Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 1.9e-43 179.9 188 100.0
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 4.6e-42 175.3 188 97.9
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 9.0e-14 81.3 73 57.5
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.0e-13 80.1 73 56.2
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 3.4e-13 79.3 73 56.2
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 9.9e-13 77.8 73 53.4
Medtr2g094170 Medicago truncatula HOM05D004188 ORTHO05D004445 2.9e-12 76.3 72 55.6
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 4.9e-12 75.5 55 70.9
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 8.4e-12 74.7 66 59.1
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 1.4e-11 73.9 74 56.8
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.9e-11 73.6 68 58.8
Ca_01416_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 3.2e-11 72.8 73 57.5
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 3.2e-11 72.8 73 49.3
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 3.2e-11 72.8 61 62.3
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 4.2e-11 72.4 61 63.9
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 4.2e-11 72.4 74 52.7
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 5.4e-11 72.0 54 66.7
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 5.4e-11 72.0 74 52.7
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 5.4e-11 72.0 60 63.3
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 7.1e-11 71.6 69 58.0
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 7.1e-11 71.6 50 74.0
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 7.1e-11 71.6 59 61.0
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 9.3e-11 71.2 54 68.5
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 9.3e-11 71.2 68 58.8
Psat5g278280 Pisum sativum HOM05D004188 ORTHO05D004445 9.3e-11 71.2 73 52.1
TPR.G11601 Trifolium pratense HOM05D004188 ORTHO05D004445 9.3e-11 71.2 66 62.1
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 1.2e-10 70.9 51 70.6
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 1.2e-10 70.9 51 70.6
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 1.2e-10 70.9 74 58.1
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 1.6e-10 70.5 69 56.5
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 2.1e-10 70.1 71 54.9
VMungo1080G0149 Vigna mungo HOM05D004188 ORTHO05D004445 2.1e-10 70.1 61 63.9
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 2.7e-10 69.7 71 54.9
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 3.5e-10 69.3 54 66.7
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 3.5e-10 69.3 54 66.7
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 3.5e-10 69.3 54 66.7
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 3.5e-10 69.3 54 66.7
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 3.5e-10 69.3 54 66.7
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 3.5e-10 69.3 74 51.4
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 3.5e-10 69.3 73 49.3
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 3.5e-10 69.3 50 68.0
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 3.5e-10 69.3 71 53.5
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 4.6e-10 68.9 74 52.7
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 6.0e-10 68.6 50 70.0
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 7.9e-10 68.2 56 62.5
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 1.0e-09 67.8 46 69.6
Dinv32748 Davidia involucrata HOM05D004188 ORTHO05D004445 1.0e-09 67.8 65 56.9
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 1.3e-09 67.4 56 62.5
Migut.D02222 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.3e-09 67.4 59 64.4
Migut.D02278 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.3e-09 67.4 59 64.4
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 1.8e-09 67.0 55 63.6
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 1.8e-09 67.0 74 52.7
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 1.8e-09 67.0 74 52.7
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.3e-09 66.6 73 47.9
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 2.3e-09 66.6 54 66.7
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 2.3e-09 66.6 71 56.3
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 3.0e-09 66.2 73 53.4
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 3.9e-09 65.9 48 68.8
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 3.9e-09 65.9 74 52.7
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 3.9e-09 65.9 67 59.7
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 3.9e-09 65.9 74 52.7
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 5.1e-09 65.5 51 68.6
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 5.1e-09 65.5 51 68.6
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 5.1e-09 65.5 54 55.6
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 5.1e-09 65.5 44 72.7
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 6.7e-09 65.1 74 50.0
Phvul.005G135700 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 6.7e-09 65.1 61 55.7
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 6.7e-09 65.1 74 50.0
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 6.7e-09 65.1 74 52.7
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 8.7e-09 64.7 71 53.5
Lalb_Chr14g0374691 Lupinus albus HOM05D004188 ORTHO05D004445 8.7e-09 64.7 70 55.7
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 8.7e-09 64.7 48 68.8
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 1.1e-08 64.3 73 49.3
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 1.1e-08 64.3 44 72.7
Lj2g0024305 Lotus japonicus HOM05D004188 ORTHO05D004445 1.1e-08 64.3 57 52.6
Lj3g0014225 Lotus japonicus HOM05D004188 ORTHO05D004445 1.1e-08 64.3 74 52.7
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.1e-08 64.3 54 61.1
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 1.1e-08 64.3 71 52.1
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 1.1e-08 64.3 71 52.1
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 1.5e-08 63.9 74 51.4
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 1.5e-08 63.9 74 51.4
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea HOM05D004188 ORTHO05D004445 1.5e-08 63.9 48 62.5
CiPaw.13G112700 Carya illinoinensis HOM05D004188 ORTHO05D004445 1.5e-08 63.9 54 63.0
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 1.9e-08 63.5 67 52.2
CsaV3_1G012810 Cucumis sativus L. HOM05D004188 ORTHO05D004445 2.5e-08 63.2 74 48.6
Lalb_Chr22g0350231 Lupinus albus HOM05D004188 ORTHO05D004445 2.5e-08 63.2 61 57.4
CANSAT56G2191 Cannabis sativa HOM05D004188 ORTHO05D004445 3.3e-08 62.8 54 59.3
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 3.3e-08 62.8 49 71.4
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 3.3e-08 62.8 45 68.9
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 3.3e-08 62.8 56 53.6
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 3.3e-08 62.8 73 53.4
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 5.6e-08 62.0 71 50.7
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 5.6e-08 62.0 73 47.9
Solyc11g069390.1 Solanum lycopersicum HOM05D004188 ORTHO05D004445 5.6e-08 62.0 49 61.2
Ah.01g014350 Amaranthus hybridus HOM05D004188 ORTHO05D004445 7.4e-08 61.6 61 54.1
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 7.4e-08 61.6 54 57.4
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 7.4e-08 61.6 71 50.7
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 7.4e-08 61.6 45 66.7
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 7.4e-08 61.6 71 52.1
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 9.6e-08 61.2 54 57.4
Prupe.2G214100 Prunus persica HOM05D004188 ORTHO05D004445 1.3e-07 60.8 51 54.9
PSO384G1281 Papaver somniferum HOM05D004188 ORTHO05D004445 1.6e-07 60.5 41 68.3
Rhsim13G0094200 Rhododendron simsii HOM05D004188 ORTHO05D004445 1.6e-07 60.5 52 55.8
Mapoly0127s0007 Marchantia polymorpha HOM05D004188 ORTHO05D004445 2.8e-07 59.7 57 56.1
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 2.8e-07 59.7 51 60.8
Sopen11g028110 Solanum pennellii HOM05D004188 ORTHO05D004445 2.8e-07 59.7 49 59.2
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 3.7e-07 59.3 53 58.5
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 4.8e-07 58.9 71 46.5
PSO339G1636 Papaver somniferum HOM05D004188 ORTHO05D004445 4.8e-07 58.9 41 65.9
Peaxi162Scf00092g00152 Petunia axillaris HOM05D004188 ORTHO05D004445 4.8e-07 58.9 61 52.5
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 6.2e-07 58.5 42 61.9
Sc06g0010170 Simmondsia chinensis HOM05D004188 ORTHO05D004445 1.1e-06 57.8 55 56.4
THA.LOC104810856 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 1.1e-06 57.8 38 76.3
ECA248G2476 Erigeron canadensis HOM05D004188 ORTHO05D004445 1.4e-06 57.4 58 48.3
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 1.8e-06 57.0 56 53.6
Aa31LG4G14540 Aethionema arabicum HOM05D004188 ORTHO05D004445 2.4e-06 56.6 45 64.4
PSO063G5002 Papaver somniferum HOM05D011190 ORTHO05D004445 2.4e-06 56.6 74 47.3
PSO339G4510 Papaver somniferum HOM05D011190 ORTHO05D004445 2.4e-06 56.6 74 47.3
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 2.4e-06 56.6 68 48.5
DCAR_006440 Daucus carota HOM05D004188 ORTHO05D004445 3.1e-06 56.2 52 51.9
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 3.1e-06 56.2 51 58.8
Medtr3g049390 Medicago truncatula HOM05D004188 ORTHO05D004445 5.3e-06 55.5 54 55.6
C03p12760 Brassica napus HOM05D004188 ORTHO05D004445 6.9e-06 55.1 46 63.0
Aqoxy1G01243 Aquilegia oxysepala HOM05D004188 ORTHO05D004445 9.0e-06 54.7 58 53.4
QL08p056015 Quercus lobata HOM05D007562 ORTHO05D009721 9.0e-06 54.7 45 57.8


User provided reference genes

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