Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.1e-66 256.5 136 100.0
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 6.8e-64 247.3 136 95.6
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 5.2e-56 221.1 142 84.5
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 5.4e-53 211.1 143 81.1
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.4e-40 169.9 125 74.4
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 2.4e-40 169.1 122 75.4
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.3e-38 163.3 130 70.8
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.7e-38 162.9 126 73.8
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 1.4e-37 159.8 113 72.6
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 7.1e-37 157.5 113 73.5
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 7.1e-37 157.5 120 70.8
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 3.5e-36 155.2 113 70.8
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 3.0e-35 152.1 116 68.1
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 1.5e-34 149.8 126 64.3
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.9e-34 149.4 123 65.9
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 5.6e-34 147.9 113 69.0
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 5.6e-34 147.9 116 68.1
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 2.1e-33 146.0 118 64.4
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 2.8e-33 145.6 127 62.2
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 6.2e-33 144.4 126 61.1
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 1.4e-32 143.3 124 61.3
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 1.8e-32 142.9 111 67.6
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 1.8e-32 142.9 126 62.7
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.8e-32 142.9 126 62.7
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 2.4e-32 142.5 124 62.9
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 2.4e-32 142.5 114 68.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.4e-32 142.5 123 62.6
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 5.3e-32 141.4 123 62.6
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 6.9e-32 141.0 115 67.0
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 6.9e-32 141.0 116 62.9
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.2e-31 140.2 114 66.7
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.2e-31 140.2 123 62.6
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.0e-31 139.4 121 62.0
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 2.6e-31 139.0 119 60.5
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.4e-31 138.7 126 58.7
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 3.4e-31 138.7 123 63.4
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 3.4e-31 138.7 123 63.4
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 4.5e-31 138.3 116 63.8
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 7.6e-31 137.5 126 59.5
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 7.6e-31 137.5 118 61.9
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 7.6e-31 137.5 123 62.6
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 7.6e-31 137.5 124 63.7
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.0e-30 137.1 122 59.8
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 1.3e-30 136.7 110 64.5
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 2.9e-30 135.6 119 58.8
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 2.9e-30 135.6 126 57.9
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 2.9e-30 135.6 126 57.9
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 4.9e-30 134.8 116 61.2
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 4.9e-30 134.8 126 57.9
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 4.9e-30 134.8 132 55.3
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 6.5e-30 134.4 116 61.2
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 6.5e-30 134.4 127 59.8
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 8.4e-30 134.0 125 59.2
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 8.4e-30 134.0 114 65.8
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 8.4e-30 134.0 114 65.8
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 8.4e-30 134.0 122 59.0
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 8.4e-30 134.0 106 69.8
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 1.1e-29 133.7 125 56.8
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.9e-29 132.9 132 55.3
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 2.5e-29 132.5 126 56.3
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 3.2e-29 132.1 126 57.1
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 3.2e-29 132.1 126 57.1
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 4.2e-29 131.7 114 64.9
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 4.2e-29 131.7 114 64.9
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 4.2e-29 131.7 114 64.9
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.5e-29 131.3 112 60.7
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 5.5e-29 131.3 123 61.8
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 5.5e-29 131.3 129 56.6
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 7.1e-29 131.0 132 53.0
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 9.3e-29 130.6 114 60.5
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 1.2e-28 130.2 110 62.7
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.6e-28 129.8 115 64.3
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.1e-28 129.4 112 60.7
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.1e-28 129.4 134 54.5
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 3.5e-28 128.6 133 57.1
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 6.0e-28 127.9 114 62.3
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.0e-27 127.1 125 57.6
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 1.0e-27 127.1 134 56.0
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.8e-27 126.3 131 55.7
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.8e-27 126.3 112 60.7
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.0e-27 125.6 113 61.1
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 5.1e-27 124.8 124 58.1
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 3.3e-26 122.1 131 54.2
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 3.3e-26 122.1 155 47.7
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.2e-25 119.4 153 47.1
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.1e-24 117.1 120 54.2
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 2.4e-24 115.9 124 54.0
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 9.0e-24 114.0 114 52.6
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.5e-23 113.2 114 53.5
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 7.6e-23 110.9 89 65.2
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.0e-22 110.5 83 65.1
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.3e-22 110.2 129 51.2
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 8.5e-22 107.5 116 55.2
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 1.6e-20 103.2 84 63.1
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.1e-20 102.8 86 62.8
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 3.6e-20 102.1 148 45.9
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 4.6e-20 101.7 86 60.5
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.0e-19 100.5 114 48.2
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.8e-19 99.8 126 52.4
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.8e-19 99.8 124 48.4
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.3e-18 95.5 84 59.5
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.7e-18 94.7 84 59.5
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.7e-18 94.7 84 59.5
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 7.4e-18 94.4 82 57.3
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 9.1e-16 87.4 67 64.2
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.5e-15 86.7 79 58.2
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 5.9e-15 84.7 118 39.0
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.4e-13 80.1 114 42.1
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.2e-13 79.0 68 58.8
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 4.2e-13 78.6 87 54.0
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 5.7e-10 68.2 102 36.3
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 2.4e-08 62.8 64 51.6
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 2.4e-08 62.8 89 47.2
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 7.0e-08 61.2 55 61.8
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 7.7e-07 57.8 39 66.7
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 2.9e-06 55.8 64 53.1


User provided reference genes

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