Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.3e-166 589.7 308 100.0
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.1e-157 558.5 331 89.7
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 9.2e-133 477.2 324 78.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 4.3e-130 468.4 324 76.9
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.6e-129 466.5 331 75.5
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 3.1e-128 462.2 329 75.4
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 3.1e-128 462.2 332 74.7
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 2.6e-127 459.1 325 75.4
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 4.4e-127 458.4 323 75.5
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.0e-123 447.2 329 72.6
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.1e-122 443.7 325 73.8
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 8.4e-118 427.6 319 71.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 1.5e-114 416.8 320 69.7
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 9.6e-114 414.1 327 69.4
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.8e-112 409.8 320 68.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 3.1e-112 409.1 322 68.6
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 4.4e-111 405.2 332 66.0
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.9e-109 399.8 321 65.7
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.4e-109 399.4 321 65.4
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 5.4e-109 398.3 318 66.0
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.2e-108 397.1 321 64.8
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 2.1e-108 396.4 321 63.9
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.1e-108 396.4 315 67.6
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 4.6e-108 395.2 330 65.5
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-107 393.7 327 65.7
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.7e-107 393.3 321 63.9
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.7e-107 393.3 330 63.3
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 3.0e-107 392.5 326 64.1
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 6.6e-107 391.3 327 65.1
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 8.7e-107 391.0 317 64.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.7e-107 391.0 327 65.1
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.1e-106 390.6 328 63.1
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-106 390.2 327 64.8
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.3e-106 389.0 327 64.5
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.3e-106 389.0 320 62.8
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.3e-106 389.0 320 62.8
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.6e-106 388.3 327 64.8
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 5.6e-106 388.3 330 64.2
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.3e-105 387.1 325 65.8
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.6e-105 385.6 318 64.8
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 3.6e-105 385.6 322 64.9
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.8e-105 385.2 327 64.2
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 9.0e-104 380.9 320 60.9
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 7.6e-103 377.9 320 60.3
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 2.2e-102 376.3 322 63.7
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 1.9e-101 373.2 321 63.9
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.9e-101 373.2 319 66.1
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 7.1e-101 371.3 300 66.0
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.2e-100 370.5 321 60.1
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 7.9e-100 367.9 319 63.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 1.3e-99 367.1 322 62.7
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 2.3e-99 366.3 321 60.4
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 2.3e-99 366.3 320 60.6
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 3.0e-99 365.9 321 60.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 5.1e-99 365.2 321 60.4
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 5.1e-99 365.2 319 60.5
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.7e-99 364.4 326 58.0
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.7e-99 364.4 326 58.0
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-98 364.0 321 60.1
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.5e-98 363.6 321 59.5
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 9.6e-98 360.9 319 61.4
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 1.6e-97 360.1 320 60.0
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.6e-97 360.1 326 58.9
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 3.7e-97 359.0 318 59.7
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 4.8e-97 358.6 268 74.3
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.1e-96 357.5 330 59.4
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 4.0e-96 355.5 319 58.0
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 6.9e-96 354.8 328 58.2
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.0e-95 353.2 325 57.5
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 9.9e-95 350.9 318 56.9
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.4e-93 347.1 319 59.9
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.9e-93 346.7 319 58.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 3.2e-93 345.9 322 58.4
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 3.2e-93 345.9 320 58.1
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.2e-93 345.9 304 60.2
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 4.2e-93 345.5 304 60.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 9.3e-93 344.4 321 58.3
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 6.0e-92 341.7 295 60.7
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 7.9e-92 341.3 322 56.5
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.9e-91 339.0 318 57.2
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 7.4e-90 334.7 325 55.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 1.4e-88 330.5 269 63.6
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.5e-87 327.0 320 55.6
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.9e-86 322.8 321 54.5
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 2.5e-85 319.7 326 54.6
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 5.7e-82 308.5 266 63.2
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.8e-81 306.2 328 53.4
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.6e-76 289.3 244 62.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 9.1e-72 274.6 321 49.2
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 2.0e-71 273.5 327 48.3
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 3.4e-71 272.7 271 53.9
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 5.5e-69 265.4 330 49.1
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 6.1e-68 261.9 328 48.2
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 4.4e-66 255.8 333 46.8
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 7.7e-63 245.0 316 45.3
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.0e-59 234.6 320 42.8
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 1.1e-58 231.1 163 72.4
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 4.8e-57 225.7 175 62.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.2e-55 221.1 199 58.8
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.5e-53 212.2 321 43.0
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.4e-51 207.6 226 54.4
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 5.7e-50 202.2 186 60.8
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 7.0e-48 195.3 202 52.5
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.7e-38 164.1 109 75.2
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.9e-38 163.3 109 75.2
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 9.8e-34 148.3 231 42.9
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 9.5e-29 131.7 86 73.3
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 4.3e-21 106.3 200 38.5
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 2.1e-20 104.0 120 45.8
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.5e-15 86.7 249 32.1
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.3e-14 84.7 272 25.0
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.5e-07 60.1 63 60.3


User provided reference genes

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