Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 3.2e-84 315.1 163 100.0
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 3.8e-69 265.0 141 97.9
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 5.5e-28 128.3 132 59.1
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 5.5e-28 128.3 132 59.1
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 7.2e-28 127.9 152 52.0
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 4.7e-27 125.2 132 53.8
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 1.0e-26 124.0 132 57.6
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.4e-26 123.6 132 54.5
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.8e-26 123.2 132 56.8
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.8e-26 123.2 132 57.6
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 1.8e-26 123.2 128 57.8
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 2.3e-26 122.9 132 55.3
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.3e-26 122.9 132 56.8
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.3e-26 122.9 128 57.0
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 3.0e-26 122.5 132 56.1
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.0e-26 122.1 132 56.1
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.0e-26 122.1 132 56.8
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 4.0e-26 122.1 132 55.3
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 5.2e-26 121.7 132 55.3
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 8.9e-26 120.9 132 53.8
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.2e-25 120.6 132 53.0
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.5e-25 120.2 132 56.1
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.5e-25 120.2 132 55.3
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.0e-25 119.8 133 51.9
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 2.0e-25 119.8 132 54.5
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.0e-25 119.8 132 54.5
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.0e-25 119.8 132 55.3
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.0e-25 119.8 132 53.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.6e-25 119.4 132 54.5
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.6e-25 119.4 132 53.0
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.6e-25 119.4 132 52.3
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.6e-25 119.4 132 54.5
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.4e-25 119.0 132 54.5
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 4.4e-25 118.6 128 53.1
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 4.4e-25 118.6 132 55.3
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 4.4e-25 118.6 132 53.8
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 4.4e-25 118.6 132 55.3
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 4.4e-25 118.6 134 53.7
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.7e-25 118.2 132 53.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 5.7e-25 118.2 132 51.5
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 5.7e-25 118.2 132 51.5
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 7.5e-25 117.9 132 54.5
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 7.5e-25 117.9 132 54.5
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 7.5e-25 117.9 132 54.5
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 1.3e-24 117.1 132 54.5
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 1.3e-24 117.1 132 54.5
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.7e-24 116.7 125 56.0
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 1.7e-24 116.7 132 53.8
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.7e-24 116.7 132 54.5
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 1.7e-24 116.7 132 54.5
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 2.2e-24 116.3 112 58.9
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.2e-24 116.3 112 59.8
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 2.2e-24 116.3 132 51.5
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.2e-24 116.3 133 55.6
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.8e-24 115.9 112 58.9
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.8e-24 115.9 134 52.2
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 2.8e-24 115.9 132 54.5
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 2.8e-24 115.9 132 50.0
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 2.8e-24 115.9 132 50.0
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.7e-24 115.5 134 52.2
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.7e-24 115.5 132 53.8
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 4.9e-24 115.2 112 59.8
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 4.9e-24 115.2 132 51.5
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 4.9e-24 115.2 85 68.2
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 6.3e-24 114.8 134 51.5
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 8.3e-24 114.4 112 58.9
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 8.3e-24 114.4 132 50.8
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 8.3e-24 114.4 131 53.4
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 8.3e-24 114.4 132 51.5
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 8.3e-24 114.4 132 53.8
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 1.1e-23 114.0 132 49.2
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-23 114.0 131 53.4
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.1e-23 114.0 114 57.9
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.4e-23 113.6 145 51.7
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 1.8e-23 113.2 131 53.4
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.8e-23 113.2 131 53.4
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.8e-23 113.2 132 53.0
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.8e-23 113.2 88 63.6
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.8e-23 113.2 131 52.7
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.4e-23 112.8 131 52.7
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 2.4e-23 112.8 131 52.7
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.4e-23 112.8 133 53.4
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.4e-23 112.8 133 55.6
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.4e-23 112.8 132 51.5
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 3.2e-23 112.5 131 52.7
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 3.2e-23 112.5 132 50.0
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 4.1e-23 112.1 131 51.9
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 4.1e-23 112.1 124 55.6
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 4.1e-23 112.1 133 49.6
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 5.4e-23 111.7 132 50.0
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 5.4e-23 111.7 131 51.9
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 5.4e-23 111.7 131 51.9
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 5.4e-23 111.7 133 48.9
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 7.0e-23 111.3 133 51.1
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 7.0e-23 111.3 131 53.4
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 7.0e-23 111.3 74 74.3
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 7.0e-23 111.3 88 63.6
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 7.0e-23 111.3 74 74.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.0e-23 111.3 84 65.5
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 9.2e-23 110.9 126 51.6
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 9.2e-23 110.9 132 53.0
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 9.2e-23 110.9 132 53.0
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.2e-22 110.5 132 50.0
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.2e-22 110.5 75 69.3
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.2e-22 110.5 132 53.8
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.2e-22 110.5 83 65.1
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.6e-22 110.2 132 52.3
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.0e-22 109.8 133 51.1
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 2.0e-22 109.8 133 49.6
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.0e-22 109.8 132 47.7
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.7e-22 109.4 132 53.8
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 2.7e-22 109.4 133 51.9
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 2.7e-22 109.4 129 50.4
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 3.5e-22 109.0 132 49.2
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 3.5e-22 109.0 133 49.6
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 3.5e-22 109.0 133 49.6
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 5.9e-22 108.2 87 65.5
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 5.9e-22 108.2 133 49.6
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 5.9e-22 108.2 68 70.6
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 7.8e-22 107.8 159 47.2
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.0e-21 107.5 133 51.1
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.0e-21 107.5 133 51.1
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.0e-21 107.5 133 51.1
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 1.0e-21 107.5 132 47.7
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.0e-21 107.5 133 47.4
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 1.7e-21 106.7 132 51.5
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.7e-21 106.7 132 52.3
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.3e-21 106.3 126 50.0
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.3e-21 106.3 132 48.5
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 2.3e-21 106.3 109 55.0
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 2.9e-21 105.9 132 51.5
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.9e-21 105.9 74 70.3
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 2.9e-21 105.9 132 48.5
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.9e-21 105.5 136 50.7
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 5.0e-21 105.1 112 53.6
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 6.6e-21 104.8 133 51.9
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 6.6e-21 104.8 133 51.9
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 6.6e-21 104.8 133 51.9
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 6.6e-21 104.8 133 51.9
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 8.6e-21 104.4 141 44.0
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-20 104.0 116 52.6
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 1.1e-20 104.0 121 50.4
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.1e-20 104.0 134 48.5
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.5e-20 103.6 112 50.0
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.5e-20 103.6 131 47.3
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.9e-20 103.2 132 50.8
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.5e-20 102.8 138 50.0
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 3.3e-20 102.4 101 62.4
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.3e-20 102.1 68 70.6
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.6e-19 100.1 133 48.1
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 2.8e-19 99.4 68 66.2
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.6e-19 99.0 126 51.6
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 4.7e-19 98.6 121 52.1
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 6.1e-19 98.2 121 54.5
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.4e-18 97.1 117 53.0
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.3e-18 96.3 140 45.0
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 5.2e-18 95.1 121 47.9
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.5e-17 93.6 157 40.1
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 3.4e-17 92.4 168 40.5
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 7.5e-17 91.3 101 57.4
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 6.4e-16 88.2 123 48.8
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 2.4e-15 86.3 132 43.9
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.2e-14 84.0 132 44.7
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.7e-13 80.1 114 43.9
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.1e-12 77.4 51 66.7
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.5e-12 77.0 132 40.2
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 4.3e-12 75.5 98 54.1
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 9.5e-12 74.3 78 61.5
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-11 73.9 97 54.6
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 2.8e-11 72.8 111 51.4
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 4.7e-11 72.0 99 54.5
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-09 67.4 118 43.2
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-09 67.4 118 43.2
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.7e-08 62.4 99 45.5
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.4e-07 59.7 83 53.0
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 3.2e-07 59.3 35 82.9
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 3.2e-07 59.3 99 43.4
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 4.1e-07 58.9 112 38.4
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 3.5e-06 55.8 48 52.1


User provided reference genes

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