Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 4.5e-135 484.6 241 100.0
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 5.4e-96 354.8 199 92.5
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 4.0e-59 232.3 160 74.4
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 3.4e-58 229.2 154 77.9
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 2.9e-57 226.1 152 75.7
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 1.9e-56 223.4 152 75.7
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 1.3e-54 217.2 151 74.8
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 3.9e-54 215.7 152 69.1
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 3.4e-50 202.6 152 70.4
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 4.5e-50 202.2 180 61.7
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 7.6e-50 201.4 156 67.9
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 1.3e-49 200.7 152 70.4
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 2.9e-49 199.5 152 69.1
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 2.9e-49 199.5 176 60.8
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 1.1e-48 197.6 152 69.7
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 1.1e-48 197.6 152 69.7
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 1.9e-48 196.8 152 67.8
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 2.5e-48 196.4 151 67.5
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 3.2e-48 196.1 156 66.7
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 4.2e-48 195.7 152 69.7
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 4.2e-48 195.7 152 69.1
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 5.5e-48 195.3 154 66.2
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 2.7e-47 193.0 166 62.0
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 3.5e-47 192.6 168 61.9
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 3.5e-47 192.6 164 62.8
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 4.6e-47 192.2 152 67.1
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.0e-46 191.0 156 66.0
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.3e-46 190.7 165 61.2
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 1.3e-46 190.7 153 66.7
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 3.0e-46 189.5 165 61.2
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 3.0e-46 189.5 152 64.5
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 5.1e-46 188.7 152 65.8
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 5.1e-46 188.7 152 64.5
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 6.7e-46 188.3 156 63.5
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 6.7e-46 188.3 156 63.5
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 1.5e-45 187.2 152 64.5
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 2.5e-45 186.4 157 61.1
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 2.5e-45 186.4 152 64.5
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 3.3e-45 186.0 152 62.5
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 5.7e-45 185.3 152 64.5
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 1.3e-44 184.1 153 63.4
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 1.3e-44 184.1 152 63.8
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 2.8e-44 183.0 153 64.7
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 3.7e-44 182.6 153 62.7
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 4.8e-44 182.2 189 55.6
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 6.3e-44 181.8 153 63.4
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 1.1e-43 181.0 156 61.5
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 1.4e-43 180.6 156 60.9
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.8e-43 180.3 162 56.8
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 4.1e-43 179.1 152 63.8
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 6.9e-43 178.3 152 63.8
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 6.9e-43 178.3 154 61.7
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 6.9e-43 178.3 170 58.2
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.2e-42 177.6 153 58.8
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 2.0e-42 176.8 153 59.5
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 4.5e-42 175.6 170 55.3
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 1.7e-41 173.7 166 57.8
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.2e-41 173.3 152 59.9
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 2.2e-41 173.3 187 52.9
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.8e-41 172.6 157 58.0
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 1.4e-40 170.6 152 61.8
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 1.9e-40 170.2 152 60.5
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 1.9e-40 170.2 152 59.9
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 1.9e-40 170.2 152 59.9
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 2.1e-39 166.8 152 59.9
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 4.6e-39 165.6 162 55.6
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 7.9e-39 164.9 152 58.6
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 1.8e-38 163.7 159 54.7
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 2.3e-38 163.3 152 57.9
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 3.0e-38 162.9 153 56.2
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 3.9e-38 162.5 162 54.9
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 5.1e-38 162.2 163 54.6
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 6.7e-38 161.8 152 58.6
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 8.7e-38 161.4 153 56.9
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 8.7e-38 161.4 153 56.9
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 8.7e-38 161.4 153 57.5
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 1.5e-37 160.6 176 51.7
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 1.9e-37 160.2 156 55.1
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 1.9e-37 160.2 156 55.1
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 4.3e-37 159.1 152 56.6
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 5.7e-37 158.7 151 58.9
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 7.4e-37 158.3 135 60.0
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.6e-36 157.1 135 59.3
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 1.6e-36 157.1 121 67.8
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.2e-36 156.8 152 56.6
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 2.8e-36 156.4 135 60.0
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 2.8e-36 156.4 135 60.0
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 2.8e-36 156.4 135 60.0
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 2.8e-36 156.4 152 55.3
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 3.7e-36 156.0 152 55.9
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 6.3e-36 155.2 152 55.3
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 3.1e-35 152.9 133 57.1
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 5.3e-35 152.1 135 59.3
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 1.7e-33 147.1 113 68.1
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 2.9e-33 146.4 155 54.2
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 3.8e-33 146.0 152 54.6
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 3.8e-33 146.0 139 57.6
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 2.2e-28 130.2 165 46.1
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 3.7e-28 129.4 165 46.1
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 6.3e-28 128.6 107 66.4
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 3.4e-26 122.9 106 59.4
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-24 117.5 160 41.2
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.1e-23 113.6 162 38.3
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-22 110.5 193 36.8
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 6.7e-22 108.6 164 38.4
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 6.7e-22 108.6 106 53.8
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 7.4e-21 105.1 106 53.8
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 9.7e-21 104.8 162 40.1
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-20 104.4 158 40.5
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 1.3e-20 104.4 70 75.7
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-19 101.3 122 43.4
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-19 100.5 158 39.9
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-19 99.8 184 37.5
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-18 97.4 169 34.9
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 7.7e-18 95.1 94 52.1
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-17 93.6 161 38.5
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 2.9e-17 93.2 144 33.3
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 6.5e-17 92.0 148 38.5
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 3.2e-16 89.7 162 34.6
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 7.2e-16 88.6 141 39.7
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 1.2e-15 87.8 69 66.7
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-14 84.7 133 39.1
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 5.2e-14 82.4 60 68.3
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-13 79.7 132 36.4
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-12 75.9 133 37.6
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 6.3e-12 75.5 129 34.9
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 8.2e-12 75.1 137 34.3
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 8.2e-12 75.1 101 41.6
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 5.3e-11 72.4 122 32.8
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 7.0e-11 72.0 68 57.4
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-10 71.2 142 32.4
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-10 70.9 125 32.0
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-10 70.9 119 35.3
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-10 70.1 131 33.6
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-10 69.7 133 33.8
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 7.7e-10 68.6 141 31.2
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 7.7e-10 68.6 170 28.8
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.2e-09 67.0 134 30.6
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 5.0e-09 65.9 113 37.2
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 5.0e-09 65.9 104 35.6
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-08 64.3 133 27.1
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.5e-08 64.3 102 39.2
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-08 63.9 121 32.2
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-07 61.2 158 27.8
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 8.0e-07 58.5 103 37.9
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 2.3e-06 57.0 116 29.3
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 4.0e-06 56.2 111 30.6
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 5.2e-06 55.8 133 27.8


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