Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6MTV2V Arachis hypogaea HOM05D004552 ORTHO05D005501 3.8e-294 1014.2 558 100.0
arahy.Tifrunner.gnm1.ann1.URH0Q0 Arachis hypogaea HOM05D004552 ORTHO05D005501 2.0e-226 789.3 456 97.4
arahy.Tifrunner.gnm1.ann1.CZIV0N Arachis hypogaea HOM05D004552 ORTHO05D005501 2.1e-204 716.1 401 99.8
arahy.Tifrunner.gnm1.ann1.LN9G9C Arachis hypogaea HOM05D004552 ORTHO05D005501 1.1e-203 713.8 401 99.5
Ca_19605_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 1.3e-169 600.5 406 84.7
Ca_22379_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 1.1e-168 597.4 406 83.5
Lj3g0026232 Lotus japonicus HOM05D004552 ORTHO05D005501 7.2e-168 594.7 406 84.0
Lj5g0019559 Lotus japonicus HOM05D004552 ORTHO05D005501 2.1e-167 593.2 406 83.7
Lj4g0012826 Lotus japonicus HOM05D004552 ORTHO05D005501 6.7e-166 588.2 406 83.5
Medtr8g075790 Medicago truncatula HOM05D004552 ORTHO05D005501 9.7e-165 584.3 406 82.5
TPR.G33503 Trifolium pratense HOM05D004552 ORTHO05D005501 5.3e-163 578.6 406 80.5
Glyma.08G287300 Glycine max HOM05D004552 ORTHO05D005501 7.2e-160 568.2 403 82.1
Psat7g019080 Pisum sativum HOM05D004552 ORTHO05D005501 1.6e-159 567.0 425 77.6
Medtr6g089780 Medicago truncatula HOM05D004552 ORTHO05D005501 1.4e-158 563.9 405 79.3
Lalb_Chr05g0229841 Lupinus albus HOM05D004552 ORTHO05D005501 4.8e-156 555.4 405 79.3
Glyma.06G188800 Glycine max HOM05D004552 ORTHO05D005501 2.0e-154 550.1 405 80.2
arahy.Tifrunner.gnm1.ann1.52IM1F Arachis hypogaea HOM05D004552 ORTHO05D005501 3.5e-154 549.3 312 97.1
Glyma.13G067700 Glycine max HOM05D004552 ORTHO05D005501 1.9e-152 543.5 403 80.1
Phvul.003G261400 Phaseolus vulgaris HOM05D004552 ORTHO05D005501 3.2e-152 542.7 403 80.9
VMungo0251G2800 Vigna mungo HOM05D004552 ORTHO05D005501 5.2e-150 535.4 401 78.8
Lj6g0002066 Lotus japonicus HOM05D004552 ORTHO05D005501 2.7e-143 513.1 406 74.4
ClCG04G008790 Citrullus lanatus HOM05D004552 ORTHO05D005501 2.2e-137 493.4 409 70.7
TPR.G27980 Trifolium pratense HOM05D004552 ORTHO05D005501 2.7e-135 486.5 329 80.2
CiPaw.09G181100 Carya illinoinensis HOM05D004552 ORTHO05D005501 2.0e-133 480.3 415 72.3
MELO3C014263.2 Cucumis melo HOM05D004552 ORTHO05D005501 1.4e-131 474.2 409 68.9
CsaV3_4G024350 Cucumis sativus L. HOM05D004552 ORTHO05D005501 2.4e-131 473.4 406 69.5
Ciclev10011831m.g Citrus clementina HOM05D004552 ORTHO05D005501 5.4e-131 472.2 424 69.1
Thecc.05G052700 Theobroma cacao HOM05D004552 ORTHO05D005501 1.7e-129 467.2 423 69.3
Sed0010830 Sechium edule HOM05D004552 ORTHO05D005501 6.6e-129 465.3 409 68.5
Haze_20666 Corylus avellana HOM05D004552 ORTHO05D005501 1.1e-128 464.5 409 72.1
Psat4g100360 Pisum sativum HOM05D004552 ORTHO05D005501 1.1e-128 464.5 346 78.9
ClCG10G016170 Citrullus lanatus HOM05D004552 ORTHO05D005501 1.9e-128 463.8 397 69.0
TWI53G0358 Tripterygium wilfordii HOM05D004552 ORTHO05D005501 1.8e-126 457.2 425 67.5
Lj6g0013650 Lotus japonicus HOM05D004552 ORTHO05D005501 6.8e-126 455.3 406 69.5
Cfa017496 Carpinus fangiana HOM05D004552 ORTHO05D005501 3.4e-125 453.0 408 70.3
QL07p045485 Quercus lobata HOM05D004552 ORTHO05D005501 9.8e-125 451.4 413 67.1
Actinidia19722 Actinidia chinensis HOM05D004552 ORTHO05D005501 1.7e-124 450.7 410 69.0
RcHm_v2.0_Chr1g0361081 Rosa chinensis HOM05D004552 ORTHO05D005501 2.9e-124 449.9 413 68.8
Dinv37242 Davidia involucrata HOM05D004552 ORTHO05D005501 4.9e-124 449.1 412 69.2
Duzib106G1297 Durio zibethinus HOM05D004552 ORTHO05D005501 4.9e-124 449.1 417 67.9
PGR004G2024 Punica granatum HOM05D004552 ORTHO05D005501 4.9e-124 449.1 417 67.4
Atru.chr8.2543 Acer truncatum HOM05D004552 ORTHO05D005501 4.1e-123 446.0 425 65.6
Lj6g0014683 Lotus japonicus HOM05D004552 ORTHO05D005501 7.8e-122 441.8 364 72.3
RcHm_v2.0_Chr1g0360161 Rosa chinensis HOM05D004552 ORTHO05D005501 2.3e-121 440.3 410 65.4
CSS0033785 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 3.9e-121 439.5 408 68.1
TAR369G0596 Trochodendron aralioides HOM05D004552 ORTHO05D005501 5.0e-121 439.1 416 65.6
Prupe.2G197600 Prunus persica HOM05D004552 ORTHO05D005501 8.6e-121 438.3 410 66.8
Oeu029550.1 Olea europaea HOM05D004552 ORTHO05D005501 9.5e-120 434.9 409 69.2
THA.LOC104823245 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 1.2e-119 434.5 429 64.1
Hund08942 Selenicereus undatus HOM05D004552 ORTHO05D005501 3.6e-119 433.0 412 65.8
CANSAT56G3582 Cannabis sativa HOM05D004552 ORTHO05D005501 1.0e-118 431.4 402 67.4
Oeu026072.1 Olea europaea HOM05D004552 ORTHO05D005501 1.8e-118 430.6 407 68.8
Rhsim10G0168100 Rhododendron simsii HOM05D004552 ORTHO05D005501 4.0e-118 429.5 405 66.9
Rhsim11G0041500 Rhododendron simsii HOM05D004552 ORTHO05D005501 4.0e-118 429.5 405 66.9
Manes.09G079900 Manihot esculenta HOM05D004552 ORTHO05D005501 9.8e-117 424.9 409 63.1
Sp6g39730 Schrenkiella parvula HOM05D004552 ORTHO05D005501 1.7e-116 424.1 429 62.2
Cc00_g23990 Coffea canephora HOM05D004552 ORTHO05D005501 6.4e-116 422.2 409 67.2
Nitab4.5_0001952g0150 Nicotiana tabacum HOM05D004552 ORTHO05D005501 1.9e-115 420.6 406 67.5
MSTRG.16520 Avicennia marina HOM05D004552 ORTHO05D005501 2.4e-115 420.2 413 64.4
FvH4_7g16920 Fragaria vesca HOM05D004552 ORTHO05D005501 5.4e-115 419.1 406 63.5
Potri.016G084200 Populus trichocarpa HOM05D004552 ORTHO05D005501 5.4e-115 419.1 411 64.7
Nitab4.5_0008076g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 9.2e-115 418.3 408 65.4
FAN03G3426 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.0e-114 417.2 407 63.4
Rhsim11G0041800 Rhododendron simsii HOM05D004552 ORTHO05D005501 2.7e-114 416.8 403 65.8
FAN01G0370 Fragaria x ananassa HOM05D004552 ORTHO05D005501 3.5e-114 416.4 439 60.8
Thhalv10013588m.g Eutrema salsugineum HOM05D004552 ORTHO05D005501 4.6e-114 416.0 437 61.1
Nitab4.5_0005206g0040 Nicotiana tabacum HOM05D004552 ORTHO05D005501 6.0e-114 415.6 407 67.1
Manes.08G002200 Manihot esculenta HOM05D004552 ORTHO05D005501 7.8e-114 415.2 417 64.0
Solyc02g087180.4 Solanum lycopersicum HOM05D004552 ORTHO05D005501 2.3e-113 413.7 425 62.6
FAN06G4506 Fragaria x ananassa HOM05D004552 ORTHO05D005501 3.0e-113 413.3 406 63.1
Sopen02g031920 Solanum pennellii HOM05D004552 ORTHO05D005501 5.0e-113 412.5 404 64.6
Peaxi162Scf00569g00015 Petunia axillaris HOM05D004552 ORTHO05D005501 1.5e-112 411.0 406 64.0
EL10Ac7g16819 Beta vulgaris HOM05D004552 ORTHO05D005501 2.5e-112 410.2 416 61.5
Nitab4.5_0006780g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 4.3e-112 409.5 405 65.2
CARHR210480 Cardamine hirsuta HOM05D004552 ORTHO05D005501 5.6e-112 409.1 431 61.7
FvH4_7g17650 Fragaria vesca HOM05D004552 ORTHO05D005501 2.8e-111 406.8 407 63.4
CAN.G525.45 Capsicum annuum HOM05D004552 ORTHO05D005501 4.7e-111 406.0 409 63.8
DCAR_009290 Daucus carota HOM05D004552 ORTHO05D005501 1.1e-110 404.8 412 62.6
PSO210G6420 Papaver somniferum HOM05D004552 ORTHO05D005501 1.1e-110 404.8 419 61.6
AT5G02850 Arabidopsis thaliana HOM05D004552 ORTHO05D005501 1.4e-110 404.4 431 60.8
PSO832G0086 Papaver somniferum HOM05D004552 ORTHO05D005501 1.4e-110 404.4 420 61.7
AUR62025361 Chenopodium quinoa HOM05D004552 ORTHO05D005501 2.3e-110 403.7 414 62.1
FAN06G3324 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.3e-110 403.7 396 62.6
Nn1g07079 Nelumbo nucifera HOM05D004552 ORTHO05D005501 2.3e-110 403.7 429 60.6
Lsat_1_v5_gn_5_8941 Lactuca sativa HOM05D004552 ORTHO05D005501 3.1e-110 403.3 403 64.3
Gohir.A03G063400 Gossypium hirsutum HOM05D004552 ORTHO05D005501 1.5e-109 401.0 355 68.5
Gorai.003G108400 Gossypium raimondii HOM05D004552 ORTHO05D005501 5.8e-109 399.1 355 69.0
CAN.G206.55 Capsicum annuum HOM05D004552 ORTHO05D005501 1.3e-108 397.9 409 63.1
Gohir.D03G102900 Gossypium hirsutum HOM05D004552 ORTHO05D005501 1.7e-108 397.5 355 68.7
AUR62028362 Chenopodium quinoa HOM05D004552 ORTHO05D005501 4.9e-108 396.0 412 61.7
COL.COLO4_27097 Corchorus olitorius HOM05D004552 ORTHO05D005501 4.9e-108 396.0 341 70.7
A10p32880 Brassica napus HOM05D004552 ORTHO05D005501 8.3e-108 395.2 441 57.6
HanXRQChr05g0156781 Helianthus annuus HOM05D004552 ORTHO05D005501 1.4e-107 394.4 405 62.7
AL6G12120 Arabidopsis lyrata HOM05D004552 ORTHO05D005501 3.2e-107 393.3 433 59.4
C09p73810 Brassica napus HOM05D004552 ORTHO05D005501 3.2e-107 393.3 446 58.3
BolC9t60115H Brassica oleracea HOM05D004552 ORTHO05D005501 3.2e-107 393.3 446 58.3
Migut.K00511 Erythranthe guttata HOM05D004552 ORTHO05D005501 4.1e-107 392.9 409 62.1
Aa31LG1G22060 Aethionema arabicum HOM05D004552 ORTHO05D005501 5.4e-107 392.5 431 58.2
DCAR_002493 Daucus carota HOM05D004552 ORTHO05D005501 5.4e-107 392.5 412 61.2
BcaC06g32015 Brassica carinata HOM05D004552 ORTHO05D005501 7.1e-107 392.1 434 59.2
Solyc04g014240.1 Solanum lycopersicum HOM05D004552 ORTHO05D005501 2.7e-106 390.2 405 62.5
Ah.14g084480 Amaranthus hybridus HOM05D004552 ORTHO05D005501 4.6e-106 389.4 412 58.3
Carub.0006s0165 Capsella rubella HOM05D004552 ORTHO05D005501 6.0e-106 389.0 436 59.2
ECA246G2681 Erigeron canadensis HOM05D003206 ORTHO05D005207 3.0e-105 386.7 493 55.0
FAN06G0991 Fragaria x ananassa HOM05D004552 ORTHO05D005501 5.1e-105 386.0 402 61.9
Sopen04g006350 Solanum pennellii HOM05D004552 ORTHO05D005501 1.5e-104 384.4 405 62.0
SalBow4G1233 Salvia bowleyana HOM05D004552 ORTHO05D005501 4.3e-104 382.9 410 60.0
unitig_899.g15236 Utricularia gibba HOM05D004552 ORTHO05D005501 5.6e-104 382.5 408 61.8
FAN03G1811 Fragaria x ananassa HOM05D004552 ORTHO05D005501 3.6e-103 379.8 405 60.2
Sc07g0006230 Simmondsia chinensis HOM05D004552 ORTHO05D005501 6.8e-102 375.6 404 60.4
Aqoxy4G02198 Aquilegia oxysepala HOM05D004552 ORTHO05D005501 1.3e-100 371.3 430 57.4
PGSC0003DMG400000510 Solanum tuberosum HOM05D004552 ORTHO05D005501 8.4e-100 368.6 334 68.3
Manes.09G080009 Manihot esculenta HOM05D004552 ORTHO05D005501 1.6e-98 364.4 340 64.1
Cc03_g15870 Coffea canephora HOM05D004552 ORTHO05D005501 4.6e-98 362.8 406 62.6
Sabra16G0091200 Salix brachista HOM05D004552 ORTHO05D005501 8.1e-95 352.1 335 65.7
SGA_v2.0_scaffold204G41624 Striga asiatica HOM05D004552 ORTHO05D005501 2.9e-92 343.6 413 55.9
CDE04G3741 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 5.4e-91 339.3 402 55.7
SHI12593 Sapria himalayana HOM05D004552 ORTHO05D005501 6.0e-90 335.9 407 54.5
vmacro04719 Vaccinium macrocarpon HOM05D004552 ORTHO05D005501 3.9e-89 333.2 328 64.9
Eucgr.J03059 Eucalyptus grandis HOM05D004552 ORTHO05D005501 5.6e-88 329.3 441 52.8
MBI18_g25517_MAGBIO Magnolia biondii HOM05D004552 ORTHO05D005501 1.5e-85 321.2 347 60.5
PSO675G1725 Papaver somniferum HOM05D004552 ORTHO05D005501 1.6e-79 301.2 404 49.0
HPP92_012944 Vanilla planifolia HOM05D004552 ORTHO05D005501 1.4e-78 298.1 341 55.7
Os09g0540500 Oryza sativa ssp. japonica HOM05D004552 ORTHO05D005501 3.8e-76 290.0 422 48.1
SGA_v2.0_scaffold94G28661 Striga asiatica HOM05D004552 ORTHO05D005501 4.9e-76 289.7 344 57.3
Zm00001eb103820 Zea mays HOM05D004552 ORTHO05D005501 4.3e-72 276.6 410 46.6
FAN01G0473 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.3e-71 275.0 401 50.6
ATR0594G066 Amborella trichopoda HOM05D004552 ORTHO05D005501 3.8e-68 263.5 395 52.2
ATR0950G002 Amborella trichopoda HOM05D004552 ORTHO05D005501 1.4e-67 261.5 395 51.1
SEGI_01207 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 1.8e-62 244.6 414 45.9
RhsimUnG0119000 Rhododendron simsii HOM05D004552 ORTHO05D005501 3.4e-61 240.4 242 66.5
A03p00930 Brassica napus HOM05D004552 ORTHO05D005501 1.1e-54 218.8 213 60.6
CDE07G0444 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 6.9e-54 216.1 281 54.1
CSS0042772 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 3.2e-51 207.2 241 55.6
BcaB01g05872 Brassica carinata HOM05D004552 ORTHO05D005501 1.4e-49 201.8 293 48.1
THA.LOC104827455 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 8.8e-49 199.1 223 57.4
C03p01200 Brassica napus HOM05D004552 ORTHO05D005501 2.6e-45 187.6 266 53.8
BolC3t12680H Brassica oleracea HOM05D004552 ORTHO05D005501 2.6e-45 187.6 266 53.8
FvH4_6g20640 Fragaria vesca HOM05D004552 ORTHO05D005501 1.7e-44 184.9 250 51.6
FAN14G1867 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.7e-44 184.9 179 60.9
Mapoly0007s0084 Marchantia polymorpha HOM05D004552 ORTHO05D005501 1.6e-42 178.3 276 41.3
arahy.Tifrunner.gnm1.ann1.EC53M8 Arachis hypogaea HOM05D006423 ORTHO05D001299 1.8e-41 174.9 96 92.7
arahy.Tifrunner.gnm1.ann1.0EZ80L Arachis hypogaea HOM05D006763 ORTHO05D008659 3.9e-41 173.7 138 71.7
SEGI_11500 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 6.7e-41 172.9 321 46.1
Pp3c14_11490 Physcomitrium patens HOM05D004552 ORTHO05D005501 8.2e-39 166.0 382 39.5
arahy.Tifrunner.gnm1.ann1.Z65828 Arachis hypogaea HOM05D006423 ORTHO05D001299 1.1e-38 165.6 90 93.3
arahy.Tifrunner.gnm1.ann1.DBFW6U Arachis hypogaea HOM05D001801 ORTHO05D001739 2.4e-38 164.5 123 74.8
arahy.Tifrunner.gnm1.ann1.E9FA5X Arachis hypogaea HOM05D006423 ORTHO05D001299 3.1e-38 164.1 96 86.5
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea HOM05D006423 ORTHO05D008233 3.1e-38 164.1 92 91.3
arahy.Tifrunner.gnm1.ann1.12W07B Arachis hypogaea HOM05D004241 ORTHO05D001299 2.2e-36 157.9 130 67.7
arahy.Tifrunner.gnm1.ann1.DE57MX Arachis hypogaea HOM05D004241 ORTHO05D001299 5.0e-36 156.8 130 67.7
VMungo0647G0506 Vigna mungo HOM05D004552 ORTHO05D005501 1.5e-35 155.2 109 77.1
arahy.Tifrunner.gnm1.ann1.8Z2PYB Arachis hypogaea HOM05D001198 ORTHO05D001599 1.9e-35 154.8 93 87.1
arahy.Tifrunner.gnm1.ann1.7BQD9K Arachis hypogaea HOM05D006423 ORTHO05D001299 2.5e-35 154.5 90 86.7
arahy.Tifrunner.gnm1.ann1.Y37JRT Arachis hypogaea HOM05D002544 ORTHO05D007277 7.2e-35 152.9 91 84.6
AagrBONN_evm.TU.Sc2ySwM_362.1766 Anthoceros agrestis HOM05D004552 ORTHO05D005501 4.7e-34 150.2 392 35.7
BraA03t09475Z Brassica rapa HOM05D004552 ORTHO05D005501 5.2e-33 146.7 206 49.5
Actinidia11233 Actinidia chinensis HOM05D004552 ORTHO05D005501 3.1e-30 137.5 344 39.2
Lsat_1_v5_gn_8_95200 Lactuca sativa HOM05D004552 ORTHO05D005501 4.1e-30 137.1 105 74.3
BraA10t45325Z Brassica rapa HOM05D001414 ORTHO05D000619 1.9e-27 128.3 148 62.2
arahy.Tifrunner.gnm1.ann1.G5NZ7A Arachis hypogaea HOM05D003075 ORTHO05D003430 2.1e-26 124.8 64 98.4
PGSC0003DMG400023633 Solanum tuberosum HOM05D004552 ORTHO05D005501 1.2e-24 119.0 219 43.8
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 2.2e-23 114.8 85 74.1
arahy.Tifrunner.gnm1.ann1.V3V8ZQ Arachis hypogaea HOM05D006423 ORTHO05D001299 2.2e-23 114.8 85 74.1
CBR_g38095 Chara braunii HOM05D004552 ORTHO05D005501 2.8e-23 114.4 249 30.1
arahy.Tifrunner.gnm1.ann1.X539C7 Arachis hypogaea HOM05D000014 ORTHO05D000093 1.9e-19 101.7 64 82.8
arahy.Tifrunner.gnm1.ann1.IVXM4E Arachis hypogaea HOM05D002901 ORTHO05D003183 6.1e-18 96.7 51 96.1
arahy.Tifrunner.gnm1.ann1.T3IE7U Arachis hypogaea HOM05D005180 ORTHO05D006136 4.9e-15 87.0 51 88.2
AagrBONN_evm.TU.Sc2ySwM_344.2458 Anthoceros agrestis HOM05D004552 ORTHO05D005501 8.6e-12 76.3 225 27.6
Lj3E543T1 Lonicera japonica HOM05D004552 ORTHO05D005501 7.3e-11 73.2 121 53.7
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 2.3e-09 68.2 81 54.3
arahy.Tifrunner.gnm1.ann1.5U6P8X Arachis hypogaea HOM05D004552 ORTHO05D086381 1.2e-08 65.9 42 90.5
arahy.Tifrunner.gnm1.ann1.V9AGNQ Arachis hypogaea HOM05D004168 ORTHO05D003195 2.0e-08 65.1 83 53.0
MCO09G463 Micromonas commoda HOM05D004552 ORTHO05D005501 7.5e-08 63.2 117 38.5
arahy.Tifrunner.gnm1.ann1.TVNS6S Arachis hypogaea HOM05D004168 ORTHO05D004999 1.3e-07 62.4 83 51.8
arahy.Tifrunner.gnm1.ann1.Q00HW6 Arachis hypogaea HOM05D007893 ORTHO05D086814 3.2e-06 57.8 65 58.5
Lsat_1_v5_gn_8_95180 Lactuca sativa HOM05D004552 ORTHO05D005501 3.2e-06 57.8 63 54.0


User provided reference genes

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