Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.8e-220 768.8 369 100.0
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.6e-219 765.8 369 99.5
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 8.7e-146 520.8 377 66.8
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 4.0e-143 511.9 372 66.4
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.0e-142 509.6 373 66.2
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 4.9e-141 505.0 364 65.7
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 8.4e-141 504.2 377 65.5
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.1e-140 503.8 377 64.7
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.9e-140 503.1 355 67.0
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 1.3e-138 496.9 368 64.9
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 4.3e-137 491.9 369 64.0
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 2.8e-136 489.2 364 66.2
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 5.3e-135 485.0 377 62.6
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 2.6e-134 482.6 364 65.7
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 4.5e-134 481.9 367 62.1
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 9.3e-132 474.2 356 64.0
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 7.9e-131 471.1 343 65.6
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 3.9e-130 468.8 359 61.3
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.9e-129 466.5 359 61.0
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.5e-129 466.1 364 62.1
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 5.7e-129 464.9 356 62.1
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 4.8e-128 461.8 344 64.0
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.0e-126 456.4 349 60.7
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 2.6e-126 456.1 351 62.1
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.7e-125 453.4 340 61.5
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.0e-125 451.8 340 61.2
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 6.5e-125 451.4 348 60.6
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 1.1e-124 450.7 340 61.2
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.5e-124 448.4 351 60.7
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.1e-121 440.7 373 56.3
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 2.5e-121 439.5 345 61.2
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 9.7e-121 437.6 312 66.3
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 2.2e-120 436.4 344 60.5
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 3.7e-120 435.6 352 59.1
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 6.3e-120 434.9 368 59.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 8.2e-120 434.5 351 58.7
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.8e-119 433.3 346 59.5
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 2.4e-119 433.0 353 60.3
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 4.1e-119 432.2 336 59.2
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 6.9e-119 431.4 364 54.7
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 1.0e-117 427.6 363 55.4
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 1.0e-117 427.6 346 58.7
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.1e-116 424.1 339 57.8
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.4e-116 423.7 339 58.7
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.9e-116 423.3 311 62.4
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 4.2e-116 422.2 357 54.9
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 7.2e-116 421.4 342 57.0
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.6e-115 420.2 352 59.1
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.1e-115 419.9 359 55.4
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 2.7e-115 419.5 353 57.8
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 4.7e-115 418.7 342 56.4
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.9e-114 415.6 321 62.6
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 8.8e-114 414.5 308 61.4
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 3.3e-113 412.5 311 62.1
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 4.4e-113 412.1 351 57.3
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 9.7e-113 411.0 342 56.1
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.3e-112 410.6 363 54.0
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.4e-111 407.1 348 55.5
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.4e-111 406.4 351 55.3
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 4.1e-111 405.6 308 60.7
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.6e-110 402.9 341 56.0
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.0e-109 401.0 384 53.6
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.3e-109 400.6 358 54.5
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.7e-109 400.2 352 53.4
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 2.2e-109 399.8 347 54.5
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.9e-109 399.4 352 56.0
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 5.0e-109 398.7 359 53.5
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 4.2e-108 395.6 359 53.2
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.2e-107 394.0 339 56.3
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 3.6e-107 392.5 353 53.3
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 8.0e-107 391.3 317 57.1
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 3.0e-106 389.4 359 50.7
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 5.2e-106 388.7 347 53.6
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.8e-106 387.9 343 53.6
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 3.3e-105 386.0 332 53.6
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 3.7e-104 382.5 361 49.3
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 6.3e-104 381.7 310 57.7
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 8.2e-104 381.3 350 51.7
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.4e-103 380.6 349 54.2
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 7.0e-103 378.3 355 50.7
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.6e-102 377.1 349 53.9
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.6e-102 377.1 341 54.5
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.0e-101 374.4 343 51.9
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.7e-101 373.6 361 51.0
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 2.2e-101 373.2 315 54.0
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 5.0e-101 372.1 349 53.6
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.1e-100 370.9 352 51.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 1.5e-100 370.5 317 55.5
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.9e-100 370.2 363 49.3
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 9.4e-100 367.9 349 49.0
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 9.4e-100 367.9 402 46.8
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.6e-99 367.1 352 52.0
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 6.1e-99 365.2 362 48.1
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.3e-98 363.2 366 48.6
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 5.2e-98 362.1 339 52.2
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 8.8e-98 361.3 354 49.7
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.5e-97 360.5 362 49.4
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.5e-97 360.5 365 47.4
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 2.0e-97 360.1 366 50.0
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.6e-97 359.8 366 48.4
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 5.7e-97 358.6 339 51.9
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.1e-95 352.8 358 50.6
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 5.3e-95 352.1 348 49.7
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 9.1e-95 351.3 241 67.2
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.2e-94 350.9 352 49.1
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.6e-94 350.5 363 49.6
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.7e-94 348.2 345 47.8
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 2.2e-93 346.7 362 48.3
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.9e-92 343.6 364 47.0
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.5e-92 343.2 284 52.8
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 6.1e-91 338.6 309 51.1
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 6.8e-90 335.1 357 47.3
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.2e-89 334.3 272 58.5
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.4e-89 332.4 348 46.6
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 5.7e-89 332.0 335 49.0
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.5e-89 331.6 367 45.8
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.5e-89 331.6 348 46.3
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 9.8e-89 331.3 280 53.9
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.7e-88 330.5 309 49.8
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 4.8e-88 328.9 348 46.0
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 6.3e-88 328.6 335 48.4
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 6.3e-88 328.6 346 48.0
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 8.3e-88 328.2 333 49.2
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.6e-86 323.9 345 47.2
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 2.0e-86 323.6 355 46.2
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 3.5e-86 322.8 335 47.8
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 3.5e-86 322.8 352 45.7
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.7e-85 320.5 352 45.5
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.9e-85 319.7 355 45.6
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 2.5e-84 316.6 339 46.3
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 7.2e-84 315.1 357 46.2
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.1e-83 313.5 284 52.8
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 8.0e-83 311.6 354 45.5
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 8.0e-83 311.6 354 45.5
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.8e-82 310.5 358 44.4
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 6.8e-82 308.5 338 46.2
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.3e-80 304.3 309 45.6
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 8.0e-75 285.0 244 57.4
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 1.7e-72 277.3 330 40.9
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.9e-72 275.8 315 43.8
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.1e-71 272.7 322 42.9
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 3.6e-67 259.6 319 40.8
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 4.0e-66 256.1 284 45.4
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.9e-64 249.2 328 40.2
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.1e-63 248.1 321 39.9
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.4e-63 245.7 321 39.9
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 2.3e-61 240.4 334 36.8
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 9.5e-60 235.0 290 40.7
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.8e-59 233.4 314 38.9
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.6e-59 233.0 225 47.6
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.4e-57 226.5 324 34.3
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 2.1e-54 217.2 272 39.0
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 2.7e-54 216.9 362 34.0
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 3.5e-54 216.5 319 37.0
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.2e-51 208.0 206 44.7
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.4e-50 204.5 288 37.8
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.4e-50 204.5 288 37.8
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.0e-49 200.7 270 35.9
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 9.9e-49 198.4 189 47.1
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.0e-42 176.4 156 52.6
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 6.0e-38 162.5 144 56.9
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.3e-37 161.4 132 53.0
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.0e-33 147.5 118 61.0
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 7.6e-33 145.6 132 50.0
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.9e-29 133.3 163 41.7
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.5e-28 130.6 256 32.8
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.7e-27 126.7 113 54.0
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.4e-26 124.8 79 64.6
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 4.0e-26 123.2 89 57.3
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.6e-25 119.0 164 34.1
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 1.6e-22 111.3 269 26.0
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 5.8e-17 92.8 60 65.0
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 6.1e-14 82.8 102 40.2
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 2.2e-11 74.3 68 54.4
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.1e-06 56.2 80 37.5


User provided reference genes

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