Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-221 773.1 403 100.0
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 1.4e-149 533.5 344 82.8
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.8e-149 533.1 483 64.8
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 4.6e-148 528.5 483 64.2
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-147 525.4 483 64.2
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 6.8e-136 488.0 482 61.4
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.4e-109 400.6 458 53.7
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 5.1e-107 392.1 453 52.3
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.4e-101 374.0 458 50.4
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.6e-100 370.5 457 49.9
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 7.9e-100 368.2 459 49.5
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 1.3e-99 367.5 458 49.6
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.5e-98 364.0 461 50.3
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 3.7e-97 359.4 458 50.0
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.1e-92 343.6 429 49.7
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 4.5e-79 299.3 459 42.7
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 4.7e-76 289.3 449 42.5
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 2.2e-73 280.4 459 40.5
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.4e-72 277.7 458 40.2
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 5.9e-71 272.3 456 39.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 6.5e-70 268.9 460 37.6
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 6.5e-70 268.9 520 37.1
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 9.4e-69 265.0 459 40.7
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 2.1e-68 263.8 454 39.0
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 2.7e-68 263.5 457 38.5
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 6.1e-68 262.3 470 37.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.4e-67 261.2 460 39.6
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.8e-67 260.8 461 39.3
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.9e-67 259.6 456 39.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 8.8e-67 258.5 456 38.2
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 4.4e-66 256.1 482 37.3
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 7.4e-66 255.4 452 36.3
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.7e-65 254.2 456 39.3
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.7e-65 254.2 456 39.3
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 6.3e-65 252.3 460 38.0
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.5e-63 246.5 457 36.8
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 5.9e-63 245.7 461 36.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.2e-62 243.8 461 37.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 5.0e-62 242.7 456 36.8
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.2e-61 240.0 456 35.7
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 4.2e-61 239.6 456 35.7
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.6e-60 237.7 463 35.9
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 1.4e-59 234.6 456 36.2
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.8e-59 234.2 459 35.9
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 3.0e-59 233.4 456 36.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.5e-58 231.1 547 31.6
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 4.4e-58 229.6 464 35.6
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 7.5e-58 228.8 503 34.6
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 8.2e-57 225.3 405 38.0
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.4e-56 224.6 458 36.2
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 9.1e-56 221.9 455 36.0
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 9.1e-56 221.9 457 35.0
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.2e-55 221.5 363 38.3
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.0e-55 220.7 479 33.6
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 4.5e-55 219.5 477 33.3
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 7.7e-55 218.8 461 34.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.9e-54 216.9 510 32.4
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.8e-54 216.5 365 38.4
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 5.0e-54 216.1 457 35.4
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 5.0e-54 216.1 461 34.1
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 8.5e-54 215.3 454 34.1
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 3.6e-52 209.9 451 33.0
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 8.0e-52 208.8 408 36.3
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 3.0e-51 206.8 458 33.0
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.0e-50 204.1 461 33.4
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 5.7e-50 202.6 446 35.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 3.7e-49 199.9 515 31.8
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 3.7e-49 199.9 435 34.3
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 4.8e-49 199.5 460 32.6
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 8.3e-49 198.7 460 33.3
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 8.3e-49 198.7 465 33.8
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.8e-48 197.6 365 37.3
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 2.4e-48 197.2 506 30.8
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.2e-47 194.9 456 32.2
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 2.0e-47 194.1 459 31.6
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.0e-46 191.8 455 33.0
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.3e-46 190.7 421 33.0
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 6.5e-46 189.1 458 31.0
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 6.5e-46 189.1 451 31.5
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.3e-45 186.8 366 36.3
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 9.5e-45 185.3 451 31.0
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.2e-44 184.9 452 31.0
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.6e-44 184.5 455 31.6
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 2.1e-44 184.1 426 31.7
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 6.1e-44 182.6 446 30.7
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 2.3e-43 180.6 467 30.4
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 4.4e-42 176.4 453 30.7
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 4.4e-42 176.4 242 45.9
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 5.7e-42 176.0 301 37.9
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 3.7e-41 173.3 464 28.9
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.5e-39 166.8 248 42.7
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 2.5e-37 160.6 385 34.3
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 9.8e-34 148.7 296 34.8
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.9e-33 146.4 302 34.1
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 4.9e-33 146.4 462 27.1
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.1e-32 145.2 448 27.7
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.4e-32 144.1 302 33.8
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 4.7e-28 129.8 491 27.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.2e-26 125.2 276 32.2
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 5.4e-24 116.3 159 45.3
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.2e-23 115.2 378 27.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 2.3e-22 110.9 110 53.6
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.1e-21 108.6 163 41.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.1e-20 104.4 176 38.6
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 9.9e-18 95.5 96 53.1
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.2e-12 78.6 164 32.9
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.7e-09 68.2 298 25.5
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 2.4e-08 64.3 136 33.1
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.0e-06 58.9 48 56.2


User provided reference genes

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