Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.I8NXM6 Arachis hypogaea HOM05D030090 ORTHO05D000627 5.2e-70 268.1 188 100.0
arahy.Tifrunner.gnm1.ann1.JIT9FN Arachis hypogaea HOM05D001250 ORTHO05D000627 3.3e-32 142.5 188 67.6
arahy.Tifrunner.gnm1.ann1.6W08F7 Arachis hypogaea HOM05D030090 ORTHO05D000627 1.2e-29 134.0 166 66.3
arahy.Tifrunner.gnm1.ann1.1DC3U9 Arachis hypogaea HOM05D030090 ORTHO05D000627 5.8e-29 131.7 180 63.3
arahy.Tifrunner.gnm1.ann1.JIQY4S Arachis hypogaea HOM05D030090 ORTHO05D000627 5.6e-24 115.2 180 46.7
arahy.Tifrunner.gnm1.ann1.9RWZ5V Arachis hypogaea HOM05D001250 ORTHO05D000627 4.0e-22 109.0 79 73.4
arahy.Tifrunner.gnm1.ann1.BPB7X4 Arachis hypogaea HOM05D001250 ORTHO05D000627 4.6e-18 95.5 185 42.7
Lalb_Chr05g0217241 Lupinus albus HOM05D001250 ORTHO05D000627 9.9e-13 77.8 74 59.5
Rhsim12G0050500 Rhododendron simsii HOM05D001250 ORTHO05D000627 2.9e-12 76.3 67 64.2
Lj2g0019425 Lotus japonicus HOM05D001250 ORTHO05D000627 4.9e-12 75.5 68 57.4
Psat2g113200 Pisum sativum HOM05D001250 ORTHO05D000627 4.9e-12 75.5 68 61.8
TPR.G13949 Trifolium pratense HOM05D001250 ORTHO05D000627 4.9e-12 75.5 68 61.8
Dinv24910 Davidia involucrata HOM05D001250 ORTHO05D000627 2.4e-11 73.2 67 61.2
TWI36G0426 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 2.4e-11 73.2 74 58.1
TWI75G0118 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 4.2e-11 72.4 68 55.9
TWI75G0561 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 4.2e-11 72.4 68 55.9
TWI75G1804 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 4.2e-11 72.4 68 55.9
CSS0048728 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 9.3e-11 71.2 67 58.2
Haze_12128 Corylus avellana HOM05D001250 ORTHO05D000627 9.3e-11 71.2 67 59.7
FAN07G0319 Fragaria x ananassa HOM05D001250 ORTHO05D000627 9.3e-11 71.2 86 51.2
CiPaw.05G145900 Carya illinoinensis HOM05D001250 ORTHO05D000627 1.2e-10 70.9 67 59.7
FvH4_4g35130 Fragaria vesca HOM05D001250 ORTHO05D000627 2.1e-10 70.1 67 58.2
FAN12G1641 Fragaria x ananassa HOM05D001250 ORTHO05D000627 2.1e-10 70.1 67 58.2
FAN17G0792 Fragaria x ananassa HOM05D001250 ORTHO05D000627 2.1e-10 70.1 88 53.4
FAN22G0402 Fragaria x ananassa HOM05D001250 ORTHO05D000627 2.1e-10 70.1 67 58.2
MD16G1085400 Malus domestica HOM05D001250 ORTHO05D000627 2.7e-10 69.7 67 58.2
Prupe.1G260700 Prunus persica HOM05D001250 ORTHO05D000627 2.7e-10 69.7 67 59.7
Glyma.02G029400 Glycine max HOM05D001250 ORTHO05D000627 4.6e-10 68.9 180 33.9
GSVIVG01020155001 Vitis vinifera HOM05D001250 ORTHO05D000627 4.6e-10 68.9 65 60.0
Lj3P1048T15 Lonicera japonica HOM05D001250 ORTHO05D000627 6.0e-10 68.6 68 58.8
Cpa.g.sc5.339 Carica papaya HOM05D001250 ORTHO05D000627 7.9e-10 68.2 68 55.9
Lj6P800T20 Lonicera japonica HOM05D001250 ORTHO05D000627 1.0e-09 67.8 68 55.9
Glyma.01G036600 Glycine max HOM05D001250 ORTHO05D000627 1.8e-09 67.0 180 34.4
MD13G1086000 Malus domestica HOM05D001250 ORTHO05D000627 3.0e-09 66.2 67 56.7
Phvul.002G075900 Phaseolus vulgaris HOM05D001250 ORTHO05D000627 3.9e-09 65.9 180 37.2
TAR374G0543 Trochodendron aralioides HOM05D001250 ORTHO05D000627 3.9e-09 65.9 67 55.2
Ciclev10032466m.g Citrus clementina HOM05D001250 ORTHO05D000627 5.1e-09 65.5 86 48.8
TWI18G0415 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 5.1e-09 65.5 71 52.1
CSS0019313 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 6.7e-09 65.1 69 53.6
Sc11g0001400 Simmondsia chinensis HOM05D001250 ORTHO05D000627 6.7e-09 65.1 74 48.6
MSTRG.629 Avicennia marina HOM05D001250 ORTHO05D000627 8.7e-09 64.7 67 52.2
QL03p067113 Quercus lobata HOM05D001250 ORTHO05D000627 8.7e-09 64.7 68 55.9
CSS0002480 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 1.5e-08 63.9 69 50.7
VMungo1215G1309 Vigna mungo HOM05D001250 ORTHO05D000627 1.5e-08 63.9 68 54.4
Manes.01G196000 Manihot esculenta HOM05D001250 ORTHO05D000627 1.9e-08 63.5 76 51.3
Rhsim12G0125200 Rhododendron simsii HOM05D001250 ORTHO05D000627 1.9e-08 63.5 69 53.6
TAR371G0161 Trochodendron aralioides HOM05D001250 ORTHO05D000627 1.9e-08 63.5 69 52.2
Actinidia08184 Actinidia chinensis HOM05D001250 ORTHO05D000627 2.5e-08 63.2 67 55.2
Aqoxy3G03102 Aquilegia oxysepala HOM05D001250 ORTHO05D000627 2.5e-08 63.2 68 52.9
Cc11_g14160 Coffea canephora HOM05D001250 ORTHO05D000627 2.5e-08 63.2 65 53.8
TAR622G0054 Trochodendron aralioides HOM05D001250 ORTHO05D000627 3.3e-08 62.8 67 53.7
Thecc.02G240900 Theobroma cacao HOM05D001250 ORTHO05D000627 4.3e-08 62.4 68 52.9
Manes.05G093100 Manihot esculenta HOM05D001250 ORTHO05D000627 5.6e-08 62.0 65 55.4
Hma1.2p1_1049F.1_g251840 Hydrangea macrophylla HOM05D001250 ORTHO05D000627 7.4e-08 61.6 50 64.0
COL.COLO4_37888 Corchorus olitorius HOM05D001250 ORTHO05D000627 9.6e-08 61.2 74 47.3
Potri.010G036400 Populus trichocarpa HOM05D001250 ORTHO05D000627 9.6e-08 61.2 65 50.8
EL10Ac6g13753 Beta vulgaris HOM05D001250 ORTHO05D000627 1.3e-07 60.8 69 60.9
DCAR_026559 Daucus carota HOM05D001250 ORTHO05D000627 1.3e-07 60.8 68 57.4
Migut.L01453 Erythranthe guttata HOM05D001250 ORTHO05D000627 1.3e-07 60.8 83 56.6
Hma1.2p1_0160F.1_g070570 Hydrangea macrophylla HOM05D001250 ORTHO05D000627 1.3e-07 60.8 67 49.3
Oeu026673.1 Olea europaea HOM05D001250 ORTHO05D000627 1.3e-07 60.8 68 52.9
Sabra10G0028700 Salix brachista HOM05D001250 ORTHO05D000627 1.3e-07 60.8 65 52.3
MSTRG.2378 Avicennia marina HOM05D001250 ORTHO05D000627 1.6e-07 60.5 67 50.7
PSO832G4141 Papaver somniferum HOM05D001250 ORTHO05D000627 1.6e-07 60.5 67 52.2
MELO3C012028.2 Cucumis melo HOM05D001250 ORTHO05D000627 2.1e-07 60.1 48 60.4
Dinv09179 Davidia involucrata HOM05D007129 ORTHO05D008680 2.1e-07 60.1 45 60.0
Duzib251G0738 Durio zibethinus HOM05D001250 ORTHO05D000627 2.1e-07 60.1 68 47.1
Duzib248G0418 Durio zibethinus HOM05D001250 ORTHO05D000627 2.8e-07 59.7 67 52.2
PSO591G0228 Papaver somniferum HOM05D001250 ORTHO05D000627 2.8e-07 59.7 67 52.2
ClCG05G024980 Citrullus lanatus HOM05D001250 ORTHO05D000627 3.7e-07 59.3 50 60.0
Duzib268G1574 Durio zibethinus HOM05D001250 ORTHO05D000627 3.7e-07 59.3 68 54.4
Nn4g22907 Nelumbo nucifera HOM05D001250 ORTHO05D000627 3.7e-07 59.3 65 52.3
Nitab4.5_0006492g0010 Nicotiana tabacum HOM05D001250 ORTHO05D000627 3.7e-07 59.3 80 46.2
Eucgr.B02564 Eucalyptus grandis HOM05D001250 ORTHO05D000627 4.8e-07 58.9 72 47.2
PGSC0003DMG400015611 Solanum tuberosum HOM05D001250 ORTHO05D000627 4.8e-07 58.9 84 46.4
Dinv35024 Davidia involucrata HOM05D001250 ORTHO05D000627 6.2e-07 58.5 48 56.2
Gohir.D02G166300 Gossypium hirsutum HOM05D001250 ORTHO05D000627 6.2e-07 58.5 67 49.3
Gorai.005G186400 Gossypium raimondii HOM05D001250 ORTHO05D000627 6.2e-07 58.5 67 49.3
Lsat_1_v5_gn_8_160440 Lactuca sativa HOM05D001250 ORTHO05D000627 8.1e-07 58.2 34 79.4
Oeu012246.1 Olea europaea HOM05D001250 ORTHO05D000627 8.1e-07 58.2 46 63.0
SGA_v2.0_scaffold166G38329 Striga asiatica HOM05D001250 ORTHO05D000627 8.1e-07 58.2 73 49.3
Potri.008G193400 Populus trichocarpa HOM05D001250 ORTHO05D000627 1.1e-06 57.8 67 49.3
Sopen05g002280 Solanum pennellii HOM05D001250 ORTHO05D000627 1.1e-06 57.8 81 49.4
Peaxi162Scf01141g00013 Petunia axillaris HOM05D001250 ORTHO05D000627 1.4e-06 57.4 74 47.3
CAN.G159.18 Capsicum annuum HOM05D001250 ORTHO05D000627 1.8e-06 57.0 45 64.4
Eucgr.B03372 Eucalyptus grandis HOM05D001250 ORTHO05D000627 1.8e-06 57.0 66 45.5
HanXRQChr08g0209051 Helianthus annuus HOM05D001250 ORTHO05D000627 1.8e-06 57.0 43 65.1
Nitab4.5_0000257g0090 Nicotiana tabacum HOM05D001250 ORTHO05D000627 1.8e-06 57.0 67 49.3
Nitab4.5_0010523g0020 Nicotiana tabacum HOM05D001250 ORTHO05D000627 1.8e-06 57.0 67 49.3
CARHR010620 Cardamine hirsuta HOM05D001250 ORTHO05D000627 2.4e-06 56.6 46 63.0
Gohir.A03G143001 Gossypium hirsutum HOM05D001250 ORTHO05D000627 2.4e-06 56.6 67 47.8
AL1G21280 Arabidopsis lyrata HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
BcaB08g37354 Brassica carinata HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
A09p65040 Brassica napus HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
C08p48840 Brassica napus HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
BolC8t52421H Brassica oleracea HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
BraA09t41847Z Brassica rapa HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
Thhalv10008773m.g Eutrema salsugineum HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
PSO478G5026 Papaver somniferum HOM05D001250 ORTHO05D000627 3.1e-06 56.2 66 48.5
Sp1g09110 Schrenkiella parvula HOM05D001250 ORTHO05D000627 3.1e-06 56.2 39 71.8
PGR119G2049 Punica granatum HOM05D001250 ORTHO05D000627 4.0e-06 55.8 40 67.5
Solyc05g006310.3 Solanum lycopersicum HOM05D001250 ORTHO05D000627 4.0e-06 55.8 81 48.1
vmacro16289 Vaccinium macrocarpon HOM05D001250 ORTHO05D000627 4.0e-06 55.8 35 82.9
AT1G10480 Arabidopsis thaliana HOM05D001250 ORTHO05D000627 5.3e-06 55.5 89 42.7
MSTRG.7865 Avicennia marina HOM05D001250 ORTHO05D000627 5.3e-06 55.5 67 41.8
A08p33960 Brassica napus HOM05D001250 ORTHO05D000627 5.3e-06 55.5 39 66.7
C08p13710 Brassica napus HOM05D001250 ORTHO05D000627 5.3e-06 55.5 39 66.7
BolC8t49007H Brassica oleracea HOM05D001250 ORTHO05D000627 5.3e-06 55.5 39 66.7
BraA08t35309Z Brassica rapa HOM05D001250 ORTHO05D000627 5.3e-06 55.5 39 66.7
Carub.0001s0991 Capsella rubella HOM05D001250 ORTHO05D000627 5.3e-06 55.5 39 66.7
CiPaw.06G075500 Carya illinoinensis HOM05D001250 ORTHO05D000627 5.3e-06 55.5 48 66.7
Oeu017600.1 Olea europaea HOM05D001250 ORTHO05D000627 5.3e-06 55.5 68 48.5
Peaxi162Scf01206g00012 Petunia axillaris HOM05D001250 ORTHO05D000627 5.3e-06 55.5 40 62.5
THA.LOC104817063 Tarenaya hassleriana HOM05D001250 ORTHO05D000627 5.3e-06 55.5 36 66.7
BcaC07g41820 Brassica carinata HOM05D001250 ORTHO05D000627 6.9e-06 55.1 39 71.8
HanXRQChr12g0371271 Helianthus annuus HOM05D001250 ORTHO05D000627 6.9e-06 55.1 83 41.0
Nn3g16998 Nelumbo nucifera HOM05D001250 ORTHO05D000627 6.9e-06 55.1 67 47.8
ATR1149G134 Amborella trichopoda HOM05D001250 ORTHO05D000627 9.0e-06 54.7 64 48.4


User provided reference genes

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