Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 7.5e-75 283.9 154 100.0
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 4.1e-73 278.1 154 97.4
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 2.9e-63 245.4 154 89.0
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 8.6e-63 243.8 154 88.3
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 1.9e-62 242.7 154 87.7
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 9.5e-62 240.4 151 85.4
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 1.2e-61 240.0 151 86.1
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 3.6e-61 238.4 155 85.2
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 1.0e-60 236.9 148 79.7
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 8.3e-58 227.3 145 79.3
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 2.3e-55 219.2 154 75.3
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 8.6e-55 217.2 155 77.4
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 3.3e-54 215.3 154 72.1
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 3.3e-54 215.3 153 71.2
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 3.3e-54 215.3 153 79.1
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 4.3e-54 214.9 154 72.1
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 7.3e-54 214.2 149 73.8
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 4.7e-53 211.5 155 72.3
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 6.1e-53 211.1 154 71.4
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 8.0e-53 210.7 154 73.4
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 1.0e-52 210.3 149 72.5
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 1.0e-52 210.3 149 72.5
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 1.4e-52 209.9 144 73.6
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 2.3e-52 209.1 150 81.3
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 2.3e-52 209.1 149 73.2
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 2.3e-52 209.1 154 70.1
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 3.1e-52 208.8 149 72.5
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 4.0e-52 208.4 153 69.3
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 5.2e-52 208.0 149 71.8
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 6.8e-52 207.6 155 71.0
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 1.2e-51 206.8 127 81.1
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 1.5e-51 206.5 127 81.1
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 2.0e-51 206.1 157 72.6
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 2.0e-51 206.1 126 79.4
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 4.4e-51 204.9 146 73.3
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 9.8e-51 203.8 145 72.4
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 2.2e-50 202.6 126 77.8
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 2.9e-50 202.2 156 71.8
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 3.7e-50 201.8 126 77.8
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 6.4e-50 201.1 126 78.6
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 6.4e-50 201.1 126 78.6
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 6.4e-50 201.1 126 78.6
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 8.3e-50 200.7 154 68.2
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 8.3e-50 200.7 154 68.2
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 8.3e-50 200.7 154 68.2
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 1.1e-49 200.3 156 73.1
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 1.4e-49 199.9 144 71.5
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 2.4e-49 199.1 154 66.9
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 3.2e-49 198.7 154 67.5
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 3.2e-49 198.7 142 69.7
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 4.1e-49 198.4 154 66.9
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 4.1e-49 198.4 154 68.8
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 5.4e-49 198.0 154 66.2
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 7.0e-49 197.6 154 67.5
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 9.2e-49 197.2 154 66.2
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 1.2e-48 196.8 156 73.7
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 1.6e-48 196.4 125 76.8
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 2.0e-48 196.1 153 75.2
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 2.7e-48 195.7 154 66.2
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 4.6e-48 194.9 154 66.9
HanXRQChr06g0169271 Helianthus annuus HOM05D004437 ORTHO05D005401 4.6e-48 194.9 154 69.5
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 6.0e-48 194.5 153 71.2
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 7.8e-48 194.1 157 64.3
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 7.8e-48 194.1 127 76.4
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 1.0e-47 193.7 154 68.2
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 1.3e-47 193.4 151 68.9
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 1.3e-47 193.4 157 67.5
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 1.7e-47 193.0 123 78.9
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 1.7e-47 193.0 151 68.9
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 2.3e-47 192.6 158 66.5
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 3.0e-47 192.2 159 66.0
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 3.9e-47 191.8 148 68.9
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 3.9e-47 191.8 128 72.7
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 6.6e-47 191.0 126 77.0
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 6.6e-47 191.0 154 70.1
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 1.1e-46 190.3 156 71.8
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 1.1e-46 190.3 125 76.0
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 1.5e-46 189.9 148 68.2
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 1.9e-46 189.5 154 67.5
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.5e-46 189.1 154 70.8
HanXRQChr04g0122121 Helianthus annuus HOM05D004437 ORTHO05D005401 2.5e-46 189.1 155 66.5
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 5.6e-46 188.0 158 71.5
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 9.5e-46 187.2 124 76.6
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 1.2e-45 186.8 148 75.0
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 1.6e-45 186.4 151 64.9
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 3.6e-45 185.3 157 65.6
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 4.7e-45 184.9 156 64.1
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-44 183.7 160 65.6
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 1.4e-44 183.3 123 75.6
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 1.8e-44 183.0 146 67.1
Lsat_1_v5_gn_7_59201 Lactuca sativa HOM05D004437 ORTHO05D005401 2.3e-44 182.6 166 68.7
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 2.3e-44 182.6 123 74.8
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 2.3e-44 182.6 156 64.1
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 2.3e-44 182.6 156 64.1
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 2.3e-44 182.6 156 64.1
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 1.5e-43 179.9 124 74.2
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 2.0e-43 179.5 125 73.6
AUR62017329 Chenopodium quinoa HOM05D004437 ORTHO05D005401 2.6e-43 179.1 149 64.4
ECA236G3516 Erigeron canadensis HOM05D004437 ORTHO05D005401 2.6e-43 179.1 123 76.4
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 4.4e-43 178.3 126 73.8
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 7.5e-43 177.6 144 63.2
CSS0011172 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 1.3e-42 176.8 118 76.3
ClCG00G000160 Citrullus lanatus HOM05D004437 ORTHO05D005401 2.2e-42 176.0 149 69.1
ClCG10G003410 Citrullus lanatus HOM05D004437 ORTHO05D005401 2.2e-42 176.0 149 69.1
COL.COLO4_12656 Corchorus olitorius HOM05D004437 ORTHO05D005401 2.9e-42 175.6 154 63.6
vmacro13357 Vaccinium macrocarpon HOM05D004437 ORTHO05D005401 3.7e-42 175.3 212 56.6
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 4.9e-42 174.9 125 70.4
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 6.4e-42 174.5 127 73.2
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 8.3e-42 174.1 175 57.1
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 1.4e-41 173.3 166 63.9
CSS0004475 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 2.4e-41 172.6 116 75.9
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 3.2e-41 172.2 120 72.5
AUR62004271 Chenopodium quinoa HOM05D004437 ORTHO05D005401 3.2e-41 172.2 120 70.8
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 5.4e-41 171.4 122 73.0
AUR62010560 Chenopodium quinoa HOM05D004437 ORTHO05D005401 7.1e-41 171.0 119 70.6
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 1.2e-40 170.2 117 72.6
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 1.6e-40 169.9 119 72.3
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 2.7e-40 169.1 109 74.3
Zm00001eb230470 Zea mays HOM05D004437 ORTHO05D005401 2.7e-40 169.1 154 60.4
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 3.0e-39 165.6 116 70.7
TPR.G14692 Trifolium pratense HOM05D004437 ORTHO05D005401 3.0e-39 165.6 136 66.9
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 6.6e-39 164.5 119 68.1
CBR_g4404 Chara braunii HOM05D004437 ORTHO05D005401 1.9e-38 162.9 124 66.1
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 7.3e-38 161.0 116 69.8
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 9.5e-38 160.6 125 68.0
MBI04_g06621_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 9.5e-38 160.6 104 78.8
MBI04_g34692_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 9.5e-38 160.6 104 78.8
Nitab4.5_0001127g0160 Nicotiana tabacum HOM05D004437 ORTHO05D005401 9.5e-38 160.6 146 61.0
FAN01G2781 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.1e-37 159.5 126 66.7
FAN06G0648 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.1e-37 159.5 126 66.7
FAN06G3102 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.1e-37 159.5 126 66.7
Nitab4.5_0001702g0190 Nicotiana tabacum HOM05D004437 ORTHO05D005401 8.1e-37 157.5 156 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis HOM05D004437 ORTHO05D005401 4.0e-36 155.2 111 70.3
FAN18G0922 Fragaria x ananassa HOM05D004437 ORTHO05D005401 4.0e-36 155.2 196 50.0
Nitab4.5_0004622g0030 Nicotiana tabacum HOM05D004437 ORTHO05D005401 8.9e-36 154.1 120 65.0
Ah.12g057860 Amaranthus hybridus HOM05D004437 ORTHO05D005401 2.6e-35 152.5 125 64.0
BcaC01g05120 Brassica carinata HOM05D004437 ORTHO05D005401 3.4e-35 152.1 118 63.6
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 3.4e-35 152.1 114 67.5
BcaC02g12196 Brassica carinata HOM05D004437 ORTHO05D005401 1.7e-34 149.8 102 72.5
Sabra03G0083300 Salix brachista HOM05D004437 ORTHO05D005401 4.9e-34 148.3 102 75.5
MD00G1131900 Malus domestica HOM05D004437 ORTHO05D005401 5.4e-33 144.8 155 51.6
Sabra01G0086400 Salix brachista HOM05D004437 ORTHO05D005401 5.4e-33 144.8 144 62.5
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 5.4e-33 144.8 91 75.8
DCAR_006889 Daucus carota HOM05D004437 ORTHO05D005401 6.0e-32 141.4 124 62.9
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 2.8e-29 132.5 118 55.9
HPP92_025880 Vanilla planifolia HOM05D004437 ORTHO05D005401 1.8e-28 129.8 95 69.5
Haze_26096 Corylus avellana HOM05D004437 ORTHO05D005401 2.7e-24 115.9 119 49.6
Lj9A574G30 Lonicera japonica HOM05D000186 ORTHO05D001124 2.7e-24 115.9 106 61.3
CDE04G2772 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 5.1e-23 111.7 76 77.6
EL10Ac5g12685 Beta vulgaris HOM05D004437 ORTHO05D005401 1.5e-22 110.2 133 48.1
Glyma.07G081500 Glycine max HOM05D004437 ORTHO05D005401 3.3e-22 109.0 60 86.7
Glyma.20G186451 Glycine max HOM05D004437 ORTHO05D005401 2.4e-20 102.8 61 83.6
Haze_16715 Corylus avellana HOM05D004437 ORTHO05D005401 3.4e-19 99.0 77 66.2
Actinidia31448 Actinidia chinensis HOM05D004437 ORTHO05D005401 5.8e-19 98.2 123 55.3
Zm00001eb230390 Zea mays HOM05D004437 ORTHO05D004372 9.9e-19 97.4 59 76.3
CAN.G126.10 Capsicum annuum HOM05D004437 ORTHO05D005401 4.9e-18 95.1 97 54.6
C03p30120 Brassica napus HOM05D004437 ORTHO05D005401 2.1e-16 89.7 75 62.7
Oeu058600.1 Olea europaea HOM05D004437 ORTHO05D005401 6.0e-16 88.2 74 64.9
BolC3t15361H Brassica oleracea HOM05D004437 ORTHO05D005401 1.7e-15 86.7 75 61.3
BraA03t11727Z Brassica rapa HOM05D004437 ORTHO05D005401 2.3e-15 86.3 75 61.3
A03p25260 Brassica napus HOM05D004437 ORTHO05D005401 1.1e-12 77.4 47 76.6
Cfa022890 Carpinus fangiana HOM05D004437 ORTHO05D037942 5.8e-11 71.6 151 30.5
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 7.6e-11 71.2 132 34.1
DCAR_008576 Daucus carota HOM05D004437 ORTHO05D005401 1.8e-07 60.1 144 34.0
BcaC09g48983 Brassica carinata HOM05D004437 ORTHO05D005401 5.1e-07 58.5 39 66.7


User provided reference genes

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