Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 0.0e+00 1233.0 603 100.0
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.5e-251 872.8 448 95.1
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.9e-241 837.4 429 93.0
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.4e-240 835.1 429 92.8
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 8.4e-239 830.5 462 86.8
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.5e-237 825.1 430 90.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.9e-235 819.3 427 91.6
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 3.6e-234 815.1 425 91.3
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 8.1e-234 813.9 430 88.8
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 9.0e-233 810.4 429 89.3
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.2e-232 810.1 430 88.4
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.2e-232 810.1 430 88.4
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 3.4e-232 808.5 427 88.8
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 9.9e-232 807.0 429 89.0
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.7e-231 806.2 435 88.5
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 6.4e-231 804.3 429 88.1
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 2.4e-230 802.4 427 88.5
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.4e-230 802.4 426 88.3
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 3.2e-230 802.0 427 89.2
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 4.2e-230 801.6 430 87.9
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 5.4e-230 801.2 429 87.6
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 2.1e-229 799.3 455 85.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.1e-229 799.3 426 87.6
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.5e-229 798.5 456 84.0
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.3e-228 796.6 427 88.3
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.3e-228 795.8 426 88.0
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 8.7e-228 793.9 427 88.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.1e-227 793.5 429 86.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.9e-227 792.7 425 86.4
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 7.4e-227 790.8 433 84.3
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 9.6e-227 790.4 429 86.2
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 9.6e-227 790.4 424 87.5
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.3e-226 790.0 427 86.7
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.6e-226 789.6 429 87.6
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.6e-226 789.6 427 86.2
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.1e-226 789.3 431 86.8
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.8e-226 788.1 429 87.4
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.1e-225 786.9 429 85.8
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.4e-225 786.6 423 87.5
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 3.1e-225 785.4 430 86.3
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 5.3e-225 784.6 427 86.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 5.3e-225 784.6 425 87.3
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 9.0e-225 783.9 433 83.8
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.6e-224 782.3 425 87.5
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 3.4e-224 781.9 429 85.1
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 3.4e-224 781.9 429 85.8
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.5e-224 781.6 426 87.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 5.8e-224 781.2 430 85.8
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 7.6e-224 780.8 430 84.9
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.3e-223 780.0 427 85.7
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 2.9e-223 778.9 430 84.4
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 6.4e-223 777.7 426 86.2
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 6.4e-223 777.7 427 85.9
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 6.4e-223 777.7 430 84.4
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 6.4e-223 777.7 430 84.4
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 3.2e-222 775.4 430 84.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 5.5e-222 774.6 430 84.2
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 5.5e-222 774.6 456 80.7
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.2e-221 773.5 430 83.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.6e-221 773.1 415 87.5
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.5e-221 771.9 430 83.5
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.5e-221 771.9 425 86.6
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 6.0e-221 771.2 427 84.5
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-220 770.0 430 83.5
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.3e-220 770.0 430 83.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.3e-220 770.0 428 85.5
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.0e-220 768.8 430 83.3
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.9e-219 766.1 433 83.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 3.1e-217 758.8 426 82.6
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 9.0e-217 757.3 449 79.3
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 6.5e-215 751.1 422 82.0
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.4e-214 750.0 423 83.0
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 7.1e-214 747.7 447 81.0
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 4.6e-213 745.0 425 84.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.5e-211 740.0 425 81.2
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 6.3e-210 734.6 421 80.8
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 8.2e-210 734.2 425 82.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-208 730.3 429 79.5
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.5e-208 729.9 427 80.6
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.6e-208 729.2 399 86.5
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 5.0e-207 724.9 401 84.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 4.6e-205 718.4 561 66.7
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 6.7e-204 714.5 421 77.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-202 710.3 473 75.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 3.1e-201 705.7 418 77.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.4e-200 702.2 444 78.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 4.2e-198 695.3 423 75.2
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.8e-196 689.9 382 85.6
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.0e-196 689.1 426 76.8
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 5.1e-196 688.3 368 89.1
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.4e-193 680.2 457 73.5
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.4e-193 680.2 364 87.9
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 9.1e-193 677.6 523 66.7
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.5e-190 670.2 357 90.5
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.8e-188 663.3 387 81.7
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 5.3e-185 651.7 424 71.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.2e-184 650.6 426 73.9
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 8.3e-178 627.9 377 82.8
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.8e-177 626.7 401 75.6
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.7e-170 603.6 421 67.5
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.0e-167 594.3 427 66.0
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 3.4e-163 579.3 491 64.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 1.1e-145 521.2 305 83.0
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 6.2e-141 505.4 266 89.5
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 3.4e-139 499.6 272 86.4
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.4e-137 494.2 449 57.9
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.7e-136 490.0 373 63.3
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.8e-116 424.1 222 90.5
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.7e-66 258.1 147 81.0
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.4e-63 248.4 190 66.3
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 7.0e-60 236.1 147 75.5
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.0e-39 167.2 90 82.2
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 2.1e-27 128.3 79 72.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.5e-25 122.1 70 84.3
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 5.4e-20 103.6 57 82.5
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.8e-15 88.6 49 85.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.7e-11 74.7 42 78.6
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.6e-11 73.9 43 76.7
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.8 46 71.7
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.8e-07 62.0 40 75.0


User provided reference genes

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