Gene: Solyc01g087670.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc01g087670.3
Transcript Identifier Solyc01g087670.3.1
Gene Type Coding gene
Location SL4.0ch01 : 74845032-74851354 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000002
#Genes/#Species 26594/98
Phylogenetic origin

ID ORTHO05D006339
#Genes/#Species 144/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc01g087670.3.1
uniprot A0A3Q7EJM7
gene_id Solyc01g087670

Descriptions

Short descriptions
Ortholog descriptions

Description WD40 repeat (AHRD V3.3 *** A0A200Q3A4_9MAGN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	IBA IEA	GOA Database	rRNA processing
GO:0006364	IEA	InterPro	rRNA processing

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0032040	IBA IEA	GOA Database	small-subunit processome
GO:0032040	IEA	InterPro	small-subunit processome
GO:0034388	IBA	GOA Database	Pwp2p-containing subcomplex of 90S preribosome

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain
IPR001680	WD40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR036322	WD40-repeat-containing domain superfamily
IPR007319	Small-subunit processome, Utp21

Mapman id	Description
17.1.3.2.1.3.2	Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (UTP21)