Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 3.5e-194 681.4 339 100.0
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 1.3e-188 662.9 339 98.2
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 1.3e-177 626.3 318 98.1
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 3.9e-177 624.8 318 97.8
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 2.7e-146 522.3 333 77.5
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 1.8e-142 509.6 331 77.0
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 2.7e-141 505.8 331 76.7
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 8.6e-140 500.7 332 76.8
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 2.1e-138 496.1 333 75.1
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 7.5e-136 487.6 335 73.4
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 2.7e-133 479.2 317 76.0
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 2.5e-131 472.6 321 73.8
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.0e-129 467.2 341 69.5
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 2.0e-128 463.0 348 68.1
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 7.0e-126 454.5 337 68.8
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 3.5e-125 452.2 337 66.8
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 1.3e-124 450.3 335 68.7
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.9e-124 448.7 338 67.8
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.9e-124 448.7 338 67.8
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 8.6e-124 447.6 338 66.6
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 2.5e-123 446.0 339 66.4
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 7.3e-123 444.5 338 65.4
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 3.6e-122 442.2 332 66.6
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 3.6e-122 442.2 342 67.5
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 3.6e-122 442.2 318 69.2
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 6.2e-122 441.4 341 66.6
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 1.1e-121 440.7 326 69.3
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 1.4e-121 440.3 319 68.0
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.4e-121 440.3 340 65.9
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 1.5e-120 436.8 342 64.9
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.6e-120 436.0 317 68.1
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.3e-119 433.7 327 66.4
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 1.3e-119 433.7 333 65.8
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.2e-119 433.0 332 66.0
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 2.9e-119 432.6 340 65.0
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 6.4e-119 431.4 335 63.0
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 6.4e-119 431.4 319 68.0
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 1.9e-118 429.9 338 64.8
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 2.4e-118 429.5 323 67.5
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 2.4e-118 429.5 336 64.9
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 7.0e-118 427.9 334 66.2
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.2e-117 427.2 340 64.1
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.6e-117 426.8 339 65.2
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.6e-117 426.8 339 64.0
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 3.5e-117 425.6 323 66.6
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 7.8e-117 424.5 336 61.9
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 1.0e-116 424.1 339 62.8
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 2.3e-116 422.9 339 61.9
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 3.0e-116 422.5 334 65.6
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.9e-115 419.9 331 63.4
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 3.3e-115 419.1 343 62.4
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 3.3e-115 419.1 323 66.3
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 4.3e-115 418.7 323 64.7
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 4.3e-115 418.7 328 64.9
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 4.3e-115 418.7 327 65.1
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 4.3e-115 418.7 345 62.3
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 4.3e-115 418.7 331 62.8
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 5.6e-115 418.3 326 64.7
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 7.3e-115 417.9 345 62.3
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 7.3e-115 417.9 335 63.0
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 1.2e-114 417.2 326 64.1
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 1.2e-114 417.2 339 64.0
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 1.2e-114 417.2 320 65.6
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 1.6e-114 416.8 336 63.4
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 1.6e-114 416.8 339 63.4
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 2.1e-114 416.4 331 62.5
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 2.1e-114 416.4 331 62.2
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 3.6e-114 415.6 336 63.1
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 3.6e-114 415.6 326 63.8
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 3.6e-114 415.6 332 63.6
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 4.7e-114 415.2 326 63.8
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 4.7e-114 415.2 343 62.1
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 4.7e-114 415.2 317 65.0
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 8.1e-114 414.5 345 62.0
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 1.1e-113 414.1 326 63.8
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.8e-113 413.3 326 64.7
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 1.8e-113 413.3 326 63.8
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.1e-113 412.5 320 64.1
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.1e-113 412.5 320 64.4
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 3.4e-112 409.1 317 64.0
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 3.4e-112 409.1 320 63.8
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 7.5e-112 407.9 317 66.2
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.5e-112 407.9 320 64.1
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.3e-111 407.1 320 63.8
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 1.3e-111 407.1 322 64.6
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 1.7e-111 406.8 320 63.8
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 2.2e-111 406.4 338 63.6
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 3.7e-111 405.6 326 62.6
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 4.9e-111 405.2 334 63.5
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.9e-111 405.2 320 63.8
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 8.3e-111 404.4 326 62.3
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 5.4e-110 401.7 324 62.0
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.2e-109 400.6 355 58.6
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.7e-109 399.4 334 64.1
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 7.8e-109 397.9 322 62.1
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 1.5e-107 393.7 329 59.6
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 1.5e-107 393.7 329 59.6
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 7.3e-107 391.3 337 61.1
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 1.5e-104 383.6 322 59.6
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.0e-104 383.3 262 70.6
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 7.1e-102 374.8 324 60.8
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.2e-101 374.0 326 60.1
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.7e-101 372.9 327 59.0
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 6.0e-101 371.7 334 56.9
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 6.0e-101 371.7 317 60.3
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.3e-100 370.5 324 59.9
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 3.3e-99 365.9 319 57.4
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 5.4e-94 348.6 319 58.3
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 6.0e-93 345.1 287 58.5
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.5e-91 339.7 330 56.7
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.6e-80 303.1 253 61.3
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 9.9e-80 301.2 322 46.9
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 1.7e-79 300.4 352 44.0
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 3.7e-66 256.1 254 55.5
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 2.4e-65 253.4 337 39.5
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 3.3e-59 233.0 222 51.8
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 5.9e-56 222.2 170 63.5
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 1.3e-55 221.1 318 40.3
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 1.9e-54 217.2 170 62.4
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 7.9e-53 211.8 150 67.3
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.6e-51 206.8 165 62.4
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 3.1e-49 199.9 159 63.5
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 2.9e-47 193.4 287 37.6
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 1.7e-42 177.6 135 65.9
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 5.9e-40 169.1 136 64.0
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 2.0e-35 154.1 122 64.8
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 2.8e-34 150.2 100 72.0
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 1.8e-33 147.5 102 71.6
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 3.1e-33 146.7 101 72.3
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 7.0e-33 145.6 101 71.3
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 2.7e-32 143.7 99 71.7
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 5.9e-32 142.5 134 56.7
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 3.2e-30 136.7 129 58.1
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 1.6e-29 134.4 102 63.7
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 2.1e-29 134.0 95 62.1
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 4.7e-29 132.9 206 37.4
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 6.1e-29 132.5 129 52.7
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 1.4e-28 131.3 102 62.7
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 1.4e-28 131.3 262 31.3
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 3.4e-27 126.7 342 27.8
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 9.8e-27 125.2 165 39.4
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 9.8e-27 125.2 198 42.9
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 6.3e-26 122.5 172 40.1
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 9.1e-25 118.6 113 52.2
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 3.5e-24 116.7 96 61.5
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 3.5e-24 116.7 96 61.5
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 6.6e-23 112.5 99 55.6
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.9e-22 110.9 156 39.1
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 5.9e-16 89.4 145 42.1
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 9.5e-14 82.0 123 44.7
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 6.1e-13 79.3 125 41.6
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 6.4e-10 69.3 49 69.4
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 5.4e-09 66.2 45 71.1
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 5.0e-07 59.7 146 37.7
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.5e-06 58.2 39 69.2


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