Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 1.7e-64 249.2 126 100.0
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 1.7e-64 249.2 126 100.0
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 2.9e-56 221.9 126 84.1
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 3.7e-56 221.5 125 84.8
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 4.9e-56 221.1 126 87.3
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 4.1e-55 218.0 126 84.9
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 4.1e-55 218.0 124 84.7
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 5.4e-55 217.6 126 85.7
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 5.4e-55 217.6 123 85.4
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 7.0e-55 217.2 126 82.5
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 9.2e-55 216.9 119 86.6
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 1.2e-54 216.5 124 84.7
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 1.2e-54 216.5 124 84.7
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 1.6e-54 216.1 119 86.6
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 2.0e-54 215.7 124 81.5
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 3.5e-54 214.9 124 83.1
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 4.6e-54 214.5 126 81.7
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 4.6e-54 214.5 124 81.5
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 7.8e-54 213.8 126 81.0
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 1.3e-53 213.0 126 81.0
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 1.3e-53 213.0 126 81.0
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 1.3e-53 213.0 126 83.3
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 1.3e-53 213.0 124 83.9
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 1.7e-53 212.6 126 82.5
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 1.7e-53 212.6 124 81.5
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 2.9e-53 211.8 124 83.1
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 2.9e-53 211.8 124 83.9
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 2.9e-53 211.8 124 80.6
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 5.0e-53 211.1 124 81.5
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 5.0e-53 211.1 124 81.5
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 6.6e-53 210.7 119 85.7
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 8.6e-53 210.3 126 80.2
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 1.1e-52 209.9 126 80.2
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 1.9e-52 209.1 119 85.7
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 1.9e-52 209.1 124 79.0
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.9e-52 209.1 124 83.1
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 1.9e-52 209.1 119 84.9
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 1.9e-52 209.1 122 82.8
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 2.5e-52 208.8 126 80.2
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 4.3e-52 208.0 119 81.5
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 4.3e-52 208.0 119 84.0
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 5.6e-52 207.6 125 77.6
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 7.3e-52 207.2 119 85.7
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 7.3e-52 207.2 119 84.9
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 9.5e-52 206.8 122 82.8
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 1.2e-51 206.5 124 81.5
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 1.2e-51 206.5 122 83.6
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 1.6e-51 206.1 119 83.2
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 1.6e-51 206.1 118 83.1
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 1.6e-51 206.1 119 82.4
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 2.1e-51 205.7 119 83.2
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 2.1e-51 205.7 122 81.1
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 2.8e-51 205.3 119 83.2
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 3.6e-51 204.9 119 83.2
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 8.0e-51 203.8 119 82.4
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 8.0e-51 203.8 159 68.6
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 8.0e-51 203.8 119 83.2
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 1.0e-50 203.4 128 78.9
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 1.0e-50 203.4 119 83.2
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 1.4e-50 203.0 119 81.5
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 1.4e-50 203.0 126 79.4
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 2.3e-50 202.2 119 81.5
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.3e-50 202.2 118 83.1
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 2.3e-50 202.2 119 83.2
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.1e-50 201.8 119 83.2
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 4.0e-50 201.4 120 80.0
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 4.0e-50 201.4 124 79.0
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 5.2e-50 201.1 121 80.2
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 6.8e-50 200.7 124 78.2
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 6.8e-50 200.7 119 80.7
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 6.8e-50 200.7 124 77.4
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 6.8e-50 200.7 119 81.5
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 8.9e-50 200.3 124 78.2
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 8.9e-50 200.3 124 78.2
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 1.2e-49 199.9 126 78.6
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 1.2e-49 199.9 119 81.5
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 1.5e-49 199.5 124 80.6
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 7.5e-49 197.2 130 73.1
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 7.5e-49 197.2 124 76.6
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 7.5e-49 197.2 119 79.8
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 1.3e-48 196.4 110 86.4
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 1.7e-48 196.1 119 80.7
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 2.2e-48 195.7 119 79.0
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 3.7e-48 194.9 124 76.6
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 4.9e-48 194.5 119 78.2
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 4.9e-48 194.5 124 77.4
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 6.4e-48 194.1 122 77.9
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 3.2e-47 191.8 122 77.9
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.2e-47 191.8 109 85.3
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.1e-47 191.4 119 77.3
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 4.1e-47 191.4 119 77.3
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 5.4e-47 191.0 120 79.2
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 7.0e-47 190.7 126 80.2
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 7.0e-47 190.7 120 79.2
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 1.2e-46 189.9 119 77.3
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 6.0e-46 187.6 119 79.0
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.7e-45 186.0 124 74.2
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 3.0e-45 185.3 119 74.8
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 8.6e-45 183.7 120 73.3
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 9.5e-44 180.3 119 71.4
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 1.2e-43 179.9 119 70.6
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 2.1e-43 179.1 124 71.8
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 2.8e-43 178.7 126 67.5
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 4.7e-43 177.9 124 71.0
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 1.1e-42 176.8 119 75.6
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 8.9e-42 173.7 126 69.8
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.2e-41 173.3 126 69.8
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 3.4e-41 171.8 122 68.0
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 4.4e-41 171.4 119 68.1
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 5.8e-41 171.0 122 67.2
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 2.2e-40 169.1 124 67.7
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 3.7e-40 168.3 125 71.2
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 4.9e-40 167.9 123 63.4
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 1.9e-39 166.0 123 68.3
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 3.2e-39 165.2 124 67.7
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 3.2e-39 165.2 124 66.9
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 2.1e-38 162.5 99 78.8
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 1.7e-37 159.5 126 64.3
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 2.3e-37 159.1 107 74.8
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 2.8e-35 152.1 110 67.3
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 1.1e-34 150.2 96 74.0
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 1.4e-34 149.8 83 85.5
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 8.9e-34 147.1 126 61.1
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 1.3e-32 143.3 118 55.9
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 1.2e-30 136.7 126 57.9
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 1.2e-27 126.7 83 74.7
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 1.6e-27 126.3 121 57.9
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 2.8e-27 125.6 94 67.0
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 4.0e-26 121.7 122 51.6
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 5.2e-26 121.3 127 55.9
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 5.8e-25 117.9 82 73.2
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 7.6e-25 117.5 120 56.7
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 2.2e-24 115.9 62 88.7
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 2.4e-23 112.5 100 61.0
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 1.2e-22 110.2 67 76.1
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 6.0e-22 107.8 60 81.7
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 1.5e-20 103.2 85 67.1
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 2.5e-20 102.4 92 56.5
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 2.5e-20 102.4 87 57.5
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 4.6e-14 81.6 64 64.1
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 1.7e-13 79.7 103 49.5
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 2.4e-10 69.3 43 74.4
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.5e-09 66.6 109 38.5
MELO3C033382.2 Cucumis melo HOM05D004883 ORTHO05D005766 1.5e-09 66.6 39 74.4
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 2.6e-09 65.9 107 37.4
Cre14.g633550 Chlamydomonas reinhardtii HOM05D004883 ORTHO05D005766 5.5e-07 58.2 111 32.4


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