Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.I2EFRY Arachis hypogaea HOM05D002864 ORTHO05D008485 1.9e-292 1008.4 513 100.0
arahy.Tifrunner.gnm1.ann1.G2UG47 Arachis hypogaea HOM05D006493 ORTHO05D009864 1.2e-140 504.2 306 88.9
arahy.Tifrunner.gnm1.ann1.PL6HV0 Arachis hypogaea HOM05D006493 ORTHO05D009864 1.2e-140 504.2 306 88.9
arahy.Tifrunner.gnm1.ann1.MR4QM2 Arachis hypogaea HOM05D006493 ORTHO05D084955 2.0e-140 503.4 258 100.0
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 1.1e-85 321.6 159 100.0
arahy.Tifrunner.gnm1.ann1.3LP0N0 Arachis hypogaea HOM05D002864 ORTHO05D008485 4.5e-84 316.2 158 98.1
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 8.0e-81 305.4 196 82.7
Lalb_Chr00c21g0405111 Lupinus albus HOM05D002864 ORTHO05D008485 6.8e-80 302.4 174 87.9
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 6.8e-80 302.4 174 87.9
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 6.8e-80 302.4 174 87.9
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 6.8e-80 302.4 174 87.9
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 6.8e-80 302.4 174 87.9
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 6.8e-80 302.4 174 87.9
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 3.7e-78 296.6 159 93.1
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 2.4e-77 293.9 159 92.5
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 2.4e-77 293.9 159 92.5
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 2.4e-77 293.9 159 92.5
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
BolSC28t60317H Brassica oleracea HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
BraSC48t46241Z Brassica rapa HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
BraSC48t46332Z Brassica rapa HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 91.8
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 7.0e-77 292.4 159 92.5
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.0e-76 290.8 159 91.8
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 2.0e-76 290.8 159 92.5
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 2.0e-76 290.8 159 92.5
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 2.7e-76 290.4 159 91.2
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 3.5e-76 290.0 159 91.2
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 2.9e-75 287.0 159 90.6
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 3.2e-74 283.5 159 88.7
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 2.7e-73 280.4 160 89.4
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 2.7e-73 280.4 160 89.4
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 1.4e-72 278.1 162 87.7
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 2.6e-71 273.9 161 88.8
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 1.3e-70 271.6 161 88.2
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 1.1e-69 268.5 160 86.2
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 1.1e-69 268.5 160 86.2
AUR62042335 Chenopodium quinoa HOM05D002864 ORTHO05D008485 2.4e-69 267.3 160 85.6
Lj2P1221T99 Lonicera japonica HOM05D002864 ORTHO05D008485 2.0e-68 264.2 156 88.5
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 4.5e-68 263.1 161 85.7
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 1.7e-67 261.2 174 78.2
SalBow1G5070 Salvia bowleyana HOM05D002864 ORTHO05D008485 1.7e-67 261.2 160 85.0
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 1.9e-66 257.7 161 83.9
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 1.9e-66 257.7 161 83.9
CAN.G366.9 Capsicum annuum HOM05D002864 ORTHO05D008485 7.3e-66 255.8 161 85.1
CAN.G537.1 Capsicum annuum HOM05D002864 ORTHO05D008485 7.3e-66 255.8 161 85.1
CAN.G539.3 Capsicum annuum HOM05D002864 ORTHO05D008485 7.3e-66 255.8 161 85.1
CAN.G761.1 Capsicum annuum HOM05D002864 ORTHO05D008485 7.3e-66 255.8 161 85.1
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 1.2e-65 255.0 161 83.2
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 1.2e-65 255.0 161 83.2
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 2.1e-65 254.2 162 79.6
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 8.0e-65 252.3 159 81.8
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 7.5e-63 245.7 161 83.9
SGA_v2.0_scaffold420G51305 Striga asiatica HOM05D002864 ORTHO05D008485 1.3e-62 245.0 168 79.2
DCAR_032433 Daucus carota HOM05D002864 ORTHO05D008485 9.2e-61 238.8 160 79.4
unitig_87.g28031 Utricularia gibba HOM05D002864 ORTHO05D008485 3.5e-60 236.9 161 81.4
Gohir.A06G146200 Gossypium hirsutum HOM05D002864 ORTHO05D008485 4.6e-60 236.5 134 88.8
Ah.09g227250 Amaranthus hybridus HOM05D002864 ORTHO05D008485 5.0e-59 233.0 147 82.3
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 9.5e-58 228.8 134 87.3
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 8.0e-57 225.7 148 81.8
Rhsim07G0136600 Rhododendron simsii HOM05D002864 ORTHO05D008485 8.9e-56 222.2 161 75.8
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.4e-55 220.3 149 82.6
HanXRQChr01g0001471 Helianthus annuus HOM05D002864 ORTHO05D008485 1.3e-54 218.4 160 74.4
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.2e-54 217.6 148 81.1
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 1.0e-51 208.8 135 85.2
HanXRQChr13g0389461 Helianthus annuus HOM05D002864 ORTHO05D008485 2.3e-51 207.6 150 74.0
Nitab4.5_0004300g0150 Nicotiana tabacum HOM05D002864 ORTHO05D008485 1.6e-49 201.4 161 71.4
Lsat_1_v5_gn_7_25860 Lactuca sativa HOM05D002864 ORTHO05D008485 3.6e-49 200.3 129 82.2
Lsat_1_v5_gn_5_71841 Lactuca sativa HOM05D002864 ORTHO05D008485 3.4e-47 193.7 133 78.9
SHI40661 Sapria himalayana HOM05D002864 ORTHO05D008485 3.4e-47 193.7 146 76.0
arahy.Tifrunner.gnm1.ann1.G1F49J Arachis hypogaea HOM05D002864 ORTHO05D008485 3.9e-43 180.3 143 70.6
Zm00001eb299530 Zea mays HOM05D002864 ORTHO05D008485 4.0e-40 170.2 162 56.2
HanXRQChr13g0393901 Helianthus annuus HOM05D002864 ORTHO05D008485 5.2e-40 169.9 119 75.6
arahy.Tifrunner.gnm1.ann1.IM9F8N Arachis hypogaea HOM05D002864 ORTHO05D008485 2.0e-39 167.9 161 60.9
RcHm_v2.0_Chr5g0061711 Rosa chinensis HOM05D002864 ORTHO05D008485 3.4e-39 167.2 162 60.5
ClCG06G009270 Citrullus lanatus HOM05D002864 ORTHO05D008485 7.6e-39 166.0 139 64.7
Gohir.D12G077000 Gossypium hirsutum HOM05D002864 ORTHO05D008485 4.9e-38 163.3 159 60.4
FvH4_3g34030 Fragaria vesca HOM05D002864 ORTHO05D008485 1.9e-37 161.4 186 52.7
FAN11G1817 Fragaria x ananassa HOM05D002864 ORTHO05D008485 1.9e-37 161.4 186 52.7
ATR0709G086 Amborella trichopoda HOM05D002864 ORTHO05D008485 4.1e-37 160.2 115 70.4
FAN21G0602 Fragaria x ananassa HOM05D002864 ORTHO05D008485 7.1e-37 159.5 263 43.3
FAN16G0826 Fragaria x ananassa HOM05D002864 ORTHO05D008485 9.2e-37 159.1 194 52.1
SEGI_29573 Sequoiadendron giganteum HOM05D002864 ORTHO05D008485 1.7e-35 154.8 160 58.1
Solyc09g050040.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.0e-32 143.7 107 75.7
HanXRQChr13g0389471 Helianthus annuus HOM05D002864 ORTHO05D008485 2.0e-31 141.4 86 82.6
MELO3C035260.2 Cucumis melo HOM05D002864 ORTHO05D008485 6.4e-30 136.3 96 75.0
MELO3C000759.2 Cucumis melo HOM05D002864 ORTHO05D008485 3.2e-29 134.0 96 74.0
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 3.5e-28 130.6 152 53.9
CAN.G1542.4 Capsicum annuum HOM05D002864 ORTHO05D008485 3.3e-26 124.0 106 66.0
MELO3C035317.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.4e-24 117.9 96 67.7
MELO3C005021.2 Cucumis melo HOM05D002864 ORTHO05D008485 4.0e-24 117.1 96 67.7
Nitab4.5_0000684g0100 Nicotiana tabacum HOM05D000729 ORTHO05D001063 8.4e-22 109.4 69 78.3
arahy.Tifrunner.gnm1.ann1.DPSP8K Arachis hypogaea HOM05D006493 ORTHO05D085052 9.6e-18 95.9 196 41.3
CAN.G826.1 Capsicum annuum HOM05D002864 ORTHO05D008485 1.5e-15 88.6 58 79.3
AagrBONN_evm.TU.Sc2ySwM_117.2676 Anthoceros agrestis HOM05D002864 ORTHO05D008485 3.4e-15 87.4 185 32.4
arahy.Tifrunner.gnm1.ann1.65WLLI Arachis hypogaea HOM05D002864 ORTHO05D008485 9.9e-15 85.9 40 100.0
Ca_08792_v3 Cicer arietinum L. HOM05D000255 ORTHO05D028863 9.9e-15 85.9 83 56.6
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 9.9e-15 85.9 83 56.6
Nitab4.5_0024895g0040 Nicotiana tabacum HOM05D002864 ORTHO05D008485 2.2e-14 84.7 76 64.5
Actinidia34819 Actinidia chinensis HOM05D002864 ORTHO05D008485 3.8e-14 84.0 47 89.4
ClCG02G008120 Citrullus lanatus HOM05D002864 ORTHO05D008485 7.1e-13 79.7 53 75.5
CAN.G1439.10 Capsicum annuum HOM05D002864 ORTHO05D008485 9.3e-13 79.3 52 78.8
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 1.6e-12 78.6 47 85.1
PGSC0003DMG400033612 Solanum tuberosum HOM05D002864 ORTHO05D008485 2.7e-12 77.8 47 83.0
Mapoly0023s0175 Marchantia polymorpha HOM05D002864 ORTHO05D008485 3.5e-12 77.4 61 65.6
Solyc11g043190.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 5.1e-11 73.6 49 73.5
CAN.G1001.40 Capsicum annuum HOM05D002864 ORTHO05D008485 1.5e-10 72.0 47 74.5
ATR0091G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 4.3e-10 70.5 47 72.3
CAN.G1439.9 Capsicum annuum HOM05D002864 ORTHO05D008485 1.3e-09 68.9 39 76.9
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 1.6e-09 68.6 47 74.5
ATR0104G021 Amborella trichopoda HOM05D002864 ORTHO05D008485 3.7e-09 67.4 47 72.3
ATR0015G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 3.1e-08 64.3 42 71.4
Solyc01g049950.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 9.0e-08 62.8 59 64.4
Nitab4.5_0000317g0150 Nicotiana tabacum HOM05D002578 ORTHO05D002698 3.4e-07 60.8 39 71.8
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.5e-07 60.5 41 73.2
MELO3C031088.2 Cucumis melo HOM05D002864 ORTHO05D008485 5.8e-07 60.1 39 64.1
arahy.Tifrunner.gnm1.ann1.8E6DTP Arachis hypogaea HOM05D002864 ORTHO05D008485 1.0e-06 59.3 29 89.7
CAN.G502.17 Capsicum annuum HOM05D002864 ORTHO05D008485 1.0e-06 59.3 47 68.1
ATR0004G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 8.4e-06 56.2 49 55.1
ATR0135G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 8.4e-06 56.2 29 86.2
ATR0573G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 8.4e-06 56.2 42 69.0


User provided reference genes

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