Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7A8JPA Arachis hypogaea HOM05D004333 ORTHO05D005363 2.5e-72 275.4 145 100.0
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 1.7e-52 209.5 122 91.8
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 2.9e-52 208.8 135 85.9
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 1.5e-48 196.4 135 77.8
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 5.6e-48 194.5 139 78.4
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 7.3e-48 194.1 122 83.6
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 9.6e-48 193.7 122 83.6
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 1.6e-47 193.0 135 77.8
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 2.1e-47 192.6 122 83.6
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 2.1e-47 192.6 135 79.3
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 3.6e-47 191.8 122 84.4
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 1.8e-46 189.5 122 81.1
Psat1g135480 Pisum sativum HOM05D004333 ORTHO05D005363 1.8e-46 189.5 129 76.0
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 2.4e-46 189.1 122 82.0
Psat4g066600 Pisum sativum HOM05D004333 ORTHO05D005363 3.4e-45 185.3 129 76.0
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 3.8e-44 181.8 122 77.9
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 3.5e-42 175.3 137 68.6
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 6.0e-42 174.5 122 73.8
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 6.0e-42 174.5 122 73.8
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 7.8e-42 174.1 131 73.3
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 1.7e-41 172.9 135 65.2
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 2.3e-41 172.6 122 72.1
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 3.9e-41 171.8 122 72.1
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 5.1e-41 171.4 131 71.8
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 6.6e-41 171.0 139 66.2
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 8.7e-41 170.6 122 71.3
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.7e-41 170.6 122 71.3
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.7e-41 170.6 122 71.3
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.7e-41 170.6 122 71.3
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.7e-41 170.6 122 71.3
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 8.7e-41 170.6 135 68.9
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 8.7e-41 170.6 139 68.3
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 1.1e-40 170.2 139 65.5
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 1.5e-40 169.9 122 71.3
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 1.5e-40 169.9 136 66.9
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.9e-40 169.5 122 71.3
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 1.9e-40 169.5 122 71.3
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 2.5e-40 169.1 122 69.7
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 4.3e-40 168.3 139 65.5
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 5.6e-40 167.9 137 67.9
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 5.6e-40 167.9 122 69.7
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 9.6e-40 167.2 122 70.5
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 9.6e-40 167.2 122 70.5
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 9.6e-40 167.2 136 66.9
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 1.3e-39 166.8 137 67.2
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 1.3e-39 166.8 135 66.7
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 1.6e-39 166.4 135 65.2
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 1.6e-39 166.4 135 65.2
Psat1g176920 Pisum sativum HOM05D004333 ORTHO05D005363 1.6e-39 166.4 99 83.8
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 2.1e-39 166.0 122 71.3
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 3.6e-39 165.2 122 72.1
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 4.8e-39 164.9 137 65.0
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 4.8e-39 164.9 122 68.9
Cpa.g.c29767.1 Carica papaya HOM05D004333 ORTHO05D005363 6.2e-39 164.5 131 64.9
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 8.1e-39 164.1 122 69.7
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.4e-38 163.3 137 65.0
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.8e-38 162.9 139 65.5
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 1.8e-38 162.9 131 65.6
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.4e-38 162.5 122 70.5
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 3.1e-38 162.2 108 76.9
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 3.1e-38 162.2 122 69.7
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 4.0e-38 161.8 120 66.7
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 4.0e-38 161.8 122 65.6
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 5.3e-38 161.4 135 65.2
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 6.9e-38 161.0 135 62.2
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 6.9e-38 161.0 109 71.6
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 6.9e-38 161.0 120 67.5
Solyc03g082680.4 Solanum lycopersicum HOM05D004333 ORTHO05D005363 1.2e-37 160.2 135 64.4
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 2.0e-37 159.5 120 65.8
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 2.6e-37 159.1 107 75.7
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 2.6e-37 159.1 120 70.0
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 3.4e-37 158.7 122 67.2
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 3.4e-37 158.7 137 62.8
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 4.5e-37 158.3 139 63.3
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 7.6e-37 157.5 137 62.0
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 7.6e-37 157.5 122 68.0
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 9.9e-37 157.1 120 69.2
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 1.7e-36 156.4 135 61.5
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 2.2e-36 156.0 137 61.3
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 2.2e-36 156.0 122 66.4
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 2.9e-36 155.6 133 63.2
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 3.8e-36 155.2 108 73.1
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 4.9e-36 154.8 138 62.3
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 8.4e-36 154.1 137 60.6
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 1.9e-35 152.9 120 64.2
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 3.2e-35 152.1 100 77.0
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 5.4e-35 151.4 137 59.1
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 5.4e-35 151.4 137 59.1
SEGI_24760 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 7.1e-35 151.0 122 63.9
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.1e-34 149.4 100 76.0
CAN.G481.60 Capsicum annuum HOM05D004333 ORTHO05D005363 2.7e-34 149.1 112 66.1
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 2.7e-34 149.1 107 67.3
CAN.G481.57 Capsicum annuum HOM05D004333 ORTHO05D005363 3.5e-34 148.7 98 72.4
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 3.5e-34 148.7 113 69.9
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 3.5e-34 148.7 113 69.9
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 4.6e-34 148.3 134 61.9
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 1.3e-33 146.7 135 55.6
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 1.8e-33 146.4 125 66.4
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 2.3e-33 146.0 137 57.7
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 2.3e-33 146.0 132 59.1
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 2.3e-33 146.0 132 59.1
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 3.9e-33 145.2 131 61.1
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 3.9e-33 145.2 129 59.7
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 5.1e-33 144.8 129 59.7
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 5.1e-33 144.8 137 57.7
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 8.7e-33 144.1 130 61.5
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 1.1e-32 143.7 129 59.7
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 1.5e-32 143.3 98 75.5
Oeu049088.1 Olea europaea HOM05D004333 ORTHO05D005363 1.1e-30 137.1 100 64.0
Psat1g176800 Pisum sativum HOM05D004029 ORTHO05D004613 1.1e-30 137.1 82 84.1
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 4.0e-30 135.2 123 57.7
SHI08278 Sapria himalayana HOM05D004333 ORTHO05D005363 6.4e-28 127.9 99 67.7
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 1.2e-26 123.6 99 63.6
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 1.9e-24 116.3 133 53.4
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 2.4e-22 109.4 137 50.4
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 3.1e-22 109.0 107 53.3
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 3.8e-20 102.1 132 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 5.5e-19 98.2 132 44.7
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 3.3e-16 89.0 107 43.0
COL.COLO4_19568 Corchorus olitorius HOM05D005366 ORTHO05D006323 9.7e-08 60.8 42 71.4


User provided reference genes

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