Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.4e-173 612.8 304 100.0
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.9e-171 605.1 304 98.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 2.8e-150 535.4 296 85.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 5.3e-149 531.2 301 84.4
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.2e-148 530.0 293 86.0
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.7e-147 526.2 296 84.5
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 8.5e-147 523.9 296 84.5
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.7e-145 518.8 297 84.5
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 4.6e-145 518.1 293 84.3
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.4e-141 506.5 293 81.9
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.0e-139 500.4 304 76.0
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.7e-139 499.6 304 76.0
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.4e-138 496.5 303 75.6
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.6e-137 493.0 304 74.7
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.1e-137 492.7 304 74.7
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 2.7e-137 492.3 303 75.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.4e-136 490.0 304 75.3
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 3.0e-136 488.8 303 74.3
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.9e-136 488.4 303 75.6
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 5.1e-136 488.0 303 75.6
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.1e-135 486.9 303 73.6
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 2.6e-135 485.7 302 74.8
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.6e-135 485.7 304 73.4
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.4e-135 485.0 303 75.2
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 7.4e-135 484.2 304 73.7
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 7.4e-135 484.2 299 76.3
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.3e-134 483.4 295 75.6
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.3e-134 483.4 303 73.6
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.8e-134 482.3 307 72.6
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.8e-134 482.3 307 72.6
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 4.8e-134 481.5 302 73.8
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 6.3e-134 481.1 302 73.2
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 8.2e-134 480.7 304 73.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 8.2e-134 480.7 307 72.3
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.1e-133 480.3 294 73.8
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.1e-133 480.3 303 73.3
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.8e-133 479.6 307 72.0
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.8e-133 479.6 295 74.6
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.1e-133 478.8 303 72.9
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.1e-133 478.4 307 72.0
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 9.1e-133 477.2 304 73.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 9.1e-133 477.2 303 72.6
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 9.1e-133 477.2 304 74.3
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 9.1e-133 477.2 307 72.0
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 9.1e-133 477.2 303 73.9
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.2e-132 476.9 321 71.0
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.5e-132 476.5 303 72.6
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.5e-132 476.5 295 74.2
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 2.6e-132 475.7 300 74.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 3.5e-132 475.3 303 73.6
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 3.5e-132 475.3 325 69.5
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 5.9e-132 474.6 304 74.7
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.3e-131 473.4 304 73.7
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.7e-131 473.0 299 72.9
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.2e-131 472.6 295 73.6
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.2e-131 472.6 303 73.3
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 3.8e-131 471.9 303 71.9
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.9e-130 469.5 303 71.6
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 4.2e-130 468.4 300 71.3
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 7.2e-130 467.6 301 72.4
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.1e-129 466.1 289 73.7
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.0e-128 463.8 301 70.4
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 2.0e-127 459.5 351 63.8
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 2.2e-126 456.1 322 68.0
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 2.8e-126 455.7 278 76.3
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 2.8e-126 455.7 301 71.4
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 8.2e-126 454.1 298 70.1
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 5.3e-125 451.4 298 70.5
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 5.3e-125 451.4 315 67.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 5.3e-125 451.4 298 70.5
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.2e-124 450.3 299 70.6
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.5e-124 448.7 296 71.3
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 7.7e-124 447.6 296 70.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 7.7e-124 447.6 296 70.9
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.0e-123 447.2 296 70.9
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.0e-123 447.2 298 67.4
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 1.3e-123 446.8 296 70.9
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.7e-123 446.4 298 69.1
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.9e-123 445.7 298 70.8
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 6.5e-123 444.5 298 69.1
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.9e-122 443.0 298 70.5
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.2e-122 441.8 298 68.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.0e-120 437.2 334 65.3
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 6.8e-120 434.5 298 67.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.2e-119 433.7 321 65.4
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 7.5e-119 431.0 291 69.1
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 4.8e-118 428.3 290 70.3
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 6.3e-118 427.9 264 74.6
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.4e-117 426.0 304 68.1
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 4.1e-117 425.2 266 72.6
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.0e-115 420.6 298 65.8
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 6.8e-112 407.9 304 64.8
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 3.7e-110 402.1 299 64.2
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 6.1e-97 358.2 220 74.1
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 7.5e-95 351.3 199 84.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 3.5e-92 342.4 300 55.0
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 2.1e-89 333.2 291 56.0
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 2.8e-89 332.8 290 53.1
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 8.0e-89 331.3 206 74.8
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 7.5e-87 324.7 286 55.6
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.1e-85 320.9 209 68.9
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.2e-73 280.8 187 71.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.3e-67 260.0 258 50.8
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 3.3e-66 256.1 166 71.7
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 5.6e-58 228.8 151 69.5
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.0e-56 222.6 151 68.2
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.3e-51 206.8 152 67.8
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.5e-47 194.1 142 66.2
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 6.5e-38 162.2 115 70.4
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 2.1e-36 157.1 106 72.6
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.0e-31 140.6 73 89.0
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 1.4e-27 127.9 82 75.6
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.0e-27 126.7 78 74.4
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.1e-26 124.8 333 27.0
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.1e-24 116.3 118 50.8
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-22 110.9 72 69.4
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.4e-21 107.8 301 26.6
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 1.4e-21 107.8 322 28.6
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.1e-08 65.1 41 75.6


User provided reference genes

Program Settings