Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FU8P75 Arachis hypogaea HOM05D000002 ORTHO05D006339 1.9e-58 228.8 104 100.0
arahy.Tifrunner.gnm1.ann1.01LB4B Arachis hypogaea HOM05D000002 ORTHO05D006339 5.6e-58 227.3 103 99.0
arahy.Tifrunner.gnm1.ann1.A2CGEK Arachis hypogaea HOM05D000002 ORTHO05D006339 7.1e-53 210.3 100 92.0
arahy.Tifrunner.gnm1.ann1.G0QTUI Arachis hypogaea HOM05D000002 ORTHO05D006339 1.9e-50 202.2 102 89.2
arahy.Tifrunner.gnm1.ann1.YYM1IM Arachis hypogaea HOM05D000002 ORTHO05D006339 3.1e-48 194.9 114 78.9
arahy.Tifrunner.gnm1.ann1.2JX1G7 Arachis hypogaea HOM05D000002 ORTHO05D006339 7.1e-45 183.7 88 89.8
arahy.Tifrunner.gnm1.ann1.BDIQ8A Arachis hypogaea HOM05D000002 ORTHO05D006339 2.1e-44 182.2 88 87.5
arahy.Tifrunner.gnm1.ann1.TJ5BAV Arachis hypogaea HOM05D000002 ORTHO05D006339 1.3e-43 179.5 88 87.5
arahy.Tifrunner.gnm1.ann1.M3F3BS Arachis hypogaea HOM05D000002 ORTHO05D006339 2.3e-43 178.7 89 87.6
Glyma.01G001600 Glycine max HOM05D000002 ORTHO05D006339 1.4e-37 159.5 88 77.3
Glyma.08G359600 Glycine max HOM05D000002 ORTHO05D006339 2.4e-37 158.7 88 76.1
Psat1g051320 Pisum sativum HOM05D000002 ORTHO05D006339 9.3e-37 156.8 88 77.3
Ca_25635_v3 Cicer arietinum L. HOM05D000002 ORTHO05D006339 7.9e-36 153.7 88 76.1
Phvul.004G178100 Phaseolus vulgaris HOM05D000002 ORTHO05D006339 2.3e-35 152.1 88 73.9
Lj2g0025887 Lotus japonicus HOM05D000002 ORTHO05D006339 3.9e-35 151.4 88 73.9
Nitab4.5_0000707g0040 Nicotiana tabacum HOM05D000002 ORTHO05D006339 2.5e-34 148.7 88 70.5
VMungo0464G2179 Vigna mungo HOM05D000002 ORTHO05D006339 3.3e-34 148.3 88 72.7
Lsat_1_v5_gn_1_27101 Lactuca sativa HOM05D000002 ORTHO05D006339 4.3e-34 147.9 88 69.3
Medtr6g093060 Medicago truncatula HOM05D000002 ORTHO05D006339 5.6e-34 147.5 88 73.9
CANSAT80G2875 Cannabis sativa HOM05D000002 ORTHO05D006339 9.6e-34 146.7 88 69.3
TAR369G0907 Trochodendron aralioides HOM05D000002 ORTHO05D006339 9.6e-34 146.7 88 68.2
PSO063G6760 Papaver somniferum HOM05D000002 ORTHO05D006339 1.6e-33 146.0 88 67.0
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-33 145.6 88 67.0
CAN.G219.70 Capsicum annuum HOM05D000002 ORTHO05D006339 2.8e-33 145.2 88 68.2
DCAR_015254 Daucus carota HOM05D000002 ORTHO05D006339 2.8e-33 145.2 88 70.5
PGSC0003DMG400006784 Solanum tuberosum HOM05D000002 ORTHO05D006339 3.7e-33 144.8 88 69.3
CSS0014851 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D006339 8.1e-33 143.7 88 67.0
CSS0036040 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D006339 8.1e-33 143.7 88 67.0
PSO782G0950 Papaver somniferum HOM05D000002 ORTHO05D006339 1.1e-32 143.3 88 65.9
Dinv42804 Davidia involucrata HOM05D000002 ORTHO05D006339 1.4e-32 142.9 88 68.2
Dinv43297 Davidia involucrata HOM05D000002 ORTHO05D006339 1.4e-32 142.9 88 68.2
Sopen01g034630 Solanum pennellii HOM05D000002 ORTHO05D006339 1.8e-32 142.5 88 68.2
Solyc01g087670.3 Solanum lycopersicum HOM05D000002 ORTHO05D006339 2.4e-32 142.1 88 67.0
vmacro13695 Vaccinium macrocarpon HOM05D000002 ORTHO05D006339 2.4e-32 142.1 88 65.9
Peaxi162Scf00694g00221 Petunia axillaris HOM05D000002 ORTHO05D006339 5.3e-32 141.0 88 67.0
GSVIVG01034133001 Vitis vinifera HOM05D000002 ORTHO05D006339 5.3e-32 141.0 88 64.8
QL11p008633 Quercus lobata HOM05D000002 ORTHO05D006339 9.0e-32 140.2 88 67.0
Haze_19096 Corylus avellana HOM05D000002 ORTHO05D006339 1.2e-31 139.8 88 65.9
Lj6A285T32 Lonicera japonica HOM05D000002 ORTHO05D006339 1.2e-31 139.8 88 67.0
Prupe.1G063600 Prunus persica HOM05D000002 ORTHO05D006339 1.2e-31 139.8 88 68.2
Hma1.2p1_0269F.1_g107850 Hydrangea macrophylla HOM05D000002 ORTHO05D006339 1.5e-31 139.4 88 64.8
Hma1.2p1_0269F.1_g107860 Hydrangea macrophylla HOM05D000002 ORTHO05D006339 1.5e-31 139.4 88 64.8
MD16G1237800 Malus domestica HOM05D000002 ORTHO05D006339 1.5e-31 139.4 88 63.6
MBI15_g00655_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D006339 2.0e-31 139.0 88 63.6
Cfa020756 Carpinus fangiana HOM05D000002 ORTHO05D006339 2.6e-31 138.7 88 64.8
MBI16_g00838_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D006339 2.6e-31 138.7 88 63.6
Hund15434 Selenicereus undatus HOM05D000002 ORTHO05D006339 3.4e-31 138.3 88 60.2
Migut.N01789 Erythranthe guttata HOM05D000002 ORTHO05D006339 4.5e-31 137.9 88 64.8
Eucgr.C02168 Eucalyptus grandis HOM05D000002 ORTHO05D006339 5.8e-31 137.5 88 63.6
MELO3C003929.2 Cucumis melo HOM05D000002 ORTHO05D006339 7.6e-31 137.1 88 63.6
Oeu027399.3 Olea europaea HOM05D000002 ORTHO05D006339 7.6e-31 137.1 88 68.2
Aqoxy6G00620 Aquilegia oxysepala HOM05D000002 ORTHO05D006339 1.0e-30 136.7 88 67.0
ClCG11G011400 Citrullus lanatus HOM05D000002 ORTHO05D006339 1.0e-30 136.7 88 63.6
HanXRQChr01g0007691 Helianthus annuus HOM05D000002 ORTHO05D006339 1.0e-30 136.7 88 63.6
Lj4C850T6 Lonicera japonica HOM05D000002 ORTHO05D006339 1.0e-30 136.7 88 69.3
MD13G1232300 Malus domestica HOM05D000002 ORTHO05D006339 1.0e-30 136.7 88 61.4
Nn8g41139 Nelumbo nucifera HOM05D000002 ORTHO05D006339 1.0e-30 136.7 88 63.6
Cc02_g28480 Coffea canephora HOM05D000002 ORTHO05D006339 1.3e-30 136.3 88 60.2
Duzib150G0743 Durio zibethinus HOM05D000002 ORTHO05D006339 1.3e-30 136.3 88 65.9
Manes.18G125600 Manihot esculenta HOM05D000002 ORTHO05D006339 1.7e-30 136.0 88 62.5
PGR044G0614 Punica granatum HOM05D000002 ORTHO05D006339 1.7e-30 136.0 88 62.5
RcHm_v2.0_Chr4g0397311 Rosa chinensis HOM05D000002 ORTHO05D006339 1.7e-30 136.0 88 62.5
CiPaw.16G104400 Carya illinoinensis HOM05D000002 ORTHO05D006339 2.2e-30 135.6 88 62.5
FvH4_4g06010 Fragaria vesca HOM05D000002 ORTHO05D006339 2.2e-30 135.6 88 63.6
FAN07G2584 Fragaria x ananassa HOM05D000002 ORTHO05D006339 2.2e-30 135.6 88 63.6
FAN12G3290 Fragaria x ananassa HOM05D000002 ORTHO05D006339 2.2e-30 135.6 88 63.6
FAN22G1697 Fragaria x ananassa HOM05D000002 ORTHO05D006339 2.2e-30 135.6 88 63.6
Cpa.g.c29901 Carica papaya HOM05D000002 ORTHO05D006339 2.9e-30 135.2 88 61.4
Sc16g0000960 Simmondsia chinensis HOM05D000002 ORTHO05D006339 2.9e-30 135.2 88 59.1
Sc16g0001110 Simmondsia chinensis HOM05D000002 ORTHO05D006339 2.9e-30 135.2 88 59.1
MSTRG.4228 Avicennia marina HOM05D000002 ORTHO05D006339 3.8e-30 134.8 88 61.4
Os06g0644600 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D006339 3.8e-30 134.8 88 61.4
SGA_v2.0_scaffold7G03720 Striga asiatica HOM05D000002 ORTHO05D006339 3.8e-30 134.8 88 62.5
Ciclev10007395m.g Citrus clementina HOM05D000002 ORTHO05D006339 4.9e-30 134.4 88 61.4
Lalb_Chr24g0394161 Lupinus albus HOM05D000002 ORTHO05D006339 4.9e-30 134.4 90 65.6
Thecc.09G200300 Theobroma cacao HOM05D000002 ORTHO05D006339 4.9e-30 134.4 88 64.8
Atru.chr7.1011 Acer truncatum HOM05D000002 ORTHO05D006339 1.1e-29 133.3 88 62.5
BcaC09g51499 Brassica carinata HOM05D000002 ORTHO05D006339 1.1e-29 133.3 88 56.8
C03p36490 Brassica napus HOM05D000002 ORTHO05D006339 1.1e-29 133.3 88 56.8
BolC3t15962H Brassica oleracea HOM05D000002 ORTHO05D006339 1.1e-29 133.3 88 56.8
CDE07G0379 Ceratophyllum demersum HOM05D000002 ORTHO05D006339 1.9e-29 132.5 88 62.5
CsaV3_2G009090 Cucumis sativus L. HOM05D000002 ORTHO05D006339 1.9e-29 132.5 88 61.4
Thhalv10028405m.g Eutrema salsugineum HOM05D000002 ORTHO05D006339 1.9e-29 132.5 88 59.1
Sed0008706 Sechium edule HOM05D000002 ORTHO05D006339 1.9e-29 132.5 88 61.4
AUR62038500 Chenopodium quinoa HOM05D000002 ORTHO05D006339 2.5e-29 132.1 88 56.8
AUR62014228 Chenopodium quinoa HOM05D000002 ORTHO05D006339 3.2e-29 131.7 88 55.7
Nitab4.5_0004053g0040 Nicotiana tabacum HOM05D000002 ORTHO05D006339 3.2e-29 131.7 78 71.8
Sp6g04020 Schrenkiella parvula HOM05D000002 ORTHO05D006339 3.2e-29 131.7 88 58.0
Gohir.A08G016100 Gossypium hirsutum HOM05D000002 ORTHO05D006339 4.2e-29 131.3 87 63.2
Gohir.D08G026300 Gossypium hirsutum HOM05D000002 ORTHO05D006339 4.2e-29 131.3 87 63.2
Gorai.004G022700 Gossypium raimondii HOM05D000002 ORTHO05D006339 4.2e-29 131.3 87 63.2
Oeu033365.1 Olea europaea HOM05D000002 ORTHO05D006339 4.2e-29 131.3 88 64.8
Aa31LG9G9550 Aethionema arabicum HOM05D000002 ORTHO05D006339 5.5e-29 131.0 88 58.0
COL.COLO4_34912 Corchorus olitorius HOM05D000002 ORTHO05D006339 5.5e-29 131.0 88 62.5
A03p30240 Brassica napus HOM05D000002 ORTHO05D006339 7.1e-29 130.6 88 55.7
THA.LOC104815310 Tarenaya hassleriana HOM05D000002 ORTHO05D006339 9.3e-29 130.2 88 59.1
TPR.G21348 Trifolium pratense HOM05D000002 ORTHO05D006339 9.3e-29 130.2 91 63.7
TWI34G1979 Tripterygium wilfordii HOM05D000002 ORTHO05D006339 9.3e-29 130.2 85 64.7
Ah.07g204660 Amaranthus hybridus HOM05D000002 ORTHO05D006339 1.2e-28 129.8 88 55.7
BraA03t12208Z Brassica rapa HOM05D000002 ORTHO05D006339 1.2e-28 129.8 88 55.7
Rhsim07G0058700 Rhododendron simsii HOM05D000002 ORTHO05D006339 1.2e-28 129.8 107 54.2
Sabra06G0059800 Salix brachista HOM05D000002 ORTHO05D006339 2.1e-28 129.0 88 60.2
Potri.006G078900 Populus trichocarpa HOM05D000002 ORTHO05D006339 6.0e-28 127.5 88 58.0
HPP92_004726 Vanilla planifolia HOM05D000002 ORTHO05D006339 7.9e-28 127.1 88 55.7
EL10Ac6g14036 Beta vulgaris HOM05D000002 ORTHO05D006339 2.3e-27 125.6 88 55.7
ATR0626G089 Amborella trichopoda HOM05D000002 ORTHO05D006339 5.1e-27 124.4 88 59.1
AL6G48450 Arabidopsis lyrata HOM05D000002 ORTHO05D006339 5.1e-27 124.4 88 56.8
arahy.Tifrunner.gnm1.ann1.0U8Z8Z Arachis hypogaea HOM05D000002 ORTHO05D023301 6.7e-27 124.0 57 94.7
Carub.0006s3286 Capsella rubella HOM05D000002 ORTHO05D006339 6.7e-27 124.0 88 55.7
CARHR252600 Cardamine hirsuta HOM05D000002 ORTHO05D006339 1.5e-26 122.9 88 54.5
AT4G04940 Arabidopsis thaliana HOM05D000002 ORTHO05D006339 3.3e-26 121.7 88 53.4
Potri.018G148066 Populus trichocarpa HOM05D000002 ORTHO05D006339 1.8e-24 115.9 88 53.4
SEGI_16871 Sequoiadendron giganteum HOM05D000002 ORTHO05D006339 7.6e-23 110.5 88 54.5
AagrBONN_evm.TU.Sc2ySwM_340.348 Anthoceros agrestis HOM05D000002 ORTHO05D006339 1.0e-22 110.2 89 55.1
Mapoly0004s0293 Marchantia polymorpha HOM05D000002 ORTHO05D006339 3.8e-22 108.2 89 52.8
Pp3c7_4500 Physcomitrium patens HOM05D000002 ORTHO05D006339 3.2e-21 105.1 89 50.6
arahy.Tifrunner.gnm1.ann1.I3DX6F Arachis hypogaea HOM05D000002 ORTHO05D006339 1.9e-18 95.9 66 66.7
CBR_g5707 Chara braunii HOM05D000002 ORTHO05D006339 1.9e-18 95.9 64 60.9
SMO361G0562 Selaginella moellendorffii HOM05D000002 ORTHO05D006339 1.0e-14 83.6 90 40.0
Cre10.g466250 Chlamydomonas reinhardtii HOM05D000002 ORTHO05D006339 1.5e-10 69.7 69 42.0
unitig_747.g21292 Utricularia gibba HOM05D000002 ORTHO05D006339 2.2e-09 65.9 38 65.8
SHI03137 Sapria himalayana HOM05D000002 ORTHO05D006339 1.8e-08 62.8 45 53.3
MCO04G295 Micromonas commoda HOM05D000002 ORTHO05D006339 4.5e-07 58.2 63 44.4


User provided reference genes

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