Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 7.3e-209 730.3 372 100.0
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 3.1e-207 724.9 372 99.2
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 1.4e-164 583.2 371 80.9
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 1.9e-164 582.8 372 79.3
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 3.2e-164 582.0 372 79.3
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 5.5e-164 581.3 373 79.9
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 1.0e-162 577.0 372 78.8
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.9e-161 572.8 373 79.9
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 2.1e-160 569.3 374 79.9
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 8.2e-160 567.4 373 78.8
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 2.4e-159 565.8 374 79.1
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 3.2e-156 555.4 400 72.8
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 1.1e-151 540.4 372 71.8
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 2.4e-151 539.3 372 72.6
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 1.3e-149 533.5 359 73.0
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 2.2e-149 532.7 359 73.3
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 1.9e-148 529.6 360 73.9
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.2e-147 526.9 359 73.0
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 3.6e-147 525.4 361 71.5
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 6.1e-147 524.6 365 72.3
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 6.7e-146 521.2 359 70.8
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 8.8e-146 520.8 372 68.3
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 2.6e-145 519.2 372 69.9
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 9.7e-145 517.3 369 70.5
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.8e-143 513.1 368 69.3
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.8e-143 513.1 363 70.8
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 3.4e-142 508.8 363 68.6
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 1.7e-141 506.5 369 67.5
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 5.0e-141 505.0 374 69.0
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 5.0e-141 505.0 364 69.5
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 1.1e-140 503.8 358 70.4
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 1.2e-139 500.4 372 66.9
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.6e-139 498.8 363 67.2
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 6.1e-139 498.0 374 69.0
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.0e-138 497.3 350 68.9
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.4e-138 496.9 361 69.5
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 1.8e-138 496.5 377 67.6
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 3.0e-138 495.7 379 67.5
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 5.2e-138 495.0 363 68.0
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 8.8e-138 494.2 353 67.1
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 2.0e-137 493.0 353 66.9
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 2.0e-137 493.0 371 66.6
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 2.6e-137 492.7 364 67.3
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 3.3e-137 492.3 371 64.7
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 5.7e-137 491.5 367 67.8
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.3e-136 490.3 361 68.7
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 3.7e-136 488.8 361 68.4
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 8.2e-136 487.6 353 65.7
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 1.4e-135 486.9 353 66.0
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.8e-135 486.5 361 68.4
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 2.6e-134 482.6 358 64.5
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 4.5e-134 481.9 365 63.8
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 1.7e-133 479.9 372 65.3
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 3.8e-133 478.8 365 63.8
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 3.8e-133 478.8 351 64.7
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 3.2e-132 475.7 353 65.4
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 3.2e-132 475.7 353 65.4
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 1.2e-131 473.8 367 63.8
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 2.7e-131 472.6 361 65.1
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 4.7e-131 471.9 369 63.7
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 2.6e-129 466.1 369 64.8
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 8.2e-128 461.1 361 64.8
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.4e-127 460.3 373 64.3
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 1.8e-127 459.9 366 64.2
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 1.7e-125 453.4 363 62.8
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 1.9e-124 449.9 384 61.7
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 3.6e-123 445.7 359 63.8
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 6.1e-123 444.9 372 62.1
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 1.0e-122 444.1 365 61.9
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 1.0e-122 444.1 377 61.0
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 3.4e-121 439.1 371 62.3
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 3.4e-121 439.1 375 61.1
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 9.8e-121 437.6 368 62.5
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 1.7e-120 436.8 349 63.9
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 1.1e-119 434.1 371 60.1
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 1.1e-119 434.1 364 61.0
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 1.8e-119 433.3 350 64.6
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 1.8e-119 433.3 364 61.3
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 3.1e-119 432.6 351 61.8
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 1.6e-118 430.3 351 61.5
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 1.6e-118 430.3 361 60.7
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 2.0e-118 429.9 364 60.2
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 1.5e-116 423.7 373 58.7
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 1.9e-116 423.3 377 59.2
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 9.8e-113 411.0 365 58.4
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 5.4e-111 405.2 340 60.0
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 7.0e-111 404.8 360 56.7
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 5.9e-110 401.7 369 59.9
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 1.0e-109 401.0 374 58.0
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 6.1e-107 391.7 367 57.2
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 1.2e-105 387.5 310 61.0
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 5.4e-103 378.6 363 57.3
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 1.6e-102 377.1 367 56.1
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.6e-102 377.1 301 60.8
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 1.7e-101 373.6 359 55.2
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 6.6e-101 371.7 365 55.3
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 9.5e-100 367.9 486 42.0
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 2.3e-98 363.2 304 61.5
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 5.2e-98 362.1 371 53.9
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.9e-84 317.0 567 34.4
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 9.5e-84 314.7 370 48.6
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 4.3e-76 289.3 368 42.9
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 4.9e-72 275.8 206 66.0
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 1.9e-71 273.9 406 38.2
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 3.2e-71 273.1 436 37.8
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 4.6e-70 269.2 285 51.9
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.3e-69 267.7 409 36.9
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.5e-68 263.5 409 36.9
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 3.3e-68 263.1 343 45.8
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 7.4e-60 235.3 164 69.5
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 1.3e-59 234.6 162 70.4
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 2.1e-59 233.8 154 75.3
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.2e-56 223.8 407 31.9
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.6e-54 217.6 407 32.4
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 1.4e-47 194.5 181 57.5
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 1.9e-47 194.1 114 81.6
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 9.3e-39 165.2 105 80.0
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 3.6e-38 163.3 265 36.6
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 2.2e-32 144.1 131 58.8
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 8.2e-27 125.6 115 53.0
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 5.0e-16 89.7 73 65.8
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 4.7e-14 83.2 69 65.2
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 1.1e-07 62.0 56 53.6
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 1.1e-07 62.0 162 30.2


User provided reference genes

Program Settings