Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 2.4e-253 878.2 418 100.0
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 1.1e-242 842.8 413 97.3
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 3.5e-183 645.2 417 75.5
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 4.0e-179 631.7 418 74.9
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 6.8e-179 630.9 423 74.5
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 8.6e-166 587.4 433 70.0
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 4.3e-165 585.1 415 70.1
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 2.4e-160 569.3 399 71.9
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 1.6e-140 503.4 413 60.5
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 1.1e-139 500.7 418 59.6
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 8.9e-139 497.7 428 59.8
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 8.4e-137 491.1 415 60.0
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 7.8e-135 484.6 444 56.8
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.0e-134 484.2 429 56.9
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 1.7e-134 483.4 418 58.6
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 3.9e-134 482.3 416 58.7
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 5.1e-134 481.9 421 58.9
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 3.3e-133 479.2 416 58.7
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 2.1e-132 476.5 418 58.1
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 6.2e-132 474.9 428 57.5
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 1.8e-131 473.4 417 58.0
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 4.0e-131 472.2 416 57.9
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 3.4e-130 469.2 428 56.8
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 3.8e-129 465.7 416 57.5
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 9.3e-128 461.1 418 56.0
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 3.5e-127 459.1 421 55.8
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 4.6e-127 458.8 416 57.0
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 3.9e-126 455.7 426 55.6
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 4.0e-123 445.7 436 53.7
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 4.0e-123 445.7 430 54.7
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 6.9e-123 444.9 420 55.0
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 1.2e-122 444.1 420 55.2
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 1.7e-121 440.3 435 53.3
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 2.2e-121 439.9 435 53.3
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 8.4e-121 438.0 431 53.1
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 5.4e-120 435.3 446 53.1
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 7.1e-120 434.9 417 55.2
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 9.3e-120 434.5 438 53.2
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 2.1e-119 433.3 429 53.6
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 2.7e-119 433.0 437 51.9
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 7.9e-119 431.4 431 54.1
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 2.8e-116 422.9 433 50.6
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 4.0e-115 419.1 429 51.7
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 1.5e-114 417.2 437 48.5
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 9.9e-114 414.5 425 51.8
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 6.4e-113 411.8 440 49.8
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 1.1e-112 411.0 519 46.1
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 5.5e-112 408.7 425 50.4
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 5.5e-112 408.7 419 51.1
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 6.0e-111 405.2 437 49.9
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 2.4e-107 393.3 427 50.6
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 3.2e-104 382.9 408 51.2
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 7.1e-104 381.7 420 48.3
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 2.7e-103 379.8 433 49.4
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.1e-101 374.4 341 55.7
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 2.8e-100 369.8 350 54.0
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.1e-99 367.9 300 58.7
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 6.9e-99 365.2 488 42.4
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 2.6e-98 363.2 428 47.9
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 1.3e-97 360.9 474 44.3
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.3e-97 360.9 413 50.1
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.9e-96 357.1 415 49.6
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 3.2e-96 356.3 410 46.1
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 7.9e-95 351.7 430 46.5
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 2.0e-90 337.0 414 45.2
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 1.7e-89 334.0 432 42.4
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 1.6e-87 327.4 394 45.2
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 2.7e-87 326.6 337 52.5
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 5.1e-86 322.4 273 55.7
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 2.4e-83 313.5 342 49.4
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 5.3e-83 312.4 458 39.3
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 8.2e-76 288.5 352 46.6
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 3.5e-74 283.1 495 38.6
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 7.2e-72 275.4 456 36.6
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 4.2e-64 249.6 331 46.2
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 9.4e-64 248.4 368 41.0
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 5.7e-61 239.2 283 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 7.5e-61 238.8 435 34.9
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 4.1e-59 233.0 369 40.9
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 1.6e-58 231.1 302 45.4
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 6.1e-55 219.2 306 44.1
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.9e-44 183.7 157 56.1
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 4.1e-35 153.3 251 40.2
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 1.2e-26 125.2 59 86.4
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 2.4e-19 100.9 127 49.6
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 1.7e-12 78.2 55 63.6
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 4.9e-12 76.6 36 86.1
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 6.4e-12 76.3 77 49.4
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 1.1e-11 75.5 47 66.0
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 1.1e-11 75.5 77 48.1
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 1.1e-11 75.5 55 56.4
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 1.4e-11 75.1 46 69.6
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 1.9e-11 74.7 64 56.2
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 2.4e-11 74.3 47 66.0
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 2.4e-11 74.3 72 43.1
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 2.4e-11 74.3 51 60.8
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 2.4e-11 74.3 68 52.9
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 3.2e-11 73.9 55 56.4
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 3.2e-11 73.9 60 55.0
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 3.2e-11 73.9 77 48.1
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 4.2e-11 73.6 68 51.5
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 4.2e-11 73.6 56 62.5
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 4.2e-11 73.6 56 58.9
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 5.4e-11 73.2 46 67.4
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 5.4e-11 73.2 71 50.7
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 5.4e-11 73.2 66 50.0
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 5.4e-11 73.2 46 67.4
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 7.1e-11 72.8 46 67.4
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 7.1e-11 72.8 85 38.8
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 7.1e-11 72.8 129 43.4
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 7.1e-11 72.8 86 40.7
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 7.1e-11 72.8 43 69.8
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 9.3e-11 72.4 59 54.2
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 1.2e-10 72.0 46 67.4
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 1.2e-10 72.0 67 52.2
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 1.6e-10 71.6 43 67.4
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 1.6e-10 71.6 43 67.4
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 2.1e-10 71.2 50 62.0
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 2.1e-10 71.2 50 58.0
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 2.1e-10 71.2 48 58.3
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 2.7e-10 70.9 59 54.2
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 2.7e-10 70.9 55 54.5
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 2.7e-10 70.9 72 50.0
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 2.7e-10 70.9 43 65.1
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 2.7e-10 70.9 70 51.4
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.7e-10 70.9 70 51.4
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.7e-10 70.9 70 51.4
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.7e-10 70.9 70 51.4
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.7e-10 70.9 70 51.4
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 3.5e-10 70.5 44 63.6
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 6.0e-10 69.7 51 58.8
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 6.0e-10 69.7 43 65.1
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 6.0e-10 69.7 50 58.0
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 6.0e-10 69.7 51 56.9
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 6.0e-10 69.7 61 49.2
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 6.0e-10 69.7 41 68.3
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 6.0e-10 69.7 57 52.6
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 6.0e-10 69.7 60 48.3
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 6.0e-10 69.7 44 59.1
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 7.8e-10 69.3 40 70.0
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 7.8e-10 69.3 70 50.0
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 7.8e-10 69.3 46 60.9
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 7.8e-10 69.3 46 60.9
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 7.8e-10 69.3 70 44.3
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 1.0e-09 68.9 73 45.2
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 1.0e-09 68.9 41 63.4
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 1.0e-09 68.9 52 55.8
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 1.0e-09 68.9 43 65.1
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 1.3e-09 68.6 40 65.0
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 1.3e-09 68.6 40 65.0
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 1.3e-09 68.6 56 57.1
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 1.3e-09 68.6 40 67.5
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 1.3e-09 68.6 40 67.5
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 1.7e-09 68.2 71 50.7
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 1.7e-09 68.2 46 67.4
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 1.7e-09 68.2 43 62.8
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 1.7e-09 68.2 43 62.8
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 1.7e-09 68.2 80 40.0
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 2.3e-09 67.8 43 62.8
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.3e-09 67.8 66 50.0
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 2.3e-09 67.8 72 45.8
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 2.3e-09 67.8 80 43.8
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 2.3e-09 67.8 43 62.8
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 2.3e-09 67.8 43 65.1
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 3.0e-09 67.4 46 65.2
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 3.0e-09 67.4 44 61.4
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 3.0e-09 67.4 46 60.9
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 3.0e-09 67.4 43 62.8
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 3.9e-09 67.0 40 65.0
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 5.1e-09 66.6 40 67.5
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 5.1e-09 66.6 57 52.6
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 6.6e-09 66.2 40 60.0
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 6.6e-09 66.2 40 62.5
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 6.6e-09 66.2 44 56.8
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 8.7e-09 65.9 57 52.6
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 1.1e-08 65.5 40 60.0
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 1.1e-08 65.5 46 54.3
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 2.5e-08 64.3 52 53.8
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 3.3e-08 63.9 78 42.3
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 4.3e-08 63.5 43 62.8
SMO201G0222 Selaginella moellendorffii HOM05D000032 ORTHO05D009383 4.3e-08 63.5 49 55.1
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 1.3e-07 62.0 67 52.2
EL10Ac9g22788 Beta vulgaris HOM05D000032 ORTHO05D009383 1.4e-06 58.5 42 57.1
CSS0012229 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 6.9e-06 56.2 54 50.0


User provided reference genes

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