Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7LCL4X Arachis hypogaea HOM05D001174 ORTHO05D001003 3.4e-61 238.0 111 100.0
arahy.Tifrunner.gnm1.ann1.JPX7RU Arachis hypogaea HOM05D001174 ORTHO05D001003 3.4e-61 238.0 111 100.0
arahy.Tifrunner.gnm1.ann1.DXS2NJ Arachis hypogaea HOM05D001174 ORTHO05D001003 6.7e-25 117.5 53 100.0
LjContig00141g0000877 Lotus japonicus HOM05D001174 ORTHO05D001003 1.9e-24 115.9 110 52.7
Phvul.008G238400 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 4.8e-23 111.3 56 91.1
VMungo0647G2455 Vigna mungo HOM05D001174 ORTHO05D001003 4.8e-23 111.3 56 91.1
Ca_05841_v3 Cicer arietinum L. HOM05D001174 ORTHO05D001003 8.2e-23 110.5 56 87.5
Lalb_Chr10g0104241 Lupinus albus HOM05D001174 ORTHO05D001003 8.2e-23 110.5 56 89.3
Lalb_Chr17g0346001 Lupinus albus HOM05D001174 ORTHO05D001003 1.4e-22 109.8 56 89.3
Psat2g046160 Pisum sativum HOM05D001174 ORTHO05D001003 1.8e-22 109.4 98 56.1
arahy.Tifrunner.gnm1.ann1.7R2T36 Arachis hypogaea HOM05D001174 ORTHO05D001003 3.4e-21 105.1 99 54.5
arahy.Tifrunner.gnm1.ann1.TSBJ8P Arachis hypogaea HOM05D001174 ORTHO05D001003 3.4e-21 105.1 99 54.5
Glyma.02G243200 Glycine max HOM05D001174 ORTHO05D001003 5.8e-21 104.4 96 59.4
Medtr5g077750 Medicago truncatula HOM05D001174 ORTHO05D001003 2.2e-20 102.4 98 54.1
Glyma.14G212300 Glycine max HOM05D001174 ORTHO05D001003 3.8e-20 101.7 59 84.7
TPR.G11027 Trifolium pratense HOM05D001174 ORTHO05D001003 7.1e-19 97.4 56 76.8
arahy.Tifrunner.gnm1.ann1.D3EZ0T Arachis hypogaea HOM05D001174 ORTHO05D001003 8.2e-15 84.0 40 100.0
CiPaw.03G074800 Carya illinoinensis HOM05D001174 ORTHO05D001003 8.2e-15 84.0 86 50.0
Cc07_g13160 Coffea canephora HOM05D001174 ORTHO05D001003 1.4e-14 83.2 55 65.5
PGR042G2215 Punica granatum HOM05D001174 ORTHO05D001003 1.4e-14 83.2 54 66.7
QL02p059620 Quercus lobata HOM05D001174 ORTHO05D001003 1.4e-14 83.2 86 50.0
Cfa007781 Carpinus fangiana HOM05D001174 ORTHO05D001003 6.9e-14 80.9 86 47.7
Nitab4.5_0005124g0080 Nicotiana tabacum HOM05D001174 ORTHO05D001003 6.9e-14 80.9 100 41.0
Haze_14291 Corylus avellana HOM05D001174 ORTHO05D001003 1.5e-13 79.7 86 47.7
Prupe.3G164800 Prunus persica HOM05D001174 ORTHO05D001003 1.5e-13 79.7 54 63.0
Dinv28177 Davidia involucrata HOM05D001174 ORTHO05D000292 2.0e-13 79.3 54 64.8
Gohir.A02G108901 Gossypium hirsutum HOM05D001174 ORTHO05D001003 2.0e-13 79.3 86 46.5
Gohir.D03G062000 Gossypium hirsutum HOM05D001174 ORTHO05D001003 2.0e-13 79.3 86 46.5
Gorai.013G106900 Gossypium raimondii HOM05D001174 ORTHO05D001003 2.0e-13 79.3 86 46.5
ClCG10G001160 Citrullus lanatus HOM05D001174 ORTHO05D001003 3.4e-13 78.6 52 65.4
Actinidia17192 Actinidia chinensis HOM05D001174 ORTHO05D001003 4.5e-13 78.2 55 61.8
RcHm_v2.0_Chr3g0492331 Rosa chinensis HOM05D001174 ORTHO05D001003 4.5e-13 78.2 82 51.2
Sed0024967 Sechium edule HOM05D001174 ORTHO05D001003 4.5e-13 78.2 52 63.5
DCAR_014154 Daucus carota HOM05D001174 ORTHO05D001003 5.9e-13 77.8 55 56.4
DCAR_014155 Daucus carota HOM05D001174 ORTHO05D001003 5.9e-13 77.8 55 56.4
MELO3C013808.2 Cucumis melo HOM05D001174 ORTHO05D001003 7.6e-13 77.4 52 63.5
CsaV3_3G001180 Cucumis sativus L. HOM05D001174 ORTHO05D001003 7.6e-13 77.4 52 63.5
FvH4_1g29990 Fragaria vesca HOM05D001174 ORTHO05D001003 1.0e-12 77.0 82 50.0
FAN19G2209 Fragaria x ananassa HOM05D001174 ORTHO05D001003 1.0e-12 77.0 82 50.0
MD09G1267100 Malus domestica HOM05D001174 ORTHO05D001003 1.3e-12 76.6 54 61.1
Nitab4.5_0001650g0050 Nicotiana tabacum HOM05D001174 ORTHO05D001003 1.3e-12 76.6 99 41.4
Solyc11g011560.3 Solanum lycopersicum HOM05D001174 ORTHO05D001003 1.3e-12 76.6 54 59.3
Sopen11g006430 Solanum pennellii HOM05D001174 ORTHO05D001003 1.3e-12 76.6 54 59.3
PGSC0003DMG400013247 Solanum tuberosum HOM05D001174 ORTHO05D001003 1.3e-12 76.6 54 59.3
PGSC0003DMG400036423 Solanum tuberosum HOM05D001174 ORTHO05D001003 1.3e-12 76.6 54 59.3
GSVIVG01030666001 Vitis vinifera HOM05D001174 ORTHO05D001003 1.3e-12 76.6 55 60.0
CAN.G222.78 Capsicum annuum HOM05D001174 ORTHO05D001003 1.7e-12 76.3 54 57.4
FAN23G2924 Fragaria x ananassa HOM05D001174 ORTHO05D001003 2.2e-12 75.9 82 48.8
FAN26G1916 Fragaria x ananassa HOM05D001174 ORTHO05D001003 2.2e-12 75.9 82 48.8
Manes.01G121000 Manihot esculenta HOM05D001174 ORTHO05D001003 2.2e-12 75.9 54 59.3
Nitab4.5_0009898g0040 Nicotiana tabacum HOM05D001174 ORTHO05D001003 2.2e-12 75.9 54 61.1
Thecc.08G138800 Theobroma cacao HOM05D001174 ORTHO05D001003 2.2e-12 75.9 86 44.2
Nitab4.5_0001438g0110 Nicotiana tabacum HOM05D001174 ORTHO05D001003 2.9e-12 75.5 54 59.3
Duzib093G1066 Durio zibethinus HOM05D001174 ORTHO05D001003 5.0e-12 74.7 86 44.2
Oeu012497.1 Olea europaea HOM05D001174 ORTHO05D001003 5.0e-12 74.7 55 58.2
TAR371G0619 Trochodendron aralioides HOM05D001174 ORTHO05D001003 5.0e-12 74.7 54 59.3
Migut.H02233 Erythranthe guttata HOM05D001174 ORTHO05D001003 1.1e-11 73.6 55 58.2
FAN28G1611 Fragaria x ananassa HOM05D001174 ORTHO05D001003 1.1e-11 73.6 52 63.5
Rhsim10G0180900 Rhododendron simsii HOM05D001174 ORTHO05D001003 1.1e-11 73.6 99 39.4
CSS0050231 Camellia sinensis var. sinensis HOM05D001174 ORTHO05D001003 1.4e-11 73.2 55 54.5
Peaxi162Scf00124g01724 Petunia axillaris HOM05D001174 ORTHO05D001003 1.4e-11 73.2 55 56.4
Sc11g0004670 Simmondsia chinensis HOM05D001174 ORTHO05D001003 2.5e-11 72.4 55 56.4
AUR62037364 Chenopodium quinoa HOM05D001174 ORTHO05D001003 3.2e-11 72.0 52 59.6
TWI77G0649 Tripterygium wilfordii HOM05D001174 ORTHO05D001003 3.2e-11 72.0 97 43.3
EL10Ac9g20685 Beta vulgaris HOM05D001174 ORTHO05D001003 4.2e-11 71.6 52 57.7
COL.COLO4_35484 Corchorus olitorius HOM05D001174 ORTHO05D001003 4.2e-11 71.6 54 55.6
FAN08G3192 Fragaria x ananassa HOM05D001174 ORTHO05D001003 4.2e-11 71.6 82 47.6
Lsat_1_v5_gn_3_65760 Lactuca sativa HOM05D001174 ORTHO05D001003 7.2e-11 70.9 57 54.4
HanXRQChr15g0483001 Helianthus annuus HOM05D001174 ORTHO05D001003 9.4e-11 70.5 57 52.6
Eucgr.J01622 Eucalyptus grandis HOM05D001174 ORTHO05D001003 1.2e-10 70.1 52 53.8
Atru.chr1.2010 Acer truncatum HOM05D001174 ORTHO05D001003 1.6e-10 69.7 54 55.6
Cpa.g.sc87.35 Carica papaya HOM05D001174 ORTHO05D001003 2.1e-10 69.3 77 41.6
AUR62042690 Chenopodium quinoa HOM05D001174 ORTHO05D001003 3.6e-10 68.6 52 55.8
Lj4C258T9 Lonicera japonica HOM05D001174 ORTHO05D001003 6.1e-10 67.8 55 50.9
Sabra17G0111100 Salix brachista HOM05D001174 ORTHO05D001003 6.1e-10 67.8 54 50.0
Sabra17G0114100 Salix brachista HOM05D001174 ORTHO05D001003 6.1e-10 67.8 54 50.0
SEGI_30421 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 7.9e-10 67.4 52 51.9
MD17G1260200 Malus domestica HOM05D001174 ORTHO05D001003 1.0e-09 67.0 54 55.6
Potri.017G135200 Populus trichocarpa HOM05D001174 ORTHO05D001003 1.0e-09 67.0 54 48.1
Cpa.g.sc87.13 Carica papaya HOM05D001174 ORTHO05D001003 1.8e-09 66.2 90 36.7
THA.LOC104805977 Tarenaya hassleriana HOM05D001174 ORTHO05D001003 1.8e-09 66.2 52 57.7
SGA_v2.0_scaffold108G30973 Striga asiatica HOM05D001174 ORTHO05D001003 3.0e-09 65.5 56 50.0
ECA234G1941 Erigeron canadensis HOM05D001174 ORTHO05D001003 3.9e-09 65.1 57 47.4
SEGI_11319 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 3.9e-09 65.1 52 48.1
Ciclev10007029m.g Citrus clementina HOM05D001174 ORTHO05D001003 5.1e-09 64.7 54 48.1
MBI13_g04214_MAGBIO Magnolia biondii HOM05D001174 ORTHO05D001003 6.7e-09 64.3 52 50.0
Ah.01g004360 Amaranthus hybridus HOM05D001174 ORTHO05D001003 8.8e-09 63.9 52 51.9
Aqoxy2G00632 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 8.8e-09 63.9 54 50.0
Cpa.g.sc87.9 Carica papaya HOM05D001174 ORTHO05D001003 8.8e-09 63.9 90 35.6
Haze_03409 Corylus avellana HOM05D001174 ORTHO05D001003 1.1e-08 63.5 55 49.1
Hma1.2p1_1450F.1_g284190 Hydrangea macrophylla HOM05D001174 ORTHO05D001003 1.5e-08 63.2 55 47.3
Cfa010455 Carpinus fangiana HOM05D001174 ORTHO05D001003 1.9e-08 62.8 89 38.2
CDE05G2775 Ceratophyllum demersum HOM05D001174 ORTHO05D001003 3.3e-08 62.0 53 50.9
AagrBONN_evm.TU.Sc2ySwM_362.679 Anthoceros agrestis HOM05D001174 ORTHO05D001003 4.3e-08 61.6 52 48.1
Aa31LG2G2880 Aethionema arabicum HOM05D001174 ORTHO05D001003 1.7e-07 59.7 54 51.9
BcaB05g24156 Brassica carinata HOM05D001174 ORTHO05D001003 1.7e-07 59.7 52 51.9
PSO017G0079 Papaver somniferum HOM05D001174 ORTHO05D001003 1.7e-07 59.7 54 50.0
Thhalv10018197m.g Eutrema salsugineum HOM05D001174 ORTHO05D001003 2.2e-07 59.3 52 50.0
Potri.008G137200 Populus trichocarpa HOM05D001174 ORTHO05D001003 2.2e-07 59.3 44 54.5
BcaC03g14733 Brassica carinata HOM05D001174 ORTHO05D001003 2.8e-07 58.9 52 51.9
C02p21800 Brassica napus HOM05D001174 ORTHO05D001003 2.8e-07 58.9 52 51.9
BolC2t08313H Brassica oleracea HOM05D001174 ORTHO05D001003 2.8e-07 58.9 52 51.9
Dinv05358 Davidia involucrata HOM05D001174 ORTHO05D001003 2.8e-07 58.9 55 49.1
Eucgr.G02081 Eucalyptus grandis HOM05D001174 ORTHO05D001003 4.8e-07 58.2 52 46.2
SMO356G0690 Selaginella moellendorffii HOM05D001174 ORTHO05D001003 4.8e-07 58.2 52 46.2
ATR0021G049 Amborella trichopoda HOM05D001174 ORTHO05D001003 6.3e-07 57.8 55 45.5
Sabra08G0104600 Salix brachista HOM05D001174 ORTHO05D001003 6.3e-07 57.8 44 52.3
SHI04348 Sapria himalayana HOM05D001174 ORTHO05D001003 6.3e-07 57.8 56 46.4
Mapoly0039s0094 Marchantia polymorpha HOM05D001174 ORTHO05D001003 1.1e-06 57.0 52 46.2
ATR0021G020 Amborella trichopoda HOM05D001174 ORTHO05D001003 1.4e-06 56.6 55 45.5
CBR_g139 Chara braunii HOM05D001174 ORTHO05D001003 1.4e-06 56.6 54 40.7
Pp3c9_20410 Physcomitrium patens HOM05D001174 ORTHO05D001003 1.4e-06 56.6 52 44.2
SHI30122 Sapria himalayana HOM05D001174 ORTHO05D001003 1.8e-06 56.2 55 40.0
Zm00001eb216130 Zea mays HOM05D001174 ORTHO05D001003 1.8e-06 56.2 51 49.0
AagrBONN_evm.TU.Sc2ySwM_362.680 Anthoceros agrestis HOM05D001174 ORTHO05D001003 3.1e-06 55.5 52 44.2
Cpa.g.sc2.163 Carica papaya HOM05D001174 ORTHO05D001003 3.1e-06 55.5 39 56.4
CSS0048326 Camellia sinensis var. sinensis HOM05D001174 ORTHO05D001003 4.1e-06 55.1 55 40.0
Carub.0005s0077 Capsella rubella HOM05D001174 ORTHO05D001003 4.1e-06 55.1 39 51.3
Atru.chr11.817 Acer truncatum HOM05D001174 ORTHO05D001003 9.1e-06 53.9 40 57.5
THA.LOC104824122 Tarenaya hassleriana HOM05D001174 ORTHO05D001003 9.1e-06 53.9 36 55.6


User provided reference genes

Program Settings