 385 67.8
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 9.9e-166 587.4 425 66.6
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 2.2e-165 586.3 357 73.9
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 3.5e-163 578.9 428 65.0
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 4.6e-163 578.6 465 59.8
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 1.0e-162 577.4 413 62.5
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 3.0e-162 575.9 355 74.1
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 6.7e-162 574.7 488 59.2
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.6e-158 562.8 407 63.1
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 7.1e-156 554.7 415 62.4
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 4.6e-155 552.0 356 70.5
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 5.3e-151 538.5 373 68.9
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 1.0e-149 534.3 401 64.8
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 2.5e-148 529.6 353 65.4
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 4.2e-148 528.9 389 65.6
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 1.8e-143 513.5 372 66.7
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 4.1e-143 512.3 394 60.2
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 6.3e-128 461.8 395 52.7
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 2.6e-126 456.4 408 52.5
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 2.7e-123 446.4 439 52.2
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 3.9e-122 442.6 406 52.7
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.7e-120 437.2 404 51.5
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 2.5e-116 423.3 254 78.3
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 6.7e-114 415.2 435 47.6
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 2.6e-113 413.3 251 75.7
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 1.4e-98 364.4 267 67.4
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.7e-86 323.6 263 56.7
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 7.5e-73 278.9 185 59.5
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 4.3e-68 263.1 253 52.6
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 1.4e-66 258.1 195 64.1
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 3.1e-66 256.9 160 69.4
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 2.9e-64 250.4 240 55.4
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.1e-59 234.2 158 66.5
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 3.6e-51 206.8 129 67.4
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 4.3e-44 183.3 129 60.5
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 8.2e-35 152.5 458 27.9
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 3.2e-31 140.6 375 29.6
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 4.8e-27 126.7 84 69.0
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 2.1e-22 111.3 431 26.9
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 8.8e-21 105.9 346 26.9
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 2.6e-12 77.8 54 72.2
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 5.7e-12 76.6 80 58.8
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 3.1e-10 70.9 91 39.6
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 5.3e-10 70.1 55 54.5
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.0e-08 65.9 168 30.4
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 5.0e-08 63.5 61 52.5
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 5.0e-08 63.5 61 52.5


User provided reference genes

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