Gene: Solyc01g006340.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006340.3
  • Transcript Identifier Solyc01g006340.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 924275-927545 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006340.3.1
  • uniprot A0A3Q7E7Y3
  • gene_id Solyc01g006340

Descriptions

  • Description DEAD-box ATP-dependent RNA helicase 41 (AHRD V3.3 *** A0A2G3DEE5_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0004523
IEA
GOA DatabaseRNA-DNA hybrid ribonuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR007529 Zinc finger, HIT-type
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated