Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 2.9e-154 548.5 278 100.0
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 1.1e-113 413.7 238 89.9
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 1.6e-112 409.8 238 89.5
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 4.0e-87 325.5 240 70.4
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 9.9e-86 320.9 239 71.5
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 3.8e-85 318.9 242 69.8
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 4.9e-85 318.5 238 71.0
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 6.4e-85 318.2 239 71.5
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 1.1e-84 317.4 238 71.0
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 3.2e-84 315.8 249 69.1
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 2.7e-83 312.8 238 71.8
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.0e-82 310.8 241 69.7
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.0e-82 310.8 241 69.7
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 1.8e-82 310.1 240 69.2
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 3.0e-82 309.3 243 69.5
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.1e-81 307.4 243 69.1
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 1.1e-81 307.4 241 68.9
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 4.3e-81 305.4 240 66.2
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 1.6e-80 303.5 238 68.1
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.6e-80 303.5 240 68.8
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 1.6e-80 303.5 241 66.8
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 2.1e-80 303.1 244 67.2
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 3.7e-80 302.4 242 66.9
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 4.8e-80 302.0 247 68.4
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 1.8e-79 300.1 240 66.2
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 1.8e-79 300.1 240 66.2
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.8e-79 300.1 244 65.2
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 2.4e-79 299.7 241 67.2
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 2.4e-79 299.7 248 66.1
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 2.4e-79 299.7 241 66.4
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 3.1e-79 299.3 250 66.0
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 5.3e-79 298.5 242 66.1
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 9.0e-79 297.7 242 66.1
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 2.0e-78 296.6 239 63.6
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 3.4e-78 295.8 238 67.2
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 5.8e-78 295.0 243 67.9
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 7.6e-78 294.7 241 63.5
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 1.0e-77 294.3 241 66.4
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 1.3e-77 293.9 240 67.1
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 2.9e-77 292.7 241 66.0
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 3.8e-77 292.4 240 67.5
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 3.8e-77 292.4 245 63.7
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 4.9e-77 292.0 238 65.5
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 4.9e-77 292.0 244 65.6
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 4.9e-77 292.0 244 65.6
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 4.9e-77 292.0 244 64.3
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 4.9e-77 292.0 245 66.9
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 4.9e-77 292.0 239 64.9
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 6.5e-77 291.6 243 64.6
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 8.4e-77 291.2 245 66.1
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 1.1e-76 290.8 240 66.2
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 1.1e-76 290.8 242 62.4
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 1.4e-76 290.4 244 66.0
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 1.4e-76 290.4 238 66.0
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 1.4e-76 290.4 245 63.3
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 1.4e-76 290.4 241 63.9
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 1.9e-76 290.0 245 63.7
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 2.5e-76 289.7 239 66.1
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 2.5e-76 289.7 239 66.1
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 3.2e-76 289.3 244 64.8
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 3.2e-76 289.3 240 65.0
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 4.2e-76 288.9 245 62.9
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 5.5e-76 288.5 241 63.1
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 7.1e-76 288.1 245 63.7
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 7.1e-76 288.1 245 63.7
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 1.2e-75 287.3 245 62.4
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 1.2e-75 287.3 245 63.3
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 1.6e-75 287.0 240 65.0
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 1.6e-75 287.0 242 66.1
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 1.6e-75 287.0 243 62.6
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 2.1e-75 286.6 243 63.4
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 2.7e-75 286.2 244 64.8
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 2.7e-75 286.2 245 62.4
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 2.7e-75 286.2 243 64.2
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 2.7e-75 286.2 245 62.4
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 2.7e-75 286.2 240 65.8
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 3.5e-75 285.8 242 65.7
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 3.5e-75 285.8 250 64.4
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 4.6e-75 285.4 240 63.3
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 4.6e-75 285.4 244 65.6
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 4.6e-75 285.4 243 63.4
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 4.6e-75 285.4 240 65.4
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 6.0e-75 285.0 243 64.2
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 6.0e-75 285.0 240 65.4
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 1.0e-74 284.3 244 64.8
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 1.0e-74 284.3 243 63.8
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 1.3e-74 283.9 241 66.0
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.3e-74 283.9 244 61.5
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 2.3e-74 283.1 239 63.6
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 3.0e-74 282.7 243 63.8
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 5.1e-74 282.0 245 62.0
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 5.1e-74 282.0 239 64.0
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 1.1e-73 280.8 239 64.9
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 1.1e-73 280.8 245 64.9
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 1.9e-73 280.0 239 64.4
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 2.5e-73 279.6 245 61.6
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 3.3e-73 279.3 244 64.3
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 4.3e-73 278.9 246 64.2
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 2.2e-72 276.6 244 63.5
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 2.8e-72 276.2 244 61.5
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 3.7e-72 275.8 238 60.9
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 4.8e-72 275.4 252 60.3
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 1.4e-71 273.9 240 63.3
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 6.9e-71 271.6 240 62.5
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.2e-70 270.8 244 58.6
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 1.2e-70 270.8 240 61.7
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 1.5e-70 270.4 240 63.3
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 2.0e-70 270.0 240 62.9
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 2.6e-70 269.6 247 60.3
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 2.6e-70 269.6 247 61.9
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 5.9e-70 268.5 239 64.0
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 6.5e-69 265.0 260 55.0
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.9e-68 263.5 239 63.6
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 3.0e-66 256.1 253 58.5
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 3.9e-66 255.8 239 60.3
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 5.7e-65 251.9 250 56.8
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.3e-64 250.8 240 57.9
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 2.8e-64 249.6 244 56.1
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 1.5e-62 243.8 254 54.7
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 1.5e-62 243.8 241 56.0
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 3.4e-62 242.7 239 57.3
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 4.5e-62 242.3 242 55.8
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 6.5e-61 238.4 218 59.6
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 9.7e-57 224.6 248 53.6
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 3.7e-56 222.6 243 53.5
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 3.7e-56 222.6 251 48.6
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 4.8e-56 222.2 246 50.8
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 4.8e-56 222.2 244 52.5
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 1.8e-55 220.3 252 48.0
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 2.4e-55 219.9 251 49.0
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 3.1e-55 219.5 232 60.3
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 4.1e-55 219.2 245 52.2
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 1.2e-54 217.6 243 52.7
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 3.5e-54 216.1 243 52.3
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 5.9e-54 215.3 250 49.2
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 1.6e-51 207.2 248 48.0
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 6.1e-51 205.3 246 50.8
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 3.9e-50 202.6 200 51.0
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.1e-49 201.1 200 58.5
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 2.0e-49 200.3 248 47.6
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 4.8e-48 195.7 268 44.8
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 6.3e-48 195.3 255 49.4
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 1.8e-47 193.7 267 44.6
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 1.8e-47 193.7 240 49.2
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 2.4e-47 193.4 240 49.2
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 2.4e-47 193.4 268 43.7
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 9.1e-47 191.4 259 45.2
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 5.9e-46 188.7 243 47.3
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 9.4e-44 181.4 243 44.0
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.1e-39 167.9 246 45.1
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 1.3e-37 161.0 237 42.6
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 1.2e-35 154.5 143 58.7
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 1.8e-31 140.6 94 70.2
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 7.7e-30 135.2 88 73.9
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 6.6e-21 105.5 175 40.6
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 6.6e-21 105.5 175 40.6
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 6.6e-21 105.5 175 40.6
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 8.0e-19 98.6 97 59.8
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 9.2e-15 85.1 71 66.2
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.3e-13 80.5 74 54.1
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.3e-13 80.5 74 54.1
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 3.3e-12 76.6 69 56.5
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 3.3e-12 76.6 69 56.5
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 3.3e-12 76.6 69 56.5
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.1e-10 71.6 50 68.0
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 6.8e-10 68.9 117 40.2
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 8.9e-10 68.6 35 88.6
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 2.0e-09 67.4 86 50.0
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 7.5e-09 65.5 35 85.7
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 1.7e-08 64.3 56 55.4
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 8.3e-08 62.0 35 80.0
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 1.9e-07 60.8 30 86.7
FAN21G3810 Fragaria x ananassa HOM05D003673 ORTHO05D025527 2.4e-07 60.5 102 40.2
FAN10G3644 Fragaria x ananassa HOM05D003673 ORTHO05D025527 4.1e-07 59.7 102 41.2
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 1.2e-06 58.2 43 67.4
FAN18G2996 Fragaria x ananassa HOM05D003673 ORTHO05D025527 2.7e-06 57.0 102 39.2


User provided reference genes

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