Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 0.0e+00 1250.3 639 100.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 0.0e+00 1174.5 640 95.2
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 0.0e+00 1152.5 640 93.4
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 0.0e+00 1142.5 640 92.5
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.6e-232 809.7 637 67.5
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.3e-231 805.8 642 66.0
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.2e-230 803.5 629 68.0
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 5.8e-230 801.2 616 68.2
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 2.9e-229 798.9 638 65.8
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 8.3e-229 797.3 638 65.7
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 7.3e-225 784.3 646 66.1
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 9.5e-225 783.9 637 65.6
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.1e-199 700.7 638 60.8
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 4.9e-189 665.2 605 65.5
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 3.6e-179 632.5 619 55.3
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 3.3e-177 625.9 652 53.2
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 2.8e-176 622.9 624 53.7
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 8.5e-173 611.3 621 53.0
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 8.5e-173 611.3 619 54.8
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.5e-169 600.5 621 53.3
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 5.0e-165 585.5 619 53.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.9e-164 583.6 619 52.0
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 3.9e-162 575.9 621 49.4
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.0e-161 573.5 620 51.1
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 3.7e-160 569.3 619 49.3
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 4.1e-159 565.8 624 50.2
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 7.0e-159 565.1 630 49.2
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.2e-158 564.3 622 50.5
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.6e-158 563.9 619 49.6
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.6e-158 563.1 624 48.4
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 3.8e-157 559.3 616 48.9
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.5e-156 557.4 613 49.1
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 3.0e-154 549.7 627 49.6
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.7e-152 543.9 618 46.8
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.7e-152 543.9 634 48.3
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 6.3e-152 542.0 617 49.3
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 8.2e-152 541.6 605 48.1
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 3.1e-151 539.7 628 49.0
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.0e-149 532.3 634 48.1
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.2e-147 527.7 643 46.7
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.8e-146 523.9 618 48.2
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.8e-146 523.9 625 49.0
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.3e-146 523.5 627 47.5
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 3.0e-146 523.1 580 50.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.5e-145 520.8 616 47.6
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 5.7e-145 518.8 616 46.1
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 7.5e-145 518.5 619 46.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 6.3e-144 515.4 619 46.0
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 4.1e-143 512.7 680 45.0
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 9.1e-143 511.5 616 48.1
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.0e-142 510.4 618 46.0
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.3e-141 507.7 615 45.2
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.8e-138 497.3 617 46.0
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 5.2e-138 495.7 627 45.6
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 6.8e-138 495.4 684 43.4
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.7e-136 490.7 645 44.0
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.4e-135 486.9 482 61.4
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.0e-130 471.5 682 41.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.4e-130 471.1 631 42.0
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 2.6e-129 466.8 617 42.3
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 1.4e-127 461.1 626 42.5
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.8e-127 460.7 610 45.2
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 2.0e-126 457.2 594 43.6
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.5e-126 456.4 630 44.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.0e-125 454.9 611 41.9
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 3.9e-125 453.0 461 50.8
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.3e-122 443.7 566 45.4
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 3.1e-122 443.4 634 41.8
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.9e-119 434.1 622 42.4
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.3e-116 423.3 624 41.5
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.1e-114 418.3 643 41.1
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.8e-114 417.5 621 41.1
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 5.4e-111 406.0 338 63.6
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.3e-109 400.6 574 41.5
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.5e-108 397.9 617 38.2
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.8e-106 391.0 632 39.4
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 2.6e-105 387.1 644 39.8
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 2.6e-105 387.1 668 38.9
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.3e-104 384.8 454 46.5
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.4e-103 381.3 631 38.8
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 4.1e-103 379.8 648 38.4
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 9.2e-103 378.6 378 53.2
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.3e-101 374.0 378 53.2
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 3.0e-101 373.6 439 45.3
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 3.9e-101 373.2 632 36.9
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 4.3e-100 369.8 651 37.8
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.7e-99 366.3 377 51.7
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.0e-98 363.2 378 52.6
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 5.8e-97 359.4 411 47.2
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 4.9e-96 356.3 527 41.7
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.7e-94 350.5 648 36.6
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.3e-93 347.4 522 41.6
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 2.5e-92 344.0 632 36.6
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 5.6e-92 342.8 549 38.1
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 4.8e-91 339.7 641 35.3
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.5e-89 334.7 661 34.3
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.6e-89 334.0 607 36.2
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.6e-83 314.7 645 34.0
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 3.1e-74 283.9 631 34.2
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 2.2e-67 261.2 448 38.2
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 4.3e-60 236.9 278 48.6
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 1.1e-58 232.3 290 45.9
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 7.2e-39 166.4 497 28.4
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.1e-34 152.5 551 27.6
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.6e-33 148.7 249 36.1
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 2.0e-33 148.3 298 33.6
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.7e-32 145.2 201 41.3
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.1e-31 142.5 90 78.9
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.6e-30 137.5 531 25.0
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 4.0e-29 134.0 631 24.6
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.1e-26 125.9 664 23.3
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 5.4e-26 123.6 132 54.5
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.1e-23 115.9 166 41.0
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 3.7e-19 100.9 191 35.1
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 3.8e-16 90.9 74 64.9
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 1.4e-10 72.4 98 45.9
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 1.6e-09 68.9 75 48.0
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.7e-08 65.5 108 39.8
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.9e-08 64.3 63 50.8
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 6.6e-08 63.5 54 57.4
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.1e-07 62.8 62 51.6
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 5.6e-07 60.5 130 33.8
MELO3C031505.2 Cucumis melo HOM05D006351 ORTHO05D007796 7.3e-07 60.1 78 42.3
Medtr1g012330 Medicago truncatula HOM05D008753 ORTHO05D010999 2.8e-06 58.2 54 63.0
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.6e-06 57.8 51 56.9


User provided reference genes

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