Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.3e-235 819.3 404 100.0
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 3.9e-147 525.4 385 67.5
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.1e-146 523.9 385 66.5
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 5.2e-144 515.0 388 66.5
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 1.1e-138 497.3 395 62.5
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.5e-138 496.9 385 64.4
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.9e-133 479.9 397 58.9
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 5.4e-133 478.4 392 59.7
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 9.2e-133 477.6 392 59.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.6e-132 476.9 389 59.9
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 3.5e-132 475.7 392 59.4
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 7.8e-132 474.6 387 58.7
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 2.3e-131 473.0 386 59.1
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.0e-131 472.6 385 58.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 3.0e-131 472.6 385 58.7
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 3.9e-131 472.2 393 59.3
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 5.1e-131 471.9 385 58.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 6.6e-131 471.5 392 57.9
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 1.5e-130 470.3 385 58.4
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.9e-130 469.9 380 59.5
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.3e-130 469.2 392 57.7
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 9.6e-130 467.6 385 57.7
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.6e-129 466.8 399 56.4
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 4.7e-129 465.3 406 55.9
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 4.7e-129 465.3 385 56.9
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.2e-129 464.9 410 55.6
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 8.1e-129 464.5 398 57.5
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.1e-128 464.2 385 58.2
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 5.2e-128 461.8 386 58.0
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 5.2e-128 461.8 401 56.4
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 9.0e-128 461.1 385 62.1
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 9.0e-128 461.1 413 55.7
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 2.6e-127 459.5 386 57.3
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 3.4e-127 459.1 389 57.1
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 9.9e-127 457.6 398 56.8
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 1.3e-126 457.2 383 58.7
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.3e-126 457.2 389 56.8
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 2.9e-126 456.1 385 57.1
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.4e-125 453.8 401 55.4
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 2.4e-125 453.0 399 55.6
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 7.1e-125 451.4 393 55.0
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 4.6e-124 448.7 393 54.5
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 4.6e-124 448.7 393 54.5
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 4.6e-124 448.7 393 54.5
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 7.8e-124 448.0 393 54.5
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 7.8e-124 448.0 393 54.5
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 1.0e-123 447.6 385 54.5
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.0e-123 447.6 444 51.6
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.7e-123 446.8 389 57.6
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 3.0e-123 446.0 393 54.5
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 5.1e-123 445.3 383 55.6
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 5.1e-123 445.3 382 57.1
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.1e-122 444.1 391 55.5
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.5e-122 443.7 383 55.9
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.9e-122 443.4 383 55.9
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 9.6e-122 441.0 385 55.3
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 6.2e-121 438.3 392 53.6
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 2.4e-120 436.4 397 53.4
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 6.9e-120 434.9 385 55.6
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 9.0e-120 434.5 385 53.5
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 1.5e-119 433.7 450 50.0
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 9.9e-119 431.0 416 51.9
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 2.4e-117 426.4 399 54.1
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 4.2e-117 425.6 385 55.1
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 8.7e-115 417.9 386 53.1
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 1.9e-114 416.8 385 53.2
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 3.3e-114 416.0 385 51.9
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 1.3e-113 414.1 397 52.1
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.7e-113 412.5 385 55.6
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.7e-113 412.5 385 55.6
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.1e-113 411.4 385 52.7
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 4.0e-112 409.1 401 50.9
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.0e-111 406.8 388 53.1
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 7.6e-111 404.8 388 52.8
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 2.9e-110 402.9 400 51.0
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.3e-109 397.9 387 52.2
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 3.3e-106 389.4 393 49.9
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 9.6e-106 387.9 397 50.4
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 9.0e-104 381.3 355 53.5
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 7.6e-103 378.3 400 49.2
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.7e-102 377.1 385 49.9
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.3e-101 371.3 346 51.4
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 8.2e-97 358.2 379 46.7
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.3e-94 350.9 384 43.8
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 1.6e-92 344.0 308 55.2
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 3.7e-89 332.8 466 39.3
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 3.4e-87 326.2 403 40.7
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.7e-86 323.9 315 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 6.5e-86 322.0 404 42.3
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 7.2e-85 318.5 399 40.9
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.6e-82 310.1 416 44.0
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 6.7e-75 285.4 203 66.0
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 8.8e-75 285.0 393 38.4
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.8e-72 277.3 204 63.7
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 1.5e-69 267.7 152 88.2
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 2.5e-53 213.8 233 48.1
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 5.9e-47 192.6 139 61.2
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.6e-44 183.3 153 56.2
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.3e-38 164.9 135 57.0
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.1e-36 157.5 135 51.1
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 4.7e-36 156.4 125 57.6
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 4.7e-36 156.4 143 56.6
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-35 154.5 143 55.9
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-35 154.5 143 55.9
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 5.2e-35 152.9 143 55.9
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.4e-32 142.9 120 52.5
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.6e-31 141.4 98 69.4
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 3.0e-30 137.1 125 59.2
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 3.3e-29 133.7 135 47.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 3.1e-27 127.1 103 57.3
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 1.7e-25 121.3 75 72.0
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 7.8e-23 112.5 95 52.6
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 1.7e-22 111.3 59 81.4
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 3.9e-22 110.2 87 57.5
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.1e-21 108.6 88 53.4
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.5e-21 108.2 134 43.3
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-20 105.1 82 61.0
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 2.8e-20 104.0 80 58.8
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-17 95.1 61 65.6
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 1.3e-17 95.1 128 43.8
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.8e-17 93.6 76 53.9
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.8e-17 93.6 62 64.5
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 6.4e-17 92.8 75 54.7
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 1.1e-13 82.0 169 29.6
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.2e-10 72.0 51 66.7
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.5e-10 71.6 60 51.7
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.7e-09 68.2 60 55.0
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 2.2e-09 67.8 57 50.9
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.2e-08 63.9 65 47.7
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.1e-07 61.2 47 59.6
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 6.6e-06 56.2 50 56.0


User provided reference genes

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