Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.55GAEG Arachis hypogaea HOM05D000729 ORTHO05D023744 5.7e-80 300.8 149 100.0
arahy.Tifrunner.gnm1.ann1.VX11DM Arachis hypogaea HOM05D000729 ORTHO05D001063 2.6e-40 169.1 98 84.7
arahy.Tifrunner.gnm1.ann1.KE24QQ Arachis hypogaea HOM05D000729 ORTHO05D001063 1.2e-37 160.2 91 85.7
EL10As12g24040 Beta vulgaris HOM05D000729 ORTHO05D001063 2.2e-31 139.4 83 81.9
arahy.Tifrunner.gnm1.ann1.D45B89 Arachis hypogaea HOM05D000729 ORTHO05D001063 5.1e-28 128.3 98 67.3
SGA_v2.0_scaffold95G28824 Striga asiatica HOM05D000729 ORTHO05D001063 1.6e-26 123.2 84 76.2
arahy.Tifrunner.gnm1.ann1.X7XTN1 Arachis hypogaea HOM05D000729 ORTHO05D023744 4.9e-23 111.7 86 69.8
Gohir.A09G101260 Gossypium hirsutum HOM05D000729 ORTHO05D023744 6.4e-23 111.3 61 85.2
Nitab4.5_0006114g0050 Nicotiana tabacum HOM05D000729 ORTHO05D023744 3.1e-17 92.4 55 83.6
Sc03g0010040 Simmondsia chinensis HOM05D000729 ORTHO05D001063 5.8e-16 88.2 85 61.2
EL10As15g24105 Beta vulgaris HOM05D000729 ORTHO05D002596 2.4e-14 82.8 145 40.0
Solyc10g061887.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.1e-14 81.3 45 88.9
HanXRQChr00c0585g0576201 Helianthus annuus HOM05D000729 ORTHO05D001063 1.9e-11 73.2 46 82.6
Solyc11g021110.3 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.6e-10 70.1 84 51.2
SalBow5G1465 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.7e-10 68.9 76 56.6
HanXRQChr00c0634g0576581 Helianthus annuus HOM05D000729 ORTHO05D001063 4.0e-09 65.5 59 66.1
HanXRQChr00c0349g0574001 Helianthus annuus HOM05D000729 ORTHO05D001063 9.0e-09 64.3 46 76.1
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 9.0e-09 64.3 46 76.1
BolSC29t60627H Brassica oleracea HOM05D000729 ORTHO05D001063 1.2e-08 63.9 46 76.1
arahy.Tifrunner.gnm1.ann1.NIYG2M Arachis hypogaea HOM05D000729 ORTHO05D001063 4.5e-08 62.0 40 85.0
SGA_v2.0_scaffold137G35141 Striga asiatica HOM05D000729 ORTHO05D001063 1.1e-06 57.4 41 61.0
Nitab4.5_0018575g0020 Nicotiana tabacum HOM05D000729 ORTHO05D023744 2.4e-06 56.2 40 67.5
Nitab4.5_0027450g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 2.4e-06 56.2 99 41.4
Dinv01983 Davidia involucrata HOM05D000580 ORTHO05D001362 3.2e-06 55.8 34 76.5
SabraPtG0004000 Salix brachista HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_14555 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_16433 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_17520 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_19633 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_23649 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_23726 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
SEGI_28389 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 4.2e-06 55.5 34 76.5
Nitab4.5_0000684g0100 Nicotiana tabacum HOM05D000729 ORTHO05D001063 5.5e-06 55.1 87 44.8
Ah.10g027180 Amaranthus hybridus HOM05D000580 ORTHO05D001362 7.1e-06 54.7 33 78.8
Ah.10g027370 Amaranthus hybridus HOM05D000580 ORTHO05D001362 7.1e-06 54.7 33 78.8
Ah.10g027490 Amaranthus hybridus HOM05D000580 ORTHO05D001362 7.1e-06 54.7 33 78.8
Ah.10g028950 Amaranthus hybridus HOM05D000580 ORTHO05D001362 7.1e-06 54.7 33 78.8
arahy.Tifrunner.gnm1.ann1.0W708Z Arachis hypogaea HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
arahy.Tifrunner.gnm1.ann1.CA7A2G Arachis hypogaea HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
CARHR282190 Cardamine hirsuta HOM05D000580 ORTHO05D001362 7.1e-06 54.7 35 74.3
Lsat_1_v5_gn_3_45960 Lactuca sativa HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
Lsat_1_v5_gn_5_861 Lactuca sativa HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
Lsat_1_v5_gn_8_11001 Lactuca sativa HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
Lsat_1_v5_gn_9_51000 Lactuca sativa HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
PSO548G0100 Papaver somniferum HOM05D000580 ORTHO05D001362 7.1e-06 54.7 34 76.5
Prupe.7G029800 Prunus persica HOM05D000580 ORTHO05D001362 7.1e-06 54.7 36 69.4
Aqoxy23s001 Aquilegia oxysepala HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
CAN.G1478.4 Capsicum annuum HOM05D000580 ORTHO05D001362 9.3e-06 54.3 33 78.8
COL.COLO4_03185 Corchorus olitorius HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
COL.COLO4_31381 Corchorus olitorius HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Dinv33425 Davidia involucrata HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Dinv36886 Davidia involucrata HOM05D005342 ORTHO05D006925 9.3e-06 54.3 34 73.5
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Duzib252G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
ECA074G0003 Erigeron canadensis HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Eucgr.A00264 Eucalyptus grandis HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Gohir.1Z049666 Gossypium hirsutum HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Gohir.1Z078801 Gossypium hirsutum HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Gohir.A12G229100 Gossypium hirsutum HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Gohir.D01G102034 Gossypium hirsutum HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Gorai.003G087600 Gossypium raimondii HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Gorai.007G251900 Gossypium raimondii HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Lj2P1234T92 Lonicera japonica HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Lalb_Chr25g0283331 Lupinus albus HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Phvul.001G066100 Phaseolus vulgaris HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Potri.011G074868 Populus trichocarpa HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
Potri.011G113575 Populus trichocarpa HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
PGR111G0071 Punica granatum HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
RcHm_v2.0_CPg0501971 Rosa chinensis HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
TAR369G1069 Trochodendron aralioides HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5
vmacro22410 Vaccinium macrocarpon HOM05D000580 ORTHO05D001362 9.3e-06 54.3 34 73.5


User provided reference genes

Program Settings