Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 0.0e+00 1111.3 727 100.0
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.3e-307 1059.3 726 90.6
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 6.3e-156 555.4 668 47.5
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 6.7e-150 535.4 390 66.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 2.8e-148 530.0 387 65.6
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.8e-148 529.3 389 66.3
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 2.6e-146 523.5 387 65.1
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.2e-143 514.6 666 46.2
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.2e-143 514.6 389 64.0
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 5.7e-141 505.8 390 63.6
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 8.2e-140 501.9 387 61.8
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 8.2e-140 501.9 393 62.8
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 7.0e-139 498.8 380 62.9
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.0e-138 497.3 389 63.2
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 5.9e-138 495.7 388 62.9
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 3.8e-137 493.0 390 61.8
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 8.0e-135 485.3 365 64.7
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 4.1e-131 473.0 360 61.1
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.6e-130 471.1 359 61.3
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.5e-125 454.5 349 61.9
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.4e-123 448.0 352 60.2
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 1.0e-121 441.8 360 59.7
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.3e-121 440.7 390 57.2
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.1e-120 438.3 354 58.2
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 3.3e-120 436.8 345 60.3
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 1.2e-119 434.9 381 55.6
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.2e-119 434.9 343 57.7
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.6e-119 434.5 343 57.4
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.8e-119 433.7 334 59.3
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 3.6e-119 433.3 343 57.7
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 6.1e-119 432.6 382 55.8
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 1.0e-118 431.8 338 60.1
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.3e-118 430.6 367 57.5
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 8.9e-118 428.7 358 55.9
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 7.5e-117 425.6 352 57.7
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 9.8e-117 425.2 349 56.4
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 2.2e-116 424.1 390 55.6
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 2.8e-116 423.7 343 58.6
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 3.7e-116 423.3 353 56.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.4e-115 420.6 342 57.3
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.2e-115 420.2 313 64.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 5.4e-115 419.5 368 54.6
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.2e-114 418.3 385 55.3
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.7e-114 417.2 346 57.8
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 5.9e-114 416.0 337 57.6
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.0e-113 415.2 330 59.4
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 1.3e-113 414.8 371 53.1
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.3e-113 414.8 336 58.6
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 1.7e-113 414.5 377 56.0
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 3.9e-113 413.3 388 54.1
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.5e-112 411.4 373 53.9
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 7.3e-112 409.1 354 55.1
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.3e-112 409.1 368 54.6
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.6e-111 407.9 389 50.9
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.6e-111 407.9 313 62.6
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.7e-111 406.4 354 55.4
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.4e-110 404.8 365 52.6
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.0e-109 401.0 312 58.7
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 2.6e-109 400.6 311 60.5
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 3.4e-109 400.2 370 53.5
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 3.4e-109 400.2 376 52.1
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 4.4e-109 399.8 354 55.1
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 5.8e-109 399.4 337 55.5
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 9.8e-109 398.7 376 52.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.3e-108 398.3 358 53.9
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.7e-108 397.9 350 54.3
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 4.9e-108 396.4 300 59.0
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 6.4e-108 396.0 394 52.0
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 4.1e-107 393.3 333 55.6
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 4.1e-107 393.3 348 53.4
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 2.7e-106 390.6 388 50.8
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 3.5e-106 390.2 395 52.2
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.6e-106 389.8 404 48.3
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 6.0e-106 389.4 295 59.3
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.0e-105 388.7 330 55.5
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 3.3e-104 383.6 375 52.5
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 3.3e-104 383.6 327 53.2
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 9.5e-104 382.1 377 52.3
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 3.6e-103 380.2 358 51.1
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.4e-102 378.3 343 53.6
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 3.4e-101 373.6 356 52.5
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.9e-99 367.9 389 48.1
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 9.2e-99 365.5 328 53.4
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.2e-98 365.2 341 51.9
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.6e-98 364.8 351 52.7
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.1e-98 364.4 365 48.8
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 2.3e-97 360.9 359 49.9
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 6.6e-97 359.4 391 49.1
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 8.6e-97 359.0 362 48.3
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-96 358.6 371 48.8
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.9e-96 357.8 391 49.1
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.9e-96 357.8 385 49.1
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.9e-96 357.8 362 48.1
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 5.6e-96 356.3 354 50.8
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 7.3e-96 355.9 382 49.5
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 9.5e-96 355.5 374 49.7
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.2e-95 355.1 382 48.2
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.8e-95 354.0 432 44.2
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.8e-94 351.3 336 51.8
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 2.3e-94 350.9 367 48.5
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 3.1e-94 350.5 361 47.9
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.1e-94 350.5 345 48.4
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 2.0e-93 347.8 352 50.3
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 3.4e-93 347.1 351 50.1
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 9.9e-93 345.5 336 51.2
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 9.9e-93 345.5 366 47.0
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.9e-92 344.0 377 45.9
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 4.9e-92 343.2 242 65.7
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.2e-90 338.6 272 58.1
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.2e-90 338.6 369 46.9
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 3.0e-89 334.0 343 49.9
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.1e-88 332.0 381 47.0
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-88 331.6 361 45.7
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.3e-88 330.1 369 45.5
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 5.6e-88 329.7 337 47.2
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 9.6e-88 328.9 381 46.2
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 9.6e-88 328.9 378 46.6
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 9.6e-88 328.9 361 45.4
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.1e-87 327.8 354 46.6
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.8e-87 327.4 361 45.2
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 3.6e-87 327.0 343 49.3
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 3.1e-86 323.9 281 53.7
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 8.9e-86 322.4 304 49.7
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 4.4e-85 320.1 343 47.5
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 4.4e-85 320.1 379 43.8
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 7.6e-85 319.3 393 43.0
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 9.9e-85 318.9 286 51.4
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 1.3e-84 318.5 377 43.5
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 2.9e-84 317.4 357 45.4
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 4.2e-83 313.5 357 44.8
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 5.4e-83 313.2 356 45.2
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 5.4e-83 313.2 356 45.2
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 9.3e-83 312.4 300 51.7
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 3.5e-82 310.5 356 44.9
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 1.1e-80 305.4 374 44.1
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.9e-80 304.7 338 44.1
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 3.1e-78 297.4 391 40.9
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.7e-74 284.3 328 42.7
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 3.5e-74 283.9 228 59.2
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.9e-70 269.6 334 41.6
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 1.7e-68 265.0 319 42.9
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.0e-65 255.8 300 44.3
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.3e-65 255.4 318 41.2
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-65 255.0 322 41.3
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.0e-65 254.2 318 40.9
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.5e-64 251.9 318 40.9
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.3e-64 250.8 315 41.3
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.0e-61 241.5 321 36.4
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 3.8e-60 237.3 290 42.4
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.1e-59 235.7 189 55.0
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.3e-55 222.2 316 37.7
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 2.1e-55 221.5 319 39.2
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 4.5e-53 213.8 338 34.6
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 2.5e-51 208.0 272 38.6
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.9e-50 203.0 191 46.1
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.0e-49 202.6 207 47.8
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 4.3e-48 197.2 278 36.7
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.1e-46 192.6 262 38.2
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.1e-46 192.6 262 38.2
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.6e-42 178.7 154 55.2
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.3e-39 169.1 134 56.0
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 4.5e-37 160.6 129 55.8
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.0e-36 159.5 135 57.0
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.4e-32 144.1 118 59.3
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.2e-28 131.7 134 49.3
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 5.0e-28 130.6 228 32.9
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.9e-27 128.6 113 54.9
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.2e-26 125.9 84 64.3
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.8e-23 114.8 164 33.5
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 4.8e-23 114.0 88 54.5
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 2.9e-20 104.8 189 29.6
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 9.8e-16 89.7 60 63.3
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.5e-13 80.9 64 56.2
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 5.2e-09 67.4 68 50.0
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.1e-06 59.7 101 34.7


User provided reference genes

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